For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNLTDFQSLYDLSGRTAIVTGGTRGIGYAIAEALGACGASVVVSSRKSDACTAAAKELHDKGYRALGVPA HMGELGDIDALVTATVDEYGGVDIVVNAAANPVAQPMGSYTPEALGKSFDVNVRGPVFLVQAALPHLTAS EHASVLNVVSVAAFQYVPMLSMYAAMKATLMSFTRSMAAEYTARGIRVNALAPGTVDTYMLQQNPQEIID AMAAQSFMGRVAHTDEMIGPALLLLSDAGSFITGQVIVADGGGGVQR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0164 | - | - | 100% (257) | short chain dehydrogenase/reductase |
M. abscessus ATCC 19977 | MAB_0833 | - | 3e-80 | 58.33% (252) | Short-chain dehydrogenase/reductase |
M. abscessus ATCC 19977 | MAB_0952 | - | 4e-34 | 36.84% (247) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2788c | fabG | 2e-38 | 37.04% (243) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_4818 | - | 7e-87 | 62.50% (248) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv2766c | fabG | 2e-38 | 37.04% (243) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 2e-21 | 29.88% (241) | 3-oxoacyl- |
M. marinum M | MMAR_1952 | fabG | 6e-37 | 36.63% (243) | short-chain type dehydrogenase/reductase |
M. avium 104 | MAV_3655 | fabG | 4e-39 | 37.45% (243) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. smegmatis MC2 155 | MSMEG_1740 | - | 1e-84 | 62.10% (248) | dehydrogenase/reductase SDR family protein member 4 |
M. thermoresistible (build 8) | TH_2589 | - | 2e-83 | 60.47% (253) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_2173 | fabG | 2e-36 | 36.21% (243) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. vanbaalenii PYR-1 | Mvan_1624 | - | 4e-88 | 63.24% (253) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4818|M.gilvum_PYR-GCK -------MDRASFDRLFDMTDRTVVVTGGTRGIGLALAEGYALAGARVVV Mvan_1624|M.vanbaalenii_PYR-1 -------MDRASFDRLFDMTDRTVVVTGGTRGIGLALAEGYVLAGARVVV MSMEG_1740|M.smegmatis_MC2_155 -------MDRQRFERLFDMSDRTVIVTGGTRGIGLSLAEGFVLAGARVVV TH_2589|M.thermoresistible__bu -------VDRQTFDKLFDMTGRTVVVTGGTRGIGLALAEGYVLAGARVVV MAB_0164|M.abscessus_ATCC_1997 -------MNLTDFQSLYDLSGRTAIVTGGTRGIGYAIAEALGACGASVVV Mb2788c|M.bovis_AF2122/97 -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL Rv2766c|M.tuberculosis_H37Rv -------------MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVL MMAR_1952|M.marinum_M -------------MTSLDLTGRTAIITGASRGIGLAIAQRLAGAGANVVL MUL_2173|M.ulcerans_Agy99 -------------MTSLDLTGRTAIITGASRGIGLAIAQRLAGAGANVVL MAV_3655|M.avium_104 -------------MTSQDLTGRTAIITGASRGIGLAIAQQLAAAGANVVL MLBr_01807|M.leprae_Br4923 MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV : .*: ::**..**** ::*. * *.: Mflv_4818|M.gilvum_PYR-GCK ASRKADACEQAAHHLRELGAQAIGVPTHLGQVDDLGALVERTVAEFGGLD Mvan_1624|M.vanbaalenii_PYR-1 ASRKADACEETARHLRELGGSAIGVPTHLGEVDDLGALVERTVAEFGGVD MSMEG_1740|M.smegmatis_MC2_155 ASRKPDACETAAAHLRELGGDAVGVPAHTGDVDDLGAVVERAVSEFGGVD TH_2589|M.thermoresistible__bu ASRKSDACERAAAHLRALGGDAIGVPTHLGDIDACEALVRRTVDEFGGID MAB_0164|M.abscessus_ATCC_1997 SSRKSDACTAAAKELHDKGYRALGVPAHMGELGDIDALVTATVDEYGGVD Mb2788c|M.bovis_AF2122/97 TARRQEAADEAAAQVGDR---ALGVGAHAVDEDAARRCVDLTLERFGSVD Rv2766c|M.tuberculosis_H37Rv TARRQEAADEAAAQVGDR---ALGVGAHAVDEDAARRCVDLTLERFGSVD MMAR_1952|M.marinum_M TARKQESADAAAAEVGER---AVGVGAHAVDEEAARGCVDLALERFGSVD MUL_2173|M.ulcerans_Agy99 TARKQESADAAAAEVGER---AVGVGAHAVDEEAARGCVDLALERFGSVD MAV_3655|M.avium_104 TARKQEAADEAAAQVGPQ---ALGVGAHAVDEDAARQCVQLTLERFGSVD MLBr_01807|M.leprae_Br4923 THRASVVPD-----------WFFGVECDVTDNDAIGAAFKAVEEHQGPVE : * .** . : . . . * :: Mflv_4818|M.gilvum_PYR-GCK VLVNNAAN-PLAQPFGHMTVDALSKSFEVNLQGPVMLTQEALPHLKASDH Mvan_1624|M.vanbaalenii_PYR-1 VLVNNAAN-PLAQPFGYMTVDALTKSFEVNLRGPVMLVQEALPHLKASEH MSMEG_1740|M.smegmatis_MC2_155 VVVNNAAN-ALAQPLGKMTPEAWAKSYEVNLRGPVFLVQHALPYLQKSQN TH_2589|M.thermoresistible__bu VLVNNAAN-ALTQPLGELTVDAWTKSFEVNLRGPVFLVQAALPHLKTSPH MAB_0164|M.abscessus_ATCC_1997 IVVNAAAN-PVAQPMGSYTPEALGKSFDVNVRGPVFLVQAALPHLTASEH Mb2788c|M.bovis_AF2122/97 ILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEHG Rv2766c|M.tuberculosis_H37Rv ILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEHG MMAR_1952|M.marinum_M ILINNAGTNPAYGPLIEQDHARFTKIFDVNLWAPLMWTSLVVKAWMGEHG MUL_2173|M.ulcerans_Agy99 ILINNAGTNPAYGPLIEQDHARFTKIFDVNLWAPLMWTSLVVKAWMGEHG MAV_3655|M.avium_104 ILVNNAGTNPAYGPLIEQDHARFAKIFDVNLWAPLLWTSLAVKSWMGEHG MLBr_01807|M.leprae_Br4923 VLVANAGI-TSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQRF ::: *. . : * :**: . . .. . . Mflv_4818|M.gilvum_PYR-GCK AAVLNMVSVGAFIFAPMLSIYASMKAAMMSFTRSMAAEFVHDGIRVNALA Mvan_1624|M.vanbaalenii_PYR-1 AAVLNMVSVGAFIFAPMLSIYASMKAAMMSFTRSMAAEFVHHGIRVNALA MSMEG_1740|M.smegmatis_MC2_155 AAVLNMVSVGAFNFAPALSIYASSKAALMSVTRSMAAEFAPSGIRVNALA TH_2589|M.thermoresistible__bu AAVLNMVSVGAFLFSPGTAMYSAGKAALMSFTRSMAAQFAPLGIRVNALA MAB_0164|M.abscessus_ATCC_1997 ASVLNVVSVAAFQYVPMLSMYAAMKATLMSFTRSMAAEYTARGIRVNALA Mb2788c|M.bovis_AF2122/97 GAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAIC Rv2766c|M.tuberculosis_H37Rv GAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAIC MMAR_1952|M.marinum_M GVVINTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-VRVNAIC MUL_2173|M.ulcerans_Agy99 GVVINTASIGGMHQSPAMGMYNATNAALIHVTKQLALELSPR-VRVNAIC MAV_3655|M.avium_104 GSIVNTASIGGLHQSPAMGMYNATKAALIHVTKQLALELSPR-VRVNAIA MLBr_01807|M.leprae_Br4923 GRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVVA . : *: .: * . * : :: :: .::.:* : : .*.:. Mflv_4818|M.gilvum_PYR-GCK PGPVDTDMMRKNPQEAIDGMVGGTLVGRLASADEMVGAALLLTSDAGSYI Mvan_1624|M.vanbaalenii_PYR-1 PGPVDTDMMRKNPQEAIDGMVGGTLLGRLATPDEMVGAALLLTSDAGSYI MSMEG_1740|M.smegmatis_MC2_155 PGPVDTDMMRKNPQEAIDAMTAGTLMKRLAHPDEMVGAALLLCSDAGSYM TH_2589|M.thermoresistible__bu PGPVDTDMMRNNPQEVVDMMAGATLMKRLATPDEMVGAALLLTSDAGSYI MAB_0164|M.abscessus_ATCC_1997 PGTVDTYMLQQNPQEIIDAMAAQSFMGRVAHTDEMIGPALLLLSDAGSFI Mb2788c|M.bovis_AF2122/97 PGVVRTRLAEALWKDHEDPLAATIALGRIGEPADIASAVAFLVSDAASWI Rv2766c|M.tuberculosis_H37Rv PGVVRTRLAEALWKDHEDPLAATIALGRIGEPADIASAVAFLVSDAASWI MMAR_1952|M.marinum_M PGVVRTKLAEALWKDHEDPLAANIALGRIGEPVDVAEAVGFLVSDAASWI MUL_2173|M.ulcerans_Agy99 PGVVRTKLAEALWKDHEDPLAANIALGRIGEPVDVAEAVGFLVSDAASWI MAV_3655|M.avium_104 PGVVRTRLAEALWKDHEDPLSSSIALGRIGEPIDVAAAVAFLVSDAASWI MLBr_01807|M.leprae_Br4923 PGFIDTEMTRAMDSKYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGYI ** : * : . .. : : *:. :: .. :* *: ..:: Mflv_4818|M.gilvum_PYR-GCK TGQVIIADGGG-TPR------------ Mvan_1624|M.vanbaalenii_PYR-1 TGQVIIADGGG-TPR------------ MSMEG_1740|M.smegmatis_MC2_155 TGQVVIVDGGG-TPR------------ TH_2589|M.thermoresistible__bu TGTVLIADGGG-TPR------------ MAB_0164|M.abscessus_ATCC_1997 TGQVIVADGGGGVQR------------ Mb2788c|M.bovis_AF2122/97 TGETMIIDGGLLLGNALGFRAAPSTEH Rv2766c|M.tuberculosis_H37Rv TGETMIIDGGLLLGNALGFRAAPSTEH MMAR_1952|M.marinum_M TGETMVIDGGLLLGSAAGFQSRPGSAS MUL_2173|M.ulcerans_Agy99 TGETMVIDGGLLLGSAAGFQSRPGSAS MAV_3655|M.avium_104 TGETLVIDGGTVLGAAQGFRSAPTPS- MLBr_01807|M.leprae_Br4923 SGAVIPVDGGLGMGH------------ :* .: ***