For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_4353 (-)

annotation: short-chain dehydrogenase/reductase SDR
coordinates: 4629760 - 4630557
length: 265

DLGLRDATVVVVGGGRGMGLAAAHCFADDGARVALVGRTRDVLDEAAAQLRGRGSPDAVGVVADCADEAA
VQRAFGELAERWNGELNVLVNAVGPTVRGTFDELSDADWRQAVDEGAMGMVRCVRAALPLLRAAEWARIV
NFSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLARDEILVNVVSPGSIASEALVGWADSVGVDGSDPY
ALMAAIDEHFGHPAHLPRAGLPTEIGSVVAFLASRRNSYMTGADINVDGGSDFT*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_4353--100% (265)short-chain dehydrogenase/reductase SDR
M. gilvum PYR-GCKMflv_1258-1e-2432.68% (254) short-chain dehydrogenase/reductase SDR
M. gilvum PYR-GCKMflv_2469-2e-2430.95% (252) short-chain dehydrogenase/reductase SDR

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2788cfabG8e-2331.15% (260) 3-ketoacyl-(acyl-carrier-protein) reductase
M. tuberculosis H37RvRv2766cfabG8e-2331.15% (260) 3-ketoacyl-(acyl-carrier-protein) reductase
M. leprae Br4923MLBr_01807fabG14e-1629.53% (254) 3-oxoacyl-
M. abscessus ATCC 19977MAB_4632-3e-2231.47% (251) short chain dehydrogenase
M. marinum MMMAR_1568-3e-6951.49% (268) short-chain type dehydrogenase/reductase
M. avium 104MAV_1587-1e-11776.60% (265) oxidoreductase, short chain dehydrogenase/reductase family
M. smegmatis MC2 155MSMEG_2228-1e-11676.23% (265) oxidoreductase, short chain dehydrogenase/reductase family
M. thermoresistible (build 8)TH_4608-1e-12381.44% (264) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_0315fabG22e-2331.92% (260) 3-oxoacyl-
M. vanbaalenii PYR-1Mvan_1991-1e-13892.45% (265) short-chain dehydrogenase/reductase SDR

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4353|M.gilvum_PYR-GCK          --------------MDLGLRDATVVVVGGGRGMGLAAAHCFADDGARVAL
Mvan_1991|M.vanbaalenii_PYR-1       --------------MDLGLRDATAVVVGGGRGMGLAAAHCFADDGARVAL
TH_4608|M.thermoresistible__bu      --------------MDLGFTDAAAVVVGGGRGMGLAAAQCLADDGARVAV
MSMEG_2228|M.smegmatis_MC2_155      --------------MDLGFGGAAAAVVGGGRGMGFATAQCLADDGARVAV
MAV_1587|M.avium_104                --------------MDLGLANAAAVVVGGSRGMGLATARCLADEGARVAV
MMAR_1568|M.marinum_M               --------------MDLGFSGSKAVVTGGSKGMGLAIAETLAAEGASVAV
MLBr_01807|M.leprae_Br4923          MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV
MUL_0315|M.ulcerans_Agy99           ---------MRPD-SSPSWCTITSVVTGGASGIGLAIARRLSADGTDVAT
Mb2788c|M.bovis_AF2122/97           -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL
Rv2766c|M.tuberculosis_H37Rv        -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL
MAB_4632|M.abscessus_ATCC_1997      -----------MILDRFKLDGNVAVVTGAGRGLGAAIAEAFAQAGADVLI
                                                             :.*.  *:* * *. :   *  *  

Mflv_4353|M.gilvum_PYR-GCK          VGRTRDVLDEAAAQLRGRGSPDAVGVVADCADEAAVQRAFGELAERWNGE
Mvan_1991|M.vanbaalenii_PYR-1       IGRSPEVLDGAAAQLRERGSPDAVGVVADTTDDAAVRRAFAELGERWNGE
TH_4608|M.thermoresistible__bu      IGRTRSMLDEAAADLARRGSPDALGIVADIRDEQQVERVFAELGERWQGE
MSMEG_2228|M.smegmatis_MC2_155      IGRSKDVLETAASDLARRGSPDAIAIVADTGDAEQVERAFAEIGERWDGE
MAV_1587|M.avium_104                IGRSRDALDSAVTDLTRRGSPDALGLVADIGDDAAVGQAFGELARRWDGE
MMAR_1568|M.marinum_M               IARGKRALDSAVERLSQAGAPDAVAISADMADAASITSAFAAVSERWG-Q
MLBr_01807|M.leprae_Br4923          THRASVVPDWF------------FGVECDVTDNDAIGAAFKAVEEHQG-P
MUL_0315|M.ulcerans_Agy99           LDLK--TPDGG------------LAFSADVTNRSQVDAALAAIRQRLG-P
Mb2788c|M.bovis_AF2122/97           TARRQEAADEAAAQVGDR----ALGVGAHAVDEDAARRCVDLTLERFGSV
Rv2766c|M.tuberculosis_H37Rv        TARRQEAADEAAAQVGDR----ALGVGAHAVDEDAARRCVDLTLERFGSV
MAB_4632|M.abscessus_ATCC_1997      ASRTESQLREVAAKVQAAGR-QAEVVVADLSDTEASAALAQKAVDRFGRL
                                                             . ..  :             :    

Mflv_4353|M.gilvum_PYR-GCK          LNVLVNAVGPTVRGTFDELSDADWRQAVDEGAMGMVRCVRAALPLLRAAE
Mvan_1991|M.vanbaalenii_PYR-1       LNILVNAVGPTVRGTFDELTDADWRQAVDEGAMGMVHCVRAALPLLRAAE
TH_4608|M.thermoresistible__bu      LNVLINTVGPAVMGTVEELSDEQWRSAVDDGVLGMVHCVRSALPLLRQAE
MSMEG_2228|M.smegmatis_MC2_155      LNVLINTVGPGAAGDFEELTDGQWQEAFDAGVMGMVRCVRAALPLLRKAE
MAV_1587|M.avium_104                LNALVITVGPGAAGTFEDLTDEQWRQAVEDGVLGMVRCVRAALPLLRKAQ
MMAR_1568|M.marinum_M               LNCLVHTIGPGD-GYFEELDDAAWDAAFTLGTMSGVRAIRAALPLLRAAD
MLBr_01807|M.leprae_Br4923          VEVLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQR
MUL_0315|M.ulcerans_Agy99           VTILVNAAGLDGFKRFSNITFEDWQRVIDVNLNGVFHTIQAVLPDMVAAG
Mb2788c|M.bovis_AF2122/97           DILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEH
Rv2766c|M.tuberculosis_H37Rv        DILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEH
MAB_4632|M.abscessus_ATCC_1997      DVVVNNVGG-TMPKPFLDTTNDDLAEAFSFNVLSGHALLRAAVPHLLKSD
                                       :           .           .  .  .       .        

Mflv_4353|M.gilvum_PYR-GCK          WARIVNFSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLARDEILVNVV
Mvan_1991|M.vanbaalenii_PYR-1       WARIVNFSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLARDEILVNVV
TH_4608|M.thermoresistible__bu      WARIVNLSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLAKDEILVNVV
MSMEG_2228|M.smegmatis_MC2_155      WARIVNFSAHSTQRQSTRLPAYTAAKAAVNSVSKNLSLLLAKDEIMVNVV
MAV_1587|M.avium_104                WARIVNFSAHSTQRQSVLLPAYTAAKSMLTSVSKNLSLLLAKDEILVNVI
MMAR_1568|M.marinum_M               WARVVTLSAHSIQRQNPRLVAYTASKAALSSVTKNLSKSLAKEGILVNCV
MLBr_01807|M.leprae_Br4923          FGRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVV
MUL_0315|M.ulcerans_Agy99           WGRIVNISSSSTHSGTPYMTHYVAAKSAVNGLTKALALEYGPSGITVNAV
Mb2788c|M.bovis_AF2122/97           GGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAI
Rv2766c|M.tuberculosis_H37Rv        GGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAI
MAB_4632|M.abscessus_ATCC_1997      NASVINITSTMGRLPGRAFLGYCTAKGALAHYTRTAAMDLSPR-IRVNGI
                                     .  :   :            * ::*. :   ::  :   .   * .* :

Mflv_4353|M.gilvum_PYR-GCK          SPGSIAS----EALVGWADSVGVDGSDPYALMAAIDEHFGHPAHLPRAGL
Mvan_1991|M.vanbaalenii_PYR-1       SPGSIAS----EALLGWADSVGVDGSDPYALMAAIDEHFGHPAHLPRAGL
TH_4608|M.thermoresistible__bu      SPGSIAS----EALVGWADSIGVDGTDPYALMSAIDEHFGHPAHLPRAGL
MSMEG_2228|M.smegmatis_MC2_155      SPGSISS----EALVGWAESVGVDGSDPYQLMAAIDEHFGHPAHLPRAGL
MAV_1587|M.avium_104                SPGSIAS----ESLVGWANSVGVDGRDPYALMEAIGKHFGHPAHMPRAGL
MMAR_1568|M.marinum_M               CPGTIVTASFTEQLKDLLAADGLDATNPYDVMAWIDKYFHQPCDLGRAGL
MLBr_01807|M.leprae_Br4923          APGFIDT-----EMTRAMDSK----YQEAALQAIP---------LGRIGA
MUL_0315|M.ulcerans_Agy99           PPGFIDT-----PMLRNAAAQGHLGDIEQNIARTP---------VRRIGK
Mb2788c|M.bovis_AF2122/97           CPGVVRT--------RLAEALWKDHEDP--LAATIA--------LGRIGE
Rv2766c|M.tuberculosis_H37Rv        CPGVVRT--------RLAEALWKDHEDP--LAATIA--------LGRIGE
MAB_4632|M.abscessus_ATCC_1997      APGSILT--------SALEVVAGNDEMRNTLEQNTP--------LHRLGD
                                     ** : :                       :             : * * 

Mflv_4353|M.gilvum_PYR-GCK          PTEIGSVVAFLASRRNSYMTGADINVDGGSDFT-------------
Mvan_1991|M.vanbaalenii_PYR-1       PTEIGPVVAFLASRRNSYMTGANINVDGGSDFT-------------
TH_4608|M.thermoresistible__bu      PEEIGPVIAFLASRRNSYMTGANVNVDGGSDFV-------------
MSMEG_2228|M.smegmatis_MC2_155      PSEIGPVAAFLASRRNSYMTGANINVDGGSDFT-------------
MAV_1587|M.avium_104                PEEIGPVAAFLASRRNSYMTGANINVDGGSDFT-------------
MMAR_1568|M.marinum_M               PEEVASITAYLVSRRNGYVTGATVNADGGSDFI-------------
MLBr_01807|M.leprae_Br4923          VEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH------------
MUL_0315|M.ulcerans_Agy99           PEDIAAACAFLVSEEAGYITGQILGVNGGRNT--------------
Mb2788c|M.bovis_AF2122/97           PADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
Rv2766c|M.tuberculosis_H37Rv        PADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
MAB_4632|M.abscessus_ATCC_1997      PADIAAAAVYLASPAGSFLTGKVLEVDGGLIAPNLDIPLPDLA---
                                      ::.    :*.*   .:::*  :  :**