For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SAVRTSPDITMALTVDGIRAAIQPALERLSATARFREDTRDYAYDDVYELAAHGVGLTGIARTEGGAGGT VRDVADLTITIARADSNVAQALRPTFLVAHQIAARHDVPLRAVNLERLRNRALFAGTGNERNGGASGSVS TTARRVEGGYVINGRKYYSTGGLYASYFSAQALTEDGTVVHFTVPVDRPGVDRLDDFDAIGQRLTQSGST QLTEVRVDDDETVVMADSIPDNPWRGSFAQLYLAAVQAGIAARALDDAVQYVREKGRPIKHSSATRSVDD PYIRQTVGEIAARAQGARAAVLLAAEALQNQRGLRREQARHAGAEAAVTVAQAGVVAVESALRAAELLFD VGGGSITDRSLGFDRHWRNARTAANHNPRQWKLAVAGAYHLVGEEPPTTGLF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4094 | - | - | 100% (403) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4391 | - | 2e-51 | 34.54% (388) | acyl-CoA dehydrogenase-family protein |
M. smegmatis MC2 155 | MSMEG_5001 | - | 3e-51 | 34.20% (386) | pesticide degrading monooxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3121c | - | 8e-09 | 26.64% (244) | hypothetical protein Mb3121c |
M. gilvum PYR-GCK | Mflv_4370 | - | 1e-11 | 23.42% (380) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv3094c | - | 8e-09 | 26.64% (244) | hypothetical protein Rv3094c |
M. leprae Br4923 | MLBr_00660 | fadE23 | 1e-06 | 25.52% (239) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_1422c | - | 4e-52 | 35.51% (383) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_4034 | fadE | 1e-10 | 23.87% (377) | acyl-CoA dehydrogenase FadE |
M. avium 104 | MAV_3422 | - | 2e-52 | 35.99% (389) | acyl-CoA dehydrogenase domain-containing protein |
M. thermoresistible (build 8) | TH_3393 | - | 5e-44 | 33.66% (407) | PUTATIVE Acyl-CoA dehydrogenase, type 2, C-terminal domain |
M. ulcerans Agy99 | MUL_3778 | fadE19 | 3e-07 | 22.93% (362) | acyl-CoA dehydrogenase FadE19 |
M. vanbaalenii PYR-1 | Mvan_3173 | - | 3e-42 | 32.03% (409) | acyl-CoA dehydrogenase type 2 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3121c|M.bovis_AF2122/97 --------------------MNQSETEIEILAEKIARWARARSAEIERDR Rv3094c|M.tuberculosis_H37Rv --------------------MNQSETEIEILAEKIARWARARSAEIERDR MAB_1422c|M.abscessus_ATCC_199 -MTSAPSV--------LEIRALPGTDTYRNLLAQVAEGARD--RDLD--D MAV_3422|M.avium_104 -MPVAFHR--------QDT--PAGAAAVQPVLAEIAADYRL--RLADGGT MSMEG_4094|M.smegmatis_MC2_155 -MSAVRTS--------PDITMALTVDGIRAAIQPALERLSATARFREDTR TH_3393|M.thermoresistible__bu ----VTEP--------LTMARIVDTAEALAVAARLSGSFAAEASTRDAER Mvan_3173|M.vanbaalenii_PYR-1 MATDITDR--------IPDTLLRTPADALAAAEEVAEAIAAGSAERERAG Mflv_4370|M.gilvum_PYR-GCK -MASPPANAAEAGIPSAEVNDEDFQAILAATREFVRTAVVPREQEILSTD MMAR_4034|M.marinum_M -MTAP------------QVSDEDFAQILAQTRHFVRSVVLPREQQILDED MUL_3778|M.ulcerans_Agy99 -MTTAIS---------AGTLPKEYQDLRDTVADFARSVVAPVSAKHDEEH MLBr_00660|M.leprae_Br4923 -MAINLELS---------RKLQAVIVKTHQGAAELMRPIARKYDLKEHTY Mb3121c|M.bovis_AF2122/97 RLPDELVTRLREAGLLRATMPREVAAPELAPGRALRCAEAVARGDASAGW Rv3094c|M.tuberculosis_H37Rv RLPDELVTRLREAGLLRATMPREVAAPELAPGRALRCAEAVARGDASAGW MAB_1422c|M.abscessus_ATCC_199 ENPFDQVRLLKEAGFGRLRIPTELGGAGLSVRQLFSAIIDVAQADPIVAH MAV_3422|M.avium_104 EPPLRGLKLVRDHRLGALRLARELGGAGYTAPEFFDYLVALAAADPDLAH MSMEG_4094|M.smegmatis_MC2_155 DYAYDDVYELAAHGVGLTGIARTEGGAGGTVRDVADLTITIARADSNVAQ TH_3393|M.thermoresistible__bu LLPYEQVCELKRSGLLTLSVPAEHGGLDVPATVLAEVFRLLAHGDPSVAQ Mvan_3173|M.vanbaalenii_PYR-1 AVLTPQLRLVAESGLLGISVPTAHGGPGLPASTVVEVLRRLARADGAVGQ Mflv_4370|M.gilvum_PYR-GCK QVPDDLREQTKSMGLFGYAIPQEWGGLGLNLAQDVELAMELGYTSLALRS MMAR_4034|M.marinum_M RVPEDLRDQAKQMGLFGYAIPPQWGGLGLNLVQDVELAMELGYTSLAVRS MUL_3778|M.ulcerans_Agy99 SFPYEVVAKMGEMGLFGLPFPEEYGGMGGDYFALALALEELGKVNQSVAI MLBr_00660|M.leprae_Br4923 PVELDTLFNLFAGAAESFAFAGADALGDEDNKDENHNGANMAALLQTLEA .. . :. Mb3121c|M.bovis_AF2122/97 CVSIAITSALLVAY-LPARSR--EEMFGG---GRGVAAG-VWAPRGTARS Rv3094c|M.tuberculosis_H37Rv CVSIAITSALLVAY-LPARSR--EEMFGG---GRGVAAG-VWAPRGTARS MAB_1422c|M.abscessus_ATCC_199 IFRTHFWFVEERLR-TLADPV--SAAWLTKVNEGNLFAN-AFSEKGSLAV MAV_3422|M.avium_104 ILRIHYALVEELQV-TPRRPG--SDRWIAVVAEGGLIGG-ANAEQSQKSV MSMEG_4094|M.smegmatis_MC2_155 ALRPTFLVAHQIAA-RHDVPL--RAVNLERLRNRALFAG-TGNERNGGAS TH_3393|M.thermoresistible__bu IPHSHFTFLEVLRL-QGTERQ--RGFFYGLVLEGALFAN-AQSERG-PHP Mvan_3173|M.vanbaalenii_PYR-1 LLLSHFVVAQAISG-LGHTQP--APRIYADLLAGAQLGN-ASAERGTAHA Mflv_4370|M.gilvum_PYR-GCK MFGTNNGIAGQVLVGYGTDEQ--KKTWLERIASGEIVASFALTEPGAGSN MMAR_4034|M.marinum_M MFGTNNGIAGQVLVGFGTDEQ--KARWLEPIASGDVVASFALTEPGAGSS MUL_3778|M.ulcerans_Agy99 TLEAGVGLGAMPIYRFGNEEQ--KSKWLPDLLAGRALAGFGLTEPGAGSD MLBr_00660|M.leprae_Br4923 CWGDVAMLLSIPYQGLGNAAISAVATNKQLERLGKVWAAMAITEPGFGSD . . Mb3121c|M.bovis_AF2122/97 VDG--------------GVVVSGRWPFCSG--INHADIMFAGCFVDDR-- Rv3094c|M.tuberculosis_H37Rv VDG--------------GVVVSGRWPFCSG--INHADIMFAGCFVDDR-- MAB_1422c|M.abscessus_ATCC_199 GSLVFNTRLLPVGD---AYRLNGEKFYSTG--TLFADYLTVTATTDRD-- MAV_3422|M.avium_104 GGNHRDTRLVTTPD---GLRLRGRKFYSTG--AQFSDYLRITAQDDDG-- MSMEG_4094|M.smegmatis_MC2_155 GSVSTTARRVEG-----GYVINGRKYYSTG--GLYASYFSAQALTEDG-- TH_3393|M.thermoresistible__bu IDVDTTVLLRRGAG---DYLLTGRKFYSTG--ALFADWIVVRASVPADAA Mvan_3173|M.vanbaalenii_PYR-1 LDRRTTVTRRD--G---HWVLNGTKYYATG--TLGATWIAVAARIEGREN Mflv_4370|M.gilvum_PYR-GCK PSGLRTKAVRDGDGPHSGWILNGQKRFITN--APNADLFVTFARSRPADD MMAR_4034|M.marinum_M PAGLRTKAVRDGDD----WLITGQKRFITN--APVADLFVVFARTRPASD MUL_3778|M.ulcerans_Agy99 AGSTRTTARLDGGE----WVVNGSKQFITNSGTDITSLVTITAVTGSIAD MLBr_00660|M.leprae_Br4923 SAAVSTTATLDGDE----YVINGEKIFVTAG--SRATHIVVWATLDKSLG : * : : : . . Mb3121c|M.bovis_AF2122/97 ---------QVPSVVALNKDELQVLDTWHTLGLRGTGSHDCVADDVFVPA Rv3094c|M.tuberculosis_H37Rv ---------QVPSVVALNKDELQVLDTWHTLGLRGTGSHDCVADDVFVPA MAB_1422c|M.abscessus_ATCC_199 --------SVASVIVPGDRDGVRLVDDWDGFGQRRTGTGTTIFSQVDVAA MAV_3422|M.avium_104 --------APTAVVIPVDRAGVEHLDDWDGIGQRQTGSGTTVFNDVAVAD MSMEG_4094|M.smegmatis_MC2_155 --------TVVHFTVPVDRPGVDRLDDFDAIGQRLTQSGSTQLTEVRVDD TH_3393|M.thermoresistible__bu DAPTAATPKAVAFVPRHAPGLTV-IDDWDGMGQRTTASGSVTLDEVRVPA Mvan_3173|M.vanbaalenii_PYR-1 GD------TATAFVRPDQEGVTLDLESWSAFGQRGTASGEVRLNNVVVDD Mflv_4370|M.gilvum_PYR-GCK KGA-----GIAVFLVPADTPGVDIGAKDKKMGQEGAWTADVNFTDVEVPD MMAR_4034|M.marinum_M KSP-----GIAVFLVPAQSAGVEVGAKDAKMGQEGAWTADVSFTDVRVDD MUL_3778|M.ulcerans_Agy99 GKK-----EISTIIVPSGTPGFIVEPVYNKVGWNASDTHPLSFDDARVPE MLBr_00660|M.leprae_Br4923 ------HAAIKSFIVPREHPGVTVERLEYKLGIRGSDTAAIRFDNVRIPK .* . : : :. : Mb3121c|M.bovis_AF2122/97 DRVFSVF--DGPIVDR-PLYRFPVFGFFALSIGAAALGNARAAIDDLVEL Rv3094c|M.tuberculosis_H37Rv DRVFSVF--DGPIVDR-PLYRFPVFGFFALSIGAAALGNARAAIDDLVEL MAB_1422c|M.abscessus_ATCC_199 DEILSETPYDAAPV---PTTQYASLQLYILAIVAGVLRAVVDDGEALLRS MAV_3422|M.avium_104 DEVFPLG--STIGV---NRARGALVQLYLHAVAAGILRSLTEDAAALVRG MSMEG_4094|M.smegmatis_MC2_155 DETVVMA--DSIPD---NPWRGSFAQLYLAAVQAGIAARALDDAVQYVRE TH_3393|M.thermoresistible__bu DHVV----PFTPIFRR-PTVYGARAQLWHAALDVGIATAALEEG-VRLAA Mvan_3173|M.vanbaalenii_PYR-1 DLLIDEGPPPDPITAD-PSVLGAFDQALHAAIDIGIARAALEDGAVFVRT Mflv_4370|M.gilvum_PYR-GCK TALVGGSEDLGYRA---AMTSLARGRVHIAALAVGAAQRALDESVAYAAT MMAR_4034|M.marinum_M AALVGGSEDIGYRA---AMTSLARGRVHIAAIAVGAAQRALDESVAYAST MUL_3778|M.ulcerans_Agy99 ENLLG-IRGKGYAN---FLSILDEGRIAIAALATGVAQGCVDESVKYAKE MLBr_00660|M.leprae_Br4923 DNLLGNPEIEVGKGFSGVMETFDNTRPIVAAMAVGVGRAALEEIRKILTD . :: . Mb3121c|M.bovis_AF2122/97 AGGK---------KGLGSTRTLAERSATQAAAATAESALGAARALFYEVI Rv3094c|M.tuberculosis_H37Rv AGGK---------KGLGSTRTLAERSATQAAAATAESALGAARALFYEVI MAB_1422c|M.abscessus_ATCC_199 RQRN---FSHALTERPVDDPLLQRTLGELSATAFAAEATVLAAADAIEAA MAV_3422|M.avium_104 RRRT---YTFASADTPTADPQLLQIVGEIDAVAYTAHALVRNAAAELAPA MSMEG_4094|M.smegmatis_MC2_155 KGRP---IKHSSATRSVDDPYIRQTVGEIAARAQGARAAVLLAAEALQNQ TH_3393|M.thermoresistible__bu RARP---HFESGAPVATDDPTLIQSAGEVAVTVRAAQALLGEAARAVD-- Mvan_3173|M.vanbaalenii_PYR-1 RSRPWKEALDAGIERADQEPHVVRRFGELTARLYALEALLARGTALID-- Mflv_4370|M.gilvum_PYR-GCK ATQG--------GTPIGDFQLVQAMLADQQTGVMAGRALVRDAARLWVT- MMAR_4034|M.marinum_M ATQG--------GVTIGSFQLVQAMLADQQTGVLAGRALVRDAARMWVS- MUL_3778|M.ulcerans_Agy99 RQSF--------GQPIGSYQAISFKIARMEARAHVARTAYYEAAAKMLA- MLBr_00660|M.leprae_Br4923 AGIE-----ICYDKPSHSQNAAAAEFLRMEADWEASYLLSLRAAWQADN- . : Mb3121c|M.bovis_AF2122/97 EAAWQVSHDAEAVPVTMRNRLRLAATHAVRTSADVVRSMYDLAGGTAIYD Rv3094c|M.tuberculosis_H37Rv EAAWQVSHDAEAVPVTMRNRLRLAATHAVRTSADVVRSMYDLAGGTAIYD MAB_1422c|M.abscessus_ATCC_199 TATLRDGVPDAQLAQEAQVAVAKAKVHIDAVALDAATKLLDLGGASAASR MAV_3422|M.avium_104 LQAARDTGIDPELEAAASIAAARVKVAIQEPALRAASRVFDAGGASAVQA MSMEG_4094|M.smegmatis_MC2_155 RGLRRE--QARHAGAEAAVTVAQAGVVAVESALRAAELLFDVGGGSITDR TH_3393|M.thermoresistible__bu -AATAD--LTEDTAAAASIAVATAKVAAERAALRASTALFELGGTRSATV Mvan_3173|M.vanbaalenii_PYR-1 -EAYAAPEVTRDAAAQASLTVAAAKALAQQDAVEIAGAIFELTGTSGTDG Mflv_4370|M.gilvum_PYR-GCK -------------GQDRRIAPSAAKLFCTEMAGKVADLAVQIHGGSGYMR MMAR_4034|M.marinum_M -------------GADRRIAPSAAKLFCTEMAGKVADLAVQIHGGSGYMR MUL_3778|M.ulcerans_Agy99 -------------GKPFKKEAAIAKMISSEAAMDNARDAAQVHGGYGFMN MLBr_00660|M.leprae_Br4923 -------------NIPNSKEASMSKAKAGRMASDVTLKAVELAGTAGYSE : : * Mb3121c|M.bovis_AF2122/97 NAPLQRRFRDAFTATAHFQVNEASRELPGRVLLDQPADVSML-- Rv3094c|M.tuberculosis_H37Rv NAPLQRRFRDAFTATAHFQVNEASRELPGRVLLDQPADVSML-- MAB_1422c|M.abscessus_ATCC_199 TRNLDRHWRNIRTISLHNPVHYKARVIGQNLLHGTPLPANAYF- MAV_3422|M.avium_104 SALLDRHWRNLRTLFSHNPTVYKARVLGDVVVNGAALPDTSFF- MSMEG_4094|M.smegmatis_MC2_155 SLGFDRHWRNARTAANHNPRQWKLAVAGAYHLVGEEPPTTGLF- TH_3393|M.thermoresistible__bu SANLSRFWRDARTHTLHDPTRWKLHHIGRYLLSGTRPPRHGQL- Mvan_3173|M.vanbaalenii_PYR-1 AVNLDRHWRNVRVHSLHDPARWKYVHLGNHTLHDTRPPRLGLIL Mflv_4370|M.gilvum_PYR-GCK EVPVERIYRDVRLLRLYEGTSEIQKLIIGGGLVKGAKGK----- MMAR_4034|M.marinum_M GVPVERIYRDVRLLRLYEGTSEIQQLIIGSNLIKAANR------ MUL_3778|M.ulcerans_Agy99 EYPVARHYRDSKILEIGEGTTEVQLMLIARSLGLS--------- MLBr_00660|M.leprae_Br4923 KALLEKWARDSKILDIFEGTQQIQQLVVARRLLGLSSSELK--- . : *: :