For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_4818 (-)

annotation: short-chain dehydrogenase/reductase SDR
coordinates: 5129008 - 5129778
length: 256

DRASFDRLFDMTDRTVVVTGGTRGIGLALAEGYALAGARVVVASRKADACEQAAHHLRELGAQAIGVPTH
LGQVDDLGALVERTVAEFGGLDVLVNNAANPLAQPFGHMTVDALSKSFEVNLQGPVMLTQEALPHLKASD
HAAVLNMVSVGAFIFAPMLSIYASMKAAMMSFTRSMAAEFVHDGIRVNALAPGPVDTDMMRKNPQEAIDG
MVGGTLVGRLASADEMVGAALLLTSDAGSYITGQVIIADGGGTPR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_4818--100% (256)short-chain dehydrogenase/reductase SDR
M. gilvum PYR-GCKMflv_1202-5e-3937.90% (248) short-chain dehydrogenase/reductase SDR
M. gilvum PYR-GCKMflv_1263-2e-3436.25% (251) short-chain dehydrogenase/reductase SDR

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2788cfabG3e-3735.80% (243) 3-ketoacyl-(acyl-carrier-protein) reductase
M. tuberculosis H37RvRv2766cfabG3e-3735.80% (243) 3-ketoacyl-(acyl-carrier-protein) reductase
M. leprae Br4923MLBr_01807fabG13e-2229.41% (238) 3-oxoacyl-
M. abscessus ATCC 19977MAB_0164-6e-8762.50% (248) short chain dehydrogenase/reductase
M. marinum MMMAR_4927-3e-3535.08% (248) dehydrogenase/reductase
M. avium 104MAV_3655fabG3e-3835.80% (243) 3-ketoacyl-(acyl-carrier-protein) reductase
M. smegmatis MC2 155MSMEG_1740-1e-10876.95% (256) dehydrogenase/reductase SDR family protein member 4
M. thermoresistible (build 8)TH_2589-1e-10876.95% (256) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_4384-1e-3636.14% (249) short-chain type dehydrogenase/reductase
M. vanbaalenii PYR-1Mvan_1624-1e-13392.97% (256) short-chain dehydrogenase/reductase SDR

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4818|M.gilvum_PYR-GCK          -------MDRASFDRLFDMTDRTVVVTGGTRGIGLALAEGYALAGARVVV
Mvan_1624|M.vanbaalenii_PYR-1       -------MDRASFDRLFDMTDRTVVVTGGTRGIGLALAEGYVLAGARVVV
MSMEG_1740|M.smegmatis_MC2_155      -------MDRQRFERLFDMSDRTVIVTGGTRGIGLSLAEGFVLAGARVVV
TH_2589|M.thermoresistible__bu      -------VDRQTFDKLFDMTGRTVVVTGGTRGIGLALAEGYVLAGARVVV
MAB_0164|M.abscessus_ATCC_1997      -------MNLTDFQSLYDLSGRTAIVTGGTRGIGYAIAEALGACGASVVV
Mb2788c|M.bovis_AF2122/97           -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL
Rv2766c|M.tuberculosis_H37Rv        -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL
MAV_3655|M.avium_104                -------------MTSQDLTGRTAIITGASRGIGLAIAQQLAAAGANVVL
MUL_4384|M.ulcerans_Agy99           ---------MGYADQLFDLTDHVVLITGGSRGLGRQMAFAAARCGANVVI
MMAR_4927|M.marinum_M               ---------------MGQFENKVAIVTGAAQGIGQAYADALAREGARVVV
MLBr_01807|M.leprae_Br4923          MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV
                                                      : .:  ::**. :*:*   *      *  *.:

Mflv_4818|M.gilvum_PYR-GCK          ASRKADACEQAAHHLR-ELGAQAIGVPTHLGQVDDLGALVERTVAEFGGL
Mvan_1624|M.vanbaalenii_PYR-1       ASRKADACEETARHLR-ELGGSAIGVPTHLGEVDDLGALVERTVAEFGGV
MSMEG_1740|M.smegmatis_MC2_155      ASRKPDACETAAAHLR-ELGGDAVGVPAHTGDVDDLGAVVERAVSEFGGV
TH_2589|M.thermoresistible__bu      ASRKSDACERAAAHLR-ALGGDAIGVPTHLGDIDACEALVRRTVDEFGGI
MAB_0164|M.abscessus_ATCC_1997      SSRKSDACTAAAKELH-DKGYRALGVPAHMGELGDIDALVTATVDEYGGV
Mb2788c|M.bovis_AF2122/97           TARRQE----AADEAAAQVGDRALGVGAHAVDEDAARRCVDLTLERFGSV
Rv2766c|M.tuberculosis_H37Rv        TARRQE----AADEAAAQVGDRALGVGAHAVDEDAARRCVDLTLERFGSV
MAV_3655|M.avium_104                TARKQE----AADEAAAQVGPQALGVGAHAVDEDAARQCVQLTLERFGSV
MUL_4384|M.ulcerans_Agy99           ASRNLDNCVATATEIESETGRSALAYQVHVGRWDQLDGLVAASYERFGKI
MMAR_4927|M.marinum_M               ADINAEAAEKTAKQIV-ADGGTAIHVPVDVSDEESARAMADRTVSEFGGI
MLBr_01807|M.leprae_Br4923          T------------HRASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQGPV
                                    :            .         .    .                . * :

Mflv_4818|M.gilvum_PYR-GCK          DVLVNNAAN---PLAQPFGHMTVDALSKSFEVNLQGPVMLTQEALPHLKA
Mvan_1624|M.vanbaalenii_PYR-1       DVLVNNAAN---PLAQPFGYMTVDALTKSFEVNLRGPVMLVQEALPHLKA
MSMEG_1740|M.smegmatis_MC2_155      DVVVNNAAN---ALAQPLGKMTPEAWAKSYEVNLRGPVFLVQHALPYLQK
TH_2589|M.thermoresistible__bu      DVLVNNAAN---ALTQPLGELTVDAWTKSFEVNLRGPVFLVQAALPHLKT
MAB_0164|M.abscessus_ATCC_1997      DIVVNAAAN---PVAQPMGSYTPEALGKSFDVNVRGPVFLVQAALPHLTA
Mb2788c|M.bovis_AF2122/97           DILINNAGTN--PAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMG
Rv2766c|M.tuberculosis_H37Rv        DILINNAGTN--PAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMG
MAV_3655|M.avium_104                DILVNNAGTN--PAYGPLIEQDHARFAKIFDVNLWAPLLWTSLAVKSWMG
MUL_4384|M.ulcerans_Agy99           DTLINNAGMS--PLYDKLSDVTEKLFDAVLNLNLKGPFRLSALVGERMVA
MMAR_4927|M.marinum_M               DYLVNNAAIYGGMKLDLLLTVPLDYYKKFMSVNHDGVLVCTRAVYKHMAK
MLBr_01807|M.leprae_Br4923          EVLVANAGIT---SDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIK
                                    : ::  *.         :            .:*  . .     .      

Mflv_4818|M.gilvum_PYR-GCK          SDHAAVLNMVSVGAFIFAPMLSIYASMKAAMMSFTRSMAAEFVHDGIRVN
Mvan_1624|M.vanbaalenii_PYR-1       SEHAAVLNMVSVGAFIFAPMLSIYASMKAAMMSFTRSMAAEFVHHGIRVN
MSMEG_1740|M.smegmatis_MC2_155      SQNAAVLNMVSVGAFNFAPALSIYASSKAALMSVTRSMAAEFAPSGIRVN
TH_2589|M.thermoresistible__bu      SPHAAVLNMVSVGAFLFSPGTAMYSAGKAALMSFTRSMAAQFAPLGIRVN
MAB_0164|M.abscessus_ATCC_1997      SEHASVLNVVSVAAFQYVPMLSMYAAMKATLMSFTRSMAAEYTARGIRVN
Mb2788c|M.bovis_AF2122/97           EHGGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVN
Rv2766c|M.tuberculosis_H37Rv        EHGGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVN
MAV_3655|M.avium_104                EHGGSIVNTASIGGLHQSPAMGMYNATKAALIHVTKQLALELSPR-VRVN
MUL_4384|M.ulcerans_Agy99           ADGGSIINVSSAGSLRPSADIIPYAAAKAGLNAMTEGLARAFGPT-VRVN
MMAR_4927|M.marinum_M               RGGGAIVNQSSTAAWLYS---NFYGLAKVGVNGLTQQLSRELGGMKIRIN
MLBr_01807|M.leprae_Br4923          QRFGRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITAN
                                       .  :   *  .         *   *  :  .:. ::       :  *

Mflv_4818|M.gilvum_PYR-GCK          ALAPGPVDTDMMRKNPQEAIDG-MVGGTLVGRLASADEMVGAALLLTSDA
Mvan_1624|M.vanbaalenii_PYR-1       ALAPGPVDTDMMRKNPQEAIDG-MVGGTLLGRLATPDEMVGAALLLTSDA
MSMEG_1740|M.smegmatis_MC2_155      ALAPGPVDTDMMRKNPQEAIDA-MTAGTLMKRLAHPDEMVGAALLLCSDA
TH_2589|M.thermoresistible__bu      ALAPGPVDTDMMRNNPQEVVDM-MAGATLMKRLATPDEMVGAALLLTSDA
MAB_0164|M.abscessus_ATCC_1997      ALAPGTVDTYMLQQNPQEIIDA-MAAQSFMGRVAHTDEMIGPALLLLSDA
Mb2788c|M.bovis_AF2122/97           AICPGVVRTRLAEALWKDHEDP-LAATIALGRIGEPADIASAVAFLVSDA
Rv2766c|M.tuberculosis_H37Rv        AICPGVVRTRLAEALWKDHEDP-LAATIALGRIGEPADIASAVAFLVSDA
MAV_3655|M.avium_104                AIAPGVVRTRLAEALWKDHEDP-LSSSIALGRIGEPIDVAAAVAFLVSDA
MUL_4384|M.ulcerans_Agy99           TLMAGPFLTDVSKAWNLDAATQNPFGHLALRRAGNPPEIVGAALFLASDA
MMAR_4927|M.marinum_M               AIAPGPIDTEATRTVTPGEFVKDMVKQIPLSRMGTPEDLVGMCLFLLGDQ
MLBr_01807|M.leprae_Br4923          VVAPGFIDTEMTRAMDSKYQEA-ALQAIPLGRIGAVEEIAGAVSFLASED
                                    .: .* . *   .                : * .   :: .   :* .: 

Mflv_4818|M.gilvum_PYR-GCK          GSYITGQVIIADGGG-TPR------------
Mvan_1624|M.vanbaalenii_PYR-1       GSYITGQVIIADGGG-TPR------------
MSMEG_1740|M.smegmatis_MC2_155      GSYMTGQVVIVDGGG-TPR------------
TH_2589|M.thermoresistible__bu      GSYITGTVLIADGGG-TPR------------
MAB_0164|M.abscessus_ATCC_1997      GSFITGQVIVADGGGGVQR------------
Mb2788c|M.bovis_AF2122/97           ASWITGETMIIDGGLLLGNALGFRAAPSTEH
Rv2766c|M.tuberculosis_H37Rv        ASWITGETMIIDGGLLLGNALGFRAAPSTEH
MAV_3655|M.avium_104                ASWITGETLVIDGGTVLGAAQGFRSAPTPS-
MUL_4384|M.ulcerans_Agy99           SSFTTGSILRADGGIP---------------
MMAR_4927|M.marinum_M               ASWITGQIFNVDGGQIIRS------------
MLBr_01807|M.leprae_Br4923          AGYISGAVIPVDGGLGMGH------------
                                    ..: :*  .  ***