For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ELSGKTVLVTGATGGLGRAIASSLADRGAELILSSRKPAELDQLAASLPGRNHRSVVSDLAEPGAALALL AEAGEIDVLVANAALPASGKLETFTAEQVDRALRVNLEIPVQMTRELIPAFTQRGSGHFVFVSSISGKTA TARASLYAATKFGIRGFALCLRDDLRPAGVGVSVVSPGAISGAGMLADSGATAPPLIGTGRPDQVGAAVV TAIERNRGEVTVAPLRQRALARFAANAPEIASRLGGGIAAKAADEIAAGQLHKR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_3139 | - | - | 100% (265) | short-chain dehydrogenase |
M. ulcerans Agy99 | MUL_0819 | adh_1 | 4e-26 | 34.07% (226) | short-chain dehydrogenase Adh_1 |
M. ulcerans Agy99 | MUL_3400 | - | 5e-22 | 37.77% (188) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1079 | - | 3e-23 | 31.08% (251) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_0296 | - | 1e-20 | 32.67% (251) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1050 | - | 3e-23 | 31.08% (251) | oxidoreductase |
M. leprae Br4923 | MLBr_01740 | - | 2e-20 | 36.36% (187) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_1526 | - | 2e-25 | 32.16% (227) | short chain dehydrogenase |
M. marinum M | MMAR_2623 | - | 1e-141 | 98.49% (265) | short-chain dehydrogenase |
M. avium 104 | MAV_4982 | - | 6e-22 | 28.11% (249) | short-chain dehydrogenase/reductase SDR |
M. smegmatis MC2 155 | MSMEG_5204 | - | 5e-24 | 37.67% (223) | oxidoreductase, short chain dehydrogenase/reductase family |
M. thermoresistible (build 8) | TH_2445 | - | 9e-24 | 31.64% (256) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. vanbaalenii PYR-1 | Mvan_4623 | - | 4e-26 | 32.92% (243) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mb1079|M.bovis_AF2122/97 ---MARQRFRDQVVLITGASSGIGEATAKAFAREGAVVALAARREGALRR Rv1050|M.tuberculosis_H37Rv ---MARQRFRDQVVLITGASSGIGEATAKAFAREGAVVALAARREGALRR MAB_1526|M.abscessus_ATCC_1997 MSRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKE TH_2445|M.thermoresistible__bu ------MTFAGKHALVTGAGSGIGAALCRALAAAGAEVMCTDIDGAAAER MUL_3139|M.ulcerans_Agy99 ------MELSGKTVLVTGATGGLGRAIASSLADRGAELILSSRKPAELDQ MMAR_2623|M.marinum_M ------MELSGKTVLVTGATGGLGRAIASSLADRGAELILSSRKPAELDQ Mflv_0296|M.gilvum_PYR-GCK ----MDMGLSGKRALVTGSSSGLGRAIAESLAAEGASVVVHGRDEVRTGA MSMEG_5204|M.smegmatis_MC2_155 -MNNHSTRLEGRTALVTGATGGLGVAIASSLAANGAHVVITGRDAARGDA Mvan_4623|M.vanbaalenii_PYR-1 ------MELRGKRVLITGASRGIGESLAHNFAGAGARVALVARSRDSLES MLBr_01740|M.leprae_Br4923 -MVKTAQYFVGKRCFVTGAASGIGRATALRLAAYGAELYLTDRHCDGLAQ MAV_4982|M.avium_104 ---------MPKTWFITGSSRGLGRALTTAVLDHGDHVVATARRPAQLDE .:**. *:* : . * : Mb1079|M.bovis_AF2122/97 VAREIEAA-GGRAMVAPLDVSSSES--VRAMVADVVGEFGRIDVVFNNAG Rv1050|M.tuberculosis_H37Rv VAREIEAA-GGRAMVAPLDVSSSES--VRAMVADVVGEFGRIDVVFNNAG MAB_1526|M.abscessus_ATCC_1997 TANGIPN-----AHSGALDVTKPES--WAGFLDQVRAESGPVDILINNAG TH_2445|M.thermoresistible__bu TAQSIG------GRWAALDVTDAAA--VQAAVDGVVDRAGRLDLLFNNAG MUL_3139|M.ulcerans_Agy99 LAASLP---GRNHRSVVSDLAEPG------AALALLAEAGEIDVLVANAA MMAR_2623|M.marinum_M LAASLP---GRNHRSIVSDLAEPG------AALALLAEAGEIDVLVANAA Mflv_0296|M.gilvum_PYR-GCK VADGIRAR-GGDAWAAVGDLATEG------GAGAVAAAAGEVDILVNNAG MSMEG_5204|M.smegmatis_MC2_155 VVAGIRSA-GGRVDLVAADLAAGEDEVRRLARRAVEVAGGHIDILVNNAG Mvan_4623|M.vanbaalenii_PYR-1 LAVELG------GTVHPADLSDSTQ--VSGLIRRVEDDGGPIDVLVNNAG MLBr_01740|M.leprae_Br4923 TVSEARALGAQVPEYRALDISDYDE--VAAFGADIHARHPSMDIVMNIAG MAV_4982|M.avium_104 LVDRYGPR----IRACELDVTDRAA--ARRAIAAAVTAFGRIDVVVNNAG . *:: :*::. *. Mb1079|M.bovis_AF2122/97 VSLVGPVDAETFLDDTREMLEIDYLGTVRVVREVLPIMKQQRSG-RIMNM Rv1050|M.tuberculosis_H37Rv VSLVGPVDAETFLDDTREMLEIDYLGTVRVVREVLPIMKQQRSG-RIMNM MAB_1526|M.abscessus_ATCC_1997 VMPLGGFIEEN-ERTTDLILDVNVRGPLNGARAVLPQMVARGRG-HVVNV TH_2445|M.thermoresistible__bu IVWGGDTELLT-LDQWNAIIDVNIRGVVHGVAAAYPLMVRQGHG-HIVNT MUL_3139|M.ulcerans_Agy99 LPAS-GKLETFTAEQVDRALRVNLEIPVQMTRELIPAFTQRGSG-HFVFV MMAR_2623|M.marinum_M LPAS-GKLETFTAEQVDRALRVNLEIPVQMTRELIPAFTQRGSG-HFVFV Mflv_0296|M.gilvum_PYR-GCK VYDG-LAWSDLAPRQWQSIYEVNVVSGVRMIEYLVPGMRQRGWG-RIIQI MSMEG_5204|M.smegmatis_MC2_155 LWGMPEATSAVSEPDLLASFRTNVIAPFLLTGALAPAMAERGHG-AVVNV Mvan_4623|M.vanbaalenii_PYR-1 IEST-ACFTDAPEDELRRVTDVNYLAPAELCRQAIPGMLRRGGG-HIVNV MLBr_01740|M.leprae_Br4923 VSVW-GTVDRLTHDQWSNVVAINLMGPIHIIETFVPAILAAGRGGHLVNV MAV_4982|M.avium_104 YANS-APVEEVSDDDFRAQVETNFFGVVNVTKAALPVLHRQRAG-HIVQI : * : * .: Mb1079|M.bovis_AF2122/97 SSVVGRKA-FARFAGYSSAMHAIAGFSDALRQELRGSGIAVSVIHPALTQ Rv1050|M.tuberculosis_H37Rv SSVVGRKA-FARFAGYSSAMHAIAGFSDALRQELRGSGIAVSVIHPALTQ MAB_1526|M.abscessus_ATCC_1997 ASMAGKLA-VPGMVTYNASKFGAVGLSVALRKEYGNTGVSVSCVLPSAVR TH_2445|M.thermoresistible__bu ASMAGLAA-AGQLTSYVMTKHAVVGLSLALRSEAAAHGVGVLAVCPAAVE MUL_3139|M.ulcerans_Agy99 SSISGKTA-TARASLYAATKFGIRGFALCLRDDLRPAGVGVSVVSPGAIS MMAR_2623|M.marinum_M SSISGKTA-TARASLYAATKFGIRGFALCLRDDLRPAGVGVSVVSPGAIS Mflv_0296|M.gilvum_PYR-GCK GGGLALQP-AADQPHYNATLAARHNLTVSLARELAGTGVTSNTVAPGAIL MSMEG_5204|M.smegmatis_MC2_155 GSITGFIG-GDRAALYSSTKAAVHSLTKSWAVEYGPQGVRVNAVAPGPIA Mvan_4623|M.vanbaalenii_PYR-1 SSLSGIVL-FPGLVSYSASKAALSHFTAGLRTDFRGLPIGTTLVELGPIP MLBr_01740|M.leprae_Br4923 SSAAGLVA-LPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPGAVR MAV_4982|M.avium_104 SSVGGRVGGSPGIAAYQASKFAVAGFSEALAAEVAPLGIKVTIAEPGALR .. . * : . :: : : . Mb1079|M.bovis_AF2122/97 TPLLANVDPADMP---------PPFRSLTPIPVHWVAAAVLDGVARRRAR Rv1050|M.tuberculosis_H37Rv TPLLANVDPADMP---------PPFRSLTPIPVHWVAAAVLDGVARRRAR MAB_1526|M.abscessus_ATCC_1997 TELASGAPLG------------KG---MPTVDPEDVAAAIVRSVDTRRAQ TH_2445|M.thermoresistible__bu TPLLDKGAVGGFLGRD---YFIRGQGVRSAYDPDRLASDTLRAVQRNKAL MUL_3139|M.ulcerans_Agy99 GAGMLADSGATAP------------PLIGTGRPDQVGAAVVTAIERNRGE MMAR_2623|M.marinum_M GAGMFADSGATAP------------PLIGTGTPDQVGAAVVTAIERNRGE Mflv_0296|M.gilvum_PYR-GCK TEPVREMTYRVAA------------QRGWGPTWEDVEKAAATTWFPNDIG MSMEG_5204|M.smegmatis_MC2_155 TERVLEAADHVSG------------VLARIPS-----------------R Mvan_4623|M.vanbaalenii_PYR-1 TDLLAKIDNYEPT-------------AKSFQRAYRWGVAVDTPRERVAEE MLBr_01740|M.leprae_Br4923 TPLVDTIEIAGVDRQDPRFSRWVDRFRGHAVSAERAAEKILAGVAKNRYL MAV_4982|M.avium_104 TEWAGSSMAVATVSPDYESTVGAMNRRRAGFNRNAPGDPARAAHAIIEVV Mb1079|M.bovis_AF2122/97 VVVPFQPRLLMVGDAFSPRYGDRVVRLLESKIFGRLIGSYRGSVYRHQPT Rv1050|M.tuberculosis_H37Rv VVVPFQPRLLMVGDAFSPRYGDRVVRLLESKIFGRLIGSYRGSVYRHQPT MAB_1526|M.abscessus_ATCC_1997 ISV---PGWLAFGWGLVDLFVPEPVERLA----RRLIDDRRALTSLDLNA TH_2445|M.thermoresistible__bu LVK---PRVAHAGW-LFARLAPGLMQRAS----IRFVERQRAG------Q MUL_3139|M.ulcerans_Agy99 VTVA--PLRQRALARFAANAPEIASRLGG----------------GIAAK MMAR_2623|M.marinum_M VTVA--PLRQRALARFAANAPEIASRLAG----------------GIAAK Mflv_0296|M.gilvum_PYR-GCK RFGR--PEEVAAAVAFLAG--VHAGYISG----------------ADLRV MSMEG_5204|M.smegmatis_MC2_155 RMST--PEEVAAAVVFLAG--DEAANIHG----------------AILSV Mvan_4623|M.vanbaalenii_PYR-1 VVKAVLKGRRHVRLPKRSAPLAMLAEAPR--------------RIAEIIL MLBr_01740|M.leprae_Br4923 IYTSHDIRVLYGFKRLAWWPYGVVMKQVNVVFTRALRPSPATMRCVEPIK MAV_4982|M.avium_104 IADDPPLRLLLGSDALSAALAKSHQQIAEAN------------RWAELSK Mb1079|M.bovis_AF2122/97 ESAKAQAAQPERGYSSAR Rv1050|M.tuberculosis_H37Rv ESAKAQAAQPERGYSSAR MAB_1526|M.abscessus_ATCC_1997 RGAYIERIERQSKEHQK- TH_2445|M.thermoresistible__bu RAAQVGR----------- MUL_3139|M.ulcerans_Agy99 AADEIAAGQLHKR----- MMAR_2623|M.marinum_M AADEIAAGQLHKR----- Mflv_0296|M.gilvum_PYR-GCK DGGAIRSVA--------- MSMEG_5204|M.smegmatis_MC2_155 DGGWAAA----------- Mvan_4623|M.vanbaalenii_PYR-1 TGVPHQAKS--------- MLBr_01740|M.leprae_Br4923 VGVYSQPRSGEGGKSGN- MAV_4982|M.avium_104 SIDYPPVATPHRAARSR-