For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PLTVELDRSSPVPLYYQLAQAIEAAIRGGELAPGDRFENELALAKRLTLSRPTTRRAIQELVDKGLLVRK RGVGTQVVQNPVHRRVELTSLFDDLARAGQEPTTRLLEYHVGPPDEDVARELNLAEGRDVASIRRLRCAN GEPLALMTNYLPAEIAPDAEELESNGLYQSLRARGVHIRLARQRIGARSATRAEASLLDEKPNAPLLTMA RTAFDDSGAAVEFGNHCYRASRYYFDTTLVDR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4015 | - | - | 100% (243) | UbiC transcription regulator-associated domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_2288 | - | 2e-30 | 36.91% (233) | UbiC transcription regulator-associated domain-containing |
| M. vanbaalenii PYR-1 | Mvan_3927 | - | 1e-21 | 33.19% (238) | UbiC transcription regulator-associated domain-containing |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0816c | - | 3e-22 | 33.05% (236) | GntR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2603 | - | 1e-129 | 95.06% (243) | UbiC transcription regulator-associated domain-containing |
| M. tuberculosis H37Rv | Rv0792c | - | 3e-22 | 33.05% (236) | GntR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0953 | - | 9e-24 | 33.89% (239) | GntR family transcriptional regulator |
| M. marinum M | MMAR_4842 | - | 7e-21 | 27.42% (248) | regulatory protein |
| M. avium 104 | MAV_0738 | - | 2e-17 | 30.00% (260) | mercuric reductase/transcriptional regulator, fusion |
| M. smegmatis MC2 155 | MSMEG_4659 | - | 1e-100 | 75.52% (241) | GntR-family protein transcriptional regulator |
| M. thermoresistible (build 8) | TH_3932 | - | 3e-14 | 28.02% (232) | PUTATIVE transcriptional regulator, GntR family |
| M. ulcerans Agy99 | MUL_0525 | - | 9e-23 | 29.03% (248) | transcriptional regulatory protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_4015|M.vanbaalenii_PYR-1 MP--LTVELDRSSP------VPLYYQLAQAIEAAIRGGELAPGDRFENEL
Mflv_2603|M.gilvum_PYR-GCK MP--LTVELDRSSP------VPLYYQLAQAIEAAIRDGELAPGDRFENEL
MSMEG_4659|M.smegmatis_MC2_155 MTPTLSVELDRSSP------VPLYFQVAQVFEKAILDGQLKPGDRFENEL
Mb0816c|M.bovis_AF2122/97 MTS-VKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSER
Rv0792c|M.tuberculosis_H37Rv MTS-VKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSER
MAV_0738|M.avium_104 MVP-DQLDLDAADLRISRGSVPASTQLAEALKAAIVKQRLPRGARLPTER
MMAR_4842|M.marinum_M MEGCRVLQLGQIDR---TDDKPPYRQIASMLREAISSSRFPPGERLPSEA
MUL_0525|M.ulcerans_Agy99 MEGSQVLQLGQIDR---ADDKPPYRQIASMLRGAIISGELEAGGRLPSEA
MAB_0953|M.abscessus_ATCC_1997 --------MEESEG------GPVAEDVRRRILSMLAQGTLHPGSRLGSER
TH_3932|M.thermoresistible__bu --MTRTATPMRSTTINRFADRPLYRQLSEVLEARLIER-ARPGDRLPSEA
* :: : : * *: .*
Mvan_4015|M.vanbaalenii_PYR-1 ALAKRLTLSRPTTRRAIQELVDKGLLVRKRGVG--TQVVQN---------
Mflv_2603|M.gilvum_PYR-GCK ALAKRLTLSRPTTRRAIQELVDKGLLVRKRGVG--TQVVQN---------
MSMEG_4659|M.smegmatis_MC2_155 ALASRLNLSRPTTRRAIQELVDKGLLVRKRGVG--TQVVQT---------
Mb0816c|M.bovis_AF2122/97 ELIDRSGLSRVTVRAAVGMLQRQGWLVRRQGLG--TFVADP---------
Rv0792c|M.tuberculosis_H37Rv ELIDRSGLSRVTVRAAVGMLQRQGWLVRRQGLG--TFVADP---------
MAV_0738|M.avium_104 ELVDRTRVSRVTVRAAVGLLERQGWLVRRQGLG--TFVANP---------
MMAR_4842|M.marinum_M ELIEHFGVARMTVRQAMQELRSDGLVISQHGRG--VFVRPTPPIRRLASD
MUL_0525|M.ulcerans_Agy99 ELIEYFGVARMTVRQAVQELRTEGLVISEHGRG--VFVRPAPPIRWLASD
MAB_0953|M.abscessus_ATCC_1997 EMAERFAVSRATVRSALVPLSRAGILERQTGRGGGTFVRAD---------
TH_3932|M.thermoresistible__bu ELSGQFGVNRLTVRRALHELAQRGIIETVHGRG--SFVARQP--------
: : * *.* *: * * : * * *
Mvan_4015|M.vanbaalenii_PYR-1 --PVHRR-VELTSLFDDLARAGQEPTTRLLEYHVGPPDEDVARELNLAEG
Mflv_2603|M.gilvum_PYR-GCK --PVHRR-VELTSLFDDLARAGQEPTTRLLKYHIGPPDEDVARELNLAEG
MSMEG_4659|M.smegmatis_MC2_155 --PVHRP-VELTSLYDDLARAGQEPATEVLEYTRRPAQADIAERLSIEPG
Mb0816c|M.bovis_AF2122/97 --VEQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGLV--
Rv0792c|M.tuberculosis_H37Rv --VEQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGLV--
MAV_0738|M.avium_104 --VKQELGPGVRTITEVLAASGITPNVDVLSHRVEDAPQRIAETLHLT--
MMAR_4842|M.marinum_M RFARQHRAEGKAAFSVEAEKSGYSPQVDNIAVSREKPNSFIAEQLRISAD
MUL_0525|M.ulcerans_Agy99 RFARQHRANGKAAFTVEAERSGHTPQVDNITVSREKPDSVVAERLRLTAD
MAB_0953|M.abscessus_ATCC_1997 --VVQRNVAELVGLPTRLHIGGHTSDTRVLGTSRRPATAAERAALEIAEG
TH_3932|M.thermoresistible__bu -VRYRLSATRDASFTRGMRELGHPVRIEVLGAETTRCRRLRTELHTAG--
: : * :
Mvan_4015|M.vanbaalenii_PYR-1 RDVASIRRLRCANGEPLALMTNYLPAEIAPDAEELESNGLYQSL------
Mflv_2603|M.gilvum_PYR-GCK REVASIQRLRCANGEPLALMTNHLPADIAPDAEELGNIGLYQAL------
MSMEG_4659|M.smegmatis_MC2_155 SEIAYMRRLRSSNGQPLALMTNYLPAALAPDEDELARSGLYQSL------
Mb0816c|M.bovis_AF2122/97 -EVLCIRRRIRTGDQPLALVTAYLPPGVGPAVEPLLSGSADTET------
Rv0792c|M.tuberculosis_H37Rv -EVLCIRRRIRTGDQPLALVTAYLPPGVGPAVEPLLSGSADTET------
MAV_0738|M.avium_104 -KVLCVHRRFRDGEQPLALMIAYLPPGLGEAVEPLLKSATDTQTGRAMES
MMAR_4842|M.marinum_M DDIVVRSRRYLANGRPVETAVSYIPAAFAEGTRIEQVDTGPGGIYAR---
MUL_0525|M.ulcerans_Agy99 DEVVVRSRRYLADGKPVETATSYIPVAFAQGTKIEQTDTGPGGIYAR---
MAB_0953|M.abscessus_ATCC_1997 AEVFDVRRLRYADGVPLSVDTAYFPAELVPDLLEQPLGGSLYELC-----
TH_3932|M.thermoresistible__bu -EVLTTTTLRHVDGQPWSVSVTSIALDRFPGIAQQWSGSTSLFDFLW---
.: . * :.
Mvan_4015|M.vanbaalenii_PYR-1 ------RARGVHIRLARQRIGARSATRAEASLLDEKPNAPLLTMARTAFD
Mflv_2603|M.gilvum_PYR-GCK ------RARGVHIRLARQRIGARSATRAEAHLLDEKPNAPLLTMARTAFD
MSMEG_4659|M.smegmatis_MC2_155 ------RARGVHIRLARQRIGAKAADREEARLLDEKPKAPLLVMERTAFD
Mb0816c|M.bovis_AF2122/97 TYAMWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYT
Rv0792c|M.tuberculosis_H37Rv TYAMWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYT
MAV_0738|M.avium_104 TYTMWERRLDTPIARASYEIHAAGASVEVAGALNLPLGSPVLVLERTSYG
MMAR_4842|M.marinum_M -----LEEHGHVLARFTEEVAARMPTPEERRQLELDSGVPVLTVLRTAYD
MUL_0525|M.ulcerans_Agy99 -----FEEAGHTLARFNEEVGARMPTPEERRALQLPPGAPVLTVVRTAYD
MAB_0953|M.abscessus_ATCC_1997 -----QVRYGLQADSSTETIEVVSANPREAEWLDVPHRRPLLAITRVTRN
TH_3932|M.thermoresistible__bu ------QTFGVRMRRAYRSFSAVLADLAEAQHLGLRTGAPVLEMRGLNVD
. . . . * *:* :
Mvan_4015|M.vanbaalenii_PYR-1 DSGAAVEFGNHCYRASRYYFDTTLVDR-----------------------
Mflv_2603|M.gilvum_PYR-GCK DSGAAVEFGNHCYRASRYYFDTTLVDR-----------------------
MSMEG_4659|M.smegmatis_MC2_155 DSGRIVEYGSHAYRASRYYFDTTLVDR-----------------------
Mb0816c|M.bovis_AF2122/97 NDGKPLEVVVFHHRPERYQFSVTLPRTLPGSGAGIIEKRDFA--------
Rv0792c|M.tuberculosis_H37Rv NDGKPLEVVVFHHRPERYQFSVTLPRTLPGSGAGIIEKRDFA--------
MAV_0738|M.avium_104 HDDTPLEVVEFHYRPERYRFSVTLPRTVPGPGAGIVERSG----------
MMAR_4842|M.marinum_M TNDVAVEVCDTVKVASAYLLEYEFPAR-----------------------
MUL_0525|M.ulcerans_Agy99 TKDVAVEVCDTVKVASAYLLEYDFSAR-----------------------
MAB_0953|M.abscessus_ATCC_1997 TDGRPFEFSYDLFRADRVRLTATMTSAVAQESRGVDGKVERVVSRLAAHR
TH_3932|M.thermoresistible__bu QHGAPVAVVRHRFRGDRVELTVDLA-------------------------
. . . : :
Mvan_4015|M.vanbaalenii_PYR-1 --------
Mflv_2603|M.gilvum_PYR-GCK --------
MSMEG_4659|M.smegmatis_MC2_155 --------
Mb0816c|M.bovis_AF2122/97 --------
Rv0792c|M.tuberculosis_H37Rv --------
MAV_0738|M.avium_104 --------
MMAR_4842|M.marinum_M --------
MUL_0525|M.ulcerans_Agy99 --------
MAB_0953|M.abscessus_ATCC_1997 RPDDTLLA
TH_3932|M.thermoresistible__bu --------