For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3956 | - | - | 100% (270) | putative short-chain dehydrogenase/reductase SDR |
| M. thermoresistible (build 8) | TH_4608 | - | 1e-30 | 36.50% (274) | PUTATIVE short-chain dehydrogenase/reductase SDR |
| M. thermoresistible (build 8) | TH_3708 | - | 2e-22 | 27.65% (264) | PUTATIVE short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2788c | fabG | 2e-25 | 32.95% (264) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. gilvum PYR-GCK | Mflv_4353 | - | 6e-33 | 37.41% (270) | short-chain dehydrogenase/reductase SDR |
| M. tuberculosis H37Rv | Rv2766c | fabG | 2e-25 | 32.95% (264) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. leprae Br4923 | MLBr_00862 | ephD | 3e-13 | 30.00% (190) | short chain dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0827 | - | 4e-20 | 30.34% (267) | putative short-chain dehydrogenase/reductase |
| M. marinum M | MMAR_1568 | - | 9e-36 | 37.45% (275) | short-chain type dehydrogenase/reductase |
| M. avium 104 | MAV_1891 | - | 7e-50 | 43.98% (266) | short-chain dehydrogenase/reductase SDR |
| M. smegmatis MC2 155 | MSMEG_2228 | - | 1e-32 | 36.76% (272) | oxidoreductase, short chain dehydrogenase/reductase family |
| M. ulcerans Agy99 | MUL_2173 | fabG | 3e-24 | 31.06% (264) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. vanbaalenii PYR-1 | Mvan_1991 | - | 1e-30 | 36.26% (273) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 MPATQSIHKVPHQFVESPDGVRLAIYQSGQPEGPAIVLVHGFPDSHVLWD
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 GVVPLLAKRFRIVRYDNRGVGQSSVPKPVSAYTMTRFADDFAAVIDELSP
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 DRPVHVLAHDWGSVGVWEYLSRSGASDRVASFTSVSGPSQDQLVDYILSG
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 LRRPWRPRTFARAVSQLFRLTYMVLFSIPVLVPMVLWIALSSATIRRTMV
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 DNISTDQIHHSATLARDAAHSVKTYPANYFRAFSGRRRGKGVPVVNVPVQ
TH_3956|M.thermoresistible__bu --------------------------------------------------
MAV_1891|M.avium_104 --------------------------------------------------
Mflv_4353|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1991|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2228|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_1568|M.marinum_M --------------------------------------------------
Mb2788c|M.bovis_AF2122/97 --------------------------------------------------
Rv2766c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2173|M.ulcerans_Agy99 --------------------------------------------------
MAB_0827|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00862|M.leprae_Br4923 LIVNTMDRYVRPYGYDATARWVPRLWRRDIKAGHFSPMSHPQVMAAAVHD
TH_3956|M.thermoresistible__bu ---------------------MDLGLSGRNFVIVGGTTGMGYAAAEQLAR
MAV_1891|M.avium_104 ---------------------MDLQIRDKAFVIVGGTAGMGLAGAKALAA
Mflv_4353|M.gilvum_PYR-GCK ---------------------MDLGLRDATVVVVGGGRGMGLAAAHCFAD
Mvan_1991|M.vanbaalenii_PYR-1 ---------------------MDLGLRDATAVVVGGGRGMGLAAAHCFAD
MSMEG_2228|M.smegmatis_MC2_155 ---------------------MDLGFGGAAAAVVGGGRGMGFATAQCLAD
MMAR_1568|M.marinum_M ---------------------MDLGFSGSKAVVTGGSKGMGLAIAETLAA
Mb2788c|M.bovis_AF2122/97 --------------------MTSLDLTGRTAIITGASRGIGLAIAQQLAA
Rv2766c|M.tuberculosis_H37Rv --------------------MTSLDLTGRTAIITGASRGIGLAIAQQLAA
MUL_2173|M.ulcerans_Agy99 --------------------MTSLDLTGRTAIITGASRGIGLAIAQRLAG
MAB_0827|M.abscessus_ATCC_1997 ---------------------MTSPLKSRRAFVTGGSRGIGAGIVRRLAE
MLBr_00862|M.leprae_Br4923 LADLVDGKQPSRALLRAQVGRSRDTFGDTLVSVTGAGSGIGRETALALAR
: . :.*. *:* . :*
TH_3956|M.thermoresistible__bu DGANVALLARDGDRATERAAGLAEQHGVRAVGISVDAAATGDGVRHAIDE
MAV_1891|M.avium_104 EGAAVAVIGRDKTRAKDAAALLSEAGAVGAHGLSFDVGRSGEAV-MAVEA
Mflv_4353|M.gilvum_PYR-GCK DGARVALVGRTRDVLDEAAAQLRGRGSPDAVGVVADCADEAAVQRAFGEL
Mvan_1991|M.vanbaalenii_PYR-1 DGARVALIGRSPEVLDGAAAQLRERGSPDAVGVVADTTDDAAVRRAFAEL
MSMEG_2228|M.smegmatis_MC2_155 DGARVAVIGRSKDVLETAASDLARRGSPDAIAIVADTGDAEQVERAFAEI
MMAR_1568|M.marinum_M EGASVAVIARGKRALDSAVERLSQAGAPDAVAISADMADAASITSAFAAV
Mb2788c|M.bovis_AF2122/97 AGAHVVLTARRQEAADEAAAQVGDR----ALGVGAHAVD-EDAARRCVDL
Rv2766c|M.tuberculosis_H37Rv AGAHVVLTARRQEAADEAAAQVGDR----ALGVGAHAVD-EDAARRCVDL
MUL_2173|M.ulcerans_Agy99 AGANVVLTARKQESADAAAAEVGER----AVGVGAHAVD-EEAARGCVDL
MAB_0827|M.abscessus_ATCC_1997 DGARVVFTYSSSVQQAADVVDDINEDGGWARAVKADVAD-PDQLGAAIGQ
MLBr_00862|M.leprae_Br4923 RGAEVVVSDIDEAAAKNTAAQIVASGG-VAYAYALDVSD-AAAVEAFAEQ
** *.. . * . .
TH_3956|M.thermoresistible__bu AAERLGPLRGLAVTAGPMKQQGPFLEHADDSWDWYYQTILMATVRSCRAV
MAV_1891|M.avium_104 AVDLLGRLDGIAVTMGTAGMMP--IDSDDDAWDAAFHDVLLATTRSVQAA
Mflv_4353|M.gilvum_PYR-GCK AERWNGELNVLVNAVG-PTVRGTFDELSDADWRQAVDEGAMGMVRCVRAA
Mvan_1991|M.vanbaalenii_PYR-1 GERWNGELNILVNAVG-PTVRGTFDELTDADWRQAVDEGAMGMVHCVRAA
MSMEG_2228|M.smegmatis_MC2_155 GERWDGELNVLINTVG-PGAAGDFEELTDGQWQEAFDAGVMGMVRCVRAA
MMAR_1568|M.marinum_M SERW-GQLNCLVHTIG-PGD-GYFEELDDAAWDAAFTLGTMSGVRAIRAA
Mb2788c|M.bovis_AF2122/97 TLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLV
Rv2766c|M.tuberculosis_H37Rv TLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLV
MUL_2173|M.ulcerans_Agy99 ALERFGSVDILINNAGTNPAYGPLIEQDHARFTKIFDVNLWAPLMWTSLV
MAB_0827|M.abscessus_ATCC_1997 AAEELGGLDILVNNAG-ILSIGDVDTATLADFDEIVAVNVRAVFAGIKAA
MLBr_00862|M.leprae_Br4923 VSAKHGVPDIVVNNAG-IGQAGRFLDTPPEEFDRVLAVNLGGVVNCCRAF
* : * : .
TH_3956|M.thermoresistible__bu IPHLQRNGGGTIVTTAAYSVRA-PKILIPPYNALKAAVLTLSKILAKTHG
MAV_1891|M.avium_104 LPHLALTKG-AIVTTAAYSARS-PHEPRLPYASLKAAVATFTRGIARTHG
Mflv_4353|M.gilvum_PYR-GCK LPLLRAAEWARIVNFSAHSTQR-QSVILPAYTAAKAMVTSISKNLSLLLA
Mvan_1991|M.vanbaalenii_PYR-1 LPLLRAAEWARIVNFSAHSTQR-QSVILPAYTAAKAMVTSISKNLSLLLA
MSMEG_2228|M.smegmatis_MC2_155 LPLLRKAEWARIVNFSAHSTQR-QSTRLPAYTAAKAAVNSVSKNLSLLLA
MMAR_1568|M.marinum_M LPLLRAADWARVVTLSAHSIQR-QNPRLVAYTASKAALSSVTKNLSKSLA
Mb2788c|M.bovis_AF2122/97 VTAWMGEHGGAVVNTASIGGMH-QSPAMGMYNATKAALIHVTKQLALELS
Rv2766c|M.tuberculosis_H37Rv VTAWMGEHGGAVVNTASIGGMH-QSPAMGMYNATKAALIHVTKQLALELS
MUL_2173|M.ulcerans_Agy99 VKAWMGEHGGVVINTASIGGMH-QSPAMGMYNATNAALIHVTKQLALELS
MAB_0827|M.abscessus_ATCC_1997 SPHLT--EGGRIVTIGSINGDSSPTANLSLYSMTKAAVAGLTRGLAREFG
MLBr_00862|M.leprae_Br4923 GQRLVERGTGGHIVNVSSMAAYAPLQSLSAYCTSKAATYMFSDCLRAELD
: : * :* .: :
TH_3956|M.thermoresistible__bu AEGIRVNTVCPGLFDTEVNDFIRAQRAAEYNVAEEDAIYTHLSSNPAWNM
MAV_1891|M.avium_104 KDGIRANCVAPGAVETDALHAIRGYVAESKGYPYEEALERALRED--FGF
Mflv_4353|M.gilvum_PYR-GCK RDEILVNVVSPGSIA----SEALVGWADSVGVDGSDPYALMAAIDEHFGH
Mvan_1991|M.vanbaalenii_PYR-1 RDEILVNVVSPGSIA----SEALLGWADSVGVDGSDPYALMAAIDEHFGH
MSMEG_2228|M.smegmatis_MC2_155 KDEIMVNVVSPGSIS----SEALVGWAESVGVDGSDPYQLMAAIDEHFGH
MMAR_1568|M.marinum_M KEGILVNCVCPGTIVTASFTEQLKDLLAADGLDATNPYDVMAWIDKYFHQ
Mb2788c|M.bovis_AF2122/97 PR-IRVNAICPGVVR--------TRLAEALWKDHEDP----------LAA
Rv2766c|M.tuberculosis_H37Rv PR-IRVNAICPGVVR--------TRLAEALWKDHEDP----------LAA
MUL_2173|M.ulcerans_Agy99 PR-VRVNAICPGVVR--------TKLAEALWKDHEDP----------LAA
MAB_0827|M.abscessus_ATCC_1997 PRGITINNVQPGPIG--------TDMNPEDGQ-----------LADILRP
MLBr_00862|M.leprae_Br4923 AVGVGLTTICPGVIDTNIIQSTRIDTPTAKQERVRDR-------RGQLDM
: . : ** .
TH_3956|M.thermoresistible__bu RVALDRGGRPHEAGELIAFLLSDRAAYTTGAAINIDGGTDF---------
MAV_1891|M.avium_104 DAALNRPGRPDEIGALIAFLLSDVCGFVTGQTIYADGGAP----------
Mflv_4353|M.gilvum_PYR-GCK PAHLPRAGLPTEIGSVVAFLASRRNSYMTGADINVDGGSDFT--------
Mvan_1991|M.vanbaalenii_PYR-1 PAHLPRAGLPTEIGPVVAFLASRRNSYMTGANINVDGGSDFT--------
MSMEG_2228|M.smegmatis_MC2_155 PAHLPRAGLPSEIGPVAAFLASRRNSYMTGANINVDGGSDFT--------
MMAR_1568|M.marinum_M PCDLGRAGLPEEVASITAYLVSRRNGYVTGATVNADGGSDFI--------
Mb2788c|M.bovis_AF2122/97 TIALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAA
Rv2766c|M.tuberculosis_H37Rv TIALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAA
MUL_2173|M.ulcerans_Agy99 NIALGRIGEPVDVAEAVGFLVSDAASWITGETMVIDGGLLLGSAAGFQSR
MAB_0827|M.abscessus_ATCC_1997 NIAVGRYGQPRDIASLVSYLVSDEAWYITGTAINIDGGFTA---------
MLBr_00862|M.leprae_Br4923 MFRLRRYGPDKVADTILSAIKKNKPIRPVAPEAYALYGISRVLPQVLRST
: * * . : . .. *
TH_3956|M.thermoresistible__bu ------
MAV_1891|M.avium_104 ------
Mflv_4353|M.gilvum_PYR-GCK ------
Mvan_1991|M.vanbaalenii_PYR-1 ------
MSMEG_2228|M.smegmatis_MC2_155 ------
MMAR_1568|M.marinum_M ------
Mb2788c|M.bovis_AF2122/97 PSTEH-
Rv2766c|M.tuberculosis_H37Rv PSTEH-
MUL_2173|M.ulcerans_Agy99 PGSAS-
MAB_0827|M.abscessus_ATCC_1997 ------
MLBr_00862|M.leprae_Br4923 ARIRVI