For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AQRRYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLAQTVSAARALGAQVPEHRVLDISDY DEVAAFAADIHASHPSMDVVLNIAGISAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGGH LVNVSSAAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPLVDTVEIAGVDREDP QVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYTSADIRALYAFKRLAWWPYSVAMRQVNVIFTRALK PKPVALPQRE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3400 | - | - | 100% (291) | short chain dehydrogenase |
| M. ulcerans Agy99 | MUL_3160 | - | 4e-46 | 38.34% (253) | short-chain dehydrogenase |
| M. ulcerans Agy99 | MUL_4501 | - | 2e-37 | 37.11% (256) | short-chain type dehydrogenase/reductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3083c | - | 1e-142 | 87.14% (280) | short chain dehydrogenase |
| M. gilvum PYR-GCK | Mflv_4313 | - | 1e-128 | 77.97% (286) | short chain dehydrogenase |
| M. tuberculosis H37Rv | Rv3057c | - | 1e-142 | 87.14% (280) | short chain dehydrogenase |
| M. leprae Br4923 | MLBr_01740 | - | 1e-137 | 81.98% (283) | short chain dehydrogenase |
| M. abscessus ATCC 19977 | MAB_3420c | - | 1e-115 | 71.74% (276) | short chain dehydrogenase |
| M. marinum M | MMAR_1636 | - | 1e-165 | 99.66% (291) | short chain alcohol dehydrogenase/reductase |
| M. avium 104 | MAV_3924 | - | 1e-144 | 85.52% (290) | short chain dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_2291 | - | 1e-132 | 81.14% (281) | short chain dehydrogenase |
| M. thermoresistible (build 8) | TH_3261 | - | 1e-95 | 81.82% (198) | PUTATIVE ABC transporter ATP-binding protein |
| M. vanbaalenii PYR-1 | Mvan_2034 | - | 1e-130 | 79.86% (278) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_3400|M.ulcerans_Agy99 MAQR---RYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLA
MMAR_1636|M.marinum_M MAQR---RYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLA
MAV_3924|M.avium_104 MAQKASGRYYAGKRCLVTGAASGIGRATALRLAAHGAELYLTDRDGDGLR
Mb3083c|M.bovis_AF2122/97 MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLA
Rv3057c|M.tuberculosis_H37Rv MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLA
MLBr_01740|M.leprae_Br4923 MVKT--AQYFVGKRCFVTGAASGIGRATALRLAAYGAELYLTDRHCDGLA
Mflv_4313|M.gilvum_PYR-GCK MAQRSGSDRFSGKRCFVTGAASGIGRATALKLAARGAELYLTDRDADGLA
Mvan_2034|M.vanbaalenii_PYR-1 MAHRNGFDDFAGKRCLITGAASGIGRATALKLAARGAELFLTDRDADGLA
TH_3261|M.thermoresistible__bu ----------------------------------------VVDELGDRLR
MSMEG_2291|M.smegmatis_MC2_155 MAQG---SDFAGKRCFVTGAASGIGRATALALAAAGAELYLTDRDADGLV
MAB_3420c|M.abscessus_ATCC_199 MAYE-----FTGKRCFVTGAASGIGRATALRLGREGAELFLTDRAADGLE
:.*. * *
MUL_3400|M.ulcerans_Agy99 QTVSAARALGAQVPEHRVLDISDYDEVAAFAADIHASHPSMDVVLNIAGI
MMAR_1636|M.marinum_M QTVSAARALGAQVPEHRVLDISDYDEVAAFAADIHASHPSMDVVLNIAGI
MAV_3924|M.avium_104 LTVEDARALGASVPEHRALDIADYDQVASFAADIHAAHPPMDVVLNIAGV
Mb3083c|M.bovis_AF2122/97 QTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGV
Rv3057c|M.tuberculosis_H37Rv QTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGV
MLBr_01740|M.leprae_Br4923 QTVSEARALGAQVPEYRALDISDYDEVAAFGADIHARHPSMDIVMNIAGV
Mflv_4313|M.gilvum_PYR-GCK LTVADARALGGVVAEHRALDISDHDAVVAFADDIHSRHPAMDVVMNIAGI
Mvan_2034|M.vanbaalenii_PYR-1 LTVADARALGAVVAAHRALDISDYDAVAGFGADIHAAHPAMDVVMNIAGV
TH_3261|M.thermoresistible__bu RX----------------------------------XHPAMDVVMNIAGV
MSMEG_2291|M.smegmatis_MC2_155 QTVADARALGAEVPAHRALDISDYDQVREFAKDIHAAHGSMDVVMNIAGV
MAB_3420c|M.abscessus_ATCC_199 SVVEEIKAAGGKVSAYRALDISDHEAVAAFASDILATHPSMDVLLNIAGI
* .**:::****:
MUL_3400|M.ulcerans_Agy99 SAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS
MMAR_1636|M.marinum_M SAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS
MAV_3924|M.avium_104 SAWGTVDRLTHEQWRKMIDINLMGPIHVIETFVPPMVAAGRGGHLANVSS
Mb3083c|M.bovis_AF2122/97 SAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSS
Rv3057c|M.tuberculosis_H37Rv SAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSS
MLBr_01740|M.leprae_Br4923 SVWGTVDRLTHDQWSNVVAINLMGPIHIIETFVPAILAAGRGGHLVNVSS
Mflv_4313|M.gilvum_PYR-GCK SAWGTVDKLTHDDWTSLININLMGPIHVIETFVPPMMEARRGGHLVNVSS
Mvan_2034|M.vanbaalenii_PYR-1 SAWGTVDKLTHHHWKSLVDINLMGPIHVIETFVPPMIEARRGGHLVNVSS
TH_3261|M.thermoresistible__bu SAWGTVDQLTHQQWKAMIDINLMGPIHVVETFIPPMMAAGRGGHLVNVSS
MSMEG_2291|M.smegmatis_MC2_155 SAWGTVDRLSHQQWRSMVDINLMGPIHVIEEFIPPMIEARRGGHLVNVSS
MAB_3420c|M.abscessus_ATCC_199 SVWGSVDRLSHQQWRSVVDINLMGPIHVIESFVPAMIKARKGGQIVNVSS
*.**:**:*:*..* :: :*******::* ::*.:: * :**::.****
MUL_3400|M.ulcerans_Agy99 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPL
MMAR_1636|M.marinum_M AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPL
MAV_3924|M.avium_104 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVNTPL
Mb3083c|M.bovis_AF2122/97 AAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL
Rv3057c|M.tuberculosis_H37Rv AAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL
MLBr_01740|M.leprae_Br4923 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPGAVRTPL
Mflv_4313|M.gilvum_PYR-GCK AAGIVALPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPGAVRTPL
Mvan_2034|M.vanbaalenii_PYR-1 AAGIVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVRTPL
TH_3261|M.thermoresistible__bu AAGLVALPWHAAYSASKYGLRGMSEVLRFDLARHGIGVSVVVPGAVRTGL
MSMEG_2291|M.smegmatis_MC2_155 AAGLVALPWHGAYSASKFGLRGVSEVLRFDLARHRIGVSVVVPGAVKTGL
MAB_3420c|M.abscessus_ATCC_199 AAGIVALPWHAAYSASKYGLRGVSEVLRFDLARYKIGVTVVVPGAVNTPL
***:*.****.******:****:**********: ***:******* * *
MUL_3400|M.ulcerans_Agy99 VDTVEIAGVDREDPQVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYT
MMAR_1636|M.marinum_M VNTVEIAGVDREDPQVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYT
MAV_3924|M.avium_104 VNTVEIAGVDRDDPDVARWVRRFAGHAVSPEKAADKILAGVARNRYLIYT
Mb3083c|M.bovis_AF2122/97 VNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNRYLVYT
Rv3057c|M.tuberculosis_H37Rv VNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNRYLVYT
MLBr_01740|M.leprae_Br4923 VDTIEIAGVDRQDPRFSRWVDRFRGHAVSAERAAEKILAGVAKNRYLIYT
Mflv_4313|M.gilvum_PYR-GCK VDTVRIAGVDRDDPRVQKWTNRFSGHAVSPDVAADKILDGVARNRYLIYT
Mvan_2034|M.vanbaalenii_PYR-1 VDTVHIAGVDRDDPNVRKWTDRFAGHAVSPEVAADKILRGVVKNRYLVFT
TH_3261|M.thermoresistible__bu VQTVQIAGVDRDDPRVQKWVDRFSGHAVSPERAADKILAGVRRNRYLIYT
MSMEG_2291|M.smegmatis_MC2_155 VQTVEIAGVDREDPDVKKWVDRFAGHAISPEKAAAKILAGVRRNRFLIYT
MAB_3420c|M.abscessus_ATCC_199 VRTVDIAGVDRENENVARWIGRFVGHAVSPEKVADRILYGIRHNRYLVYT
* *: ******:: . :* ** ***::.: .* :** *: :**:*::*
MUL_3400|M.ulcerans_Agy99 SADIRALYAFKRLAWWPYSVAMRQVNVIFTRALKPKPVALPQRE------
MMAR_1636|M.marinum_M SADIRALYAFKRLAWWPYSVAMRQVNVIFTRALKPKPVALPQRE------
MAV_3924|M.avium_104 SPDIRALYAFKRLAWWPYSVAMRQVNVIFTRALRPAPATLVRHDQLETHP
Mb3083c|M.bovis_AF2122/97 SADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP-------------
Rv3057c|M.tuberculosis_H37Rv SADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP-------------
MLBr_01740|M.leprae_Br4923 SHDIRVLYGFKRLAWWPYGVVMKQVNVVFTRALRPSPATMRCVEPIKVGV
Mflv_4313|M.gilvum_PYR-GCK SLDIRALYLFKRTMWLPYSIAMKQVNPLFTRALRPKTKQR----------
Mvan_2034|M.vanbaalenii_PYR-1 SHDIRALYLFKRTAWVPYSVTMKQVNVLFTRALRPNPKQR----------
TH_3261|M.thermoresistible__bu SADIRALYLFKRLAWAPYSFAMRRVNVLFTRALRPGRP------------
MSMEG_2291|M.smegmatis_MC2_155 SADIRALYTFKRVAWWPYSVAMRQVNVLFTRALRSGTSPR----------
MAB_3420c|M.abscessus_ATCC_199 SVDIRALYLFKRTLWWPYSVAMRVANYAFTNALRPGFQKTGSASSPRDS-
* ***.** *** * ** ..*: .* **.**:.
MUL_3400|M.ulcerans_Agy99 --------------
MMAR_1636|M.marinum_M --------------
MAV_3924|M.avium_104 EQPDRPVELE----
Mb3083c|M.bovis_AF2122/97 --------------
Rv3057c|M.tuberculosis_H37Rv --------------
MLBr_01740|M.leprae_Br4923 YSQPRSGEGGKSGN
Mflv_4313|M.gilvum_PYR-GCK --------------
Mvan_2034|M.vanbaalenii_PYR-1 --------------
TH_3261|M.thermoresistible__bu --------------
MSMEG_2291|M.smegmatis_MC2_155 --------------
MAB_3420c|M.abscessus_ATCC_199 --------------