For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3393 | - | - | 100% (407) | Acyl-CoA dehydrogenase, type 2, C-terminal domain |
M. thermoresistible (build 8) | TH_3721 | - | 2e-36 | 35.22% (301) | PUTATIVE putative acyl-CoA dehydrogenase family protein |
M. thermoresistible (build 8) | TH_3059 | - | 3e-18 | 27.73% (375) | PUTATIVE pigment production hydroxylase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3302c | fadE25 | 2e-14 | 23.61% (377) | acyl-CoA dehydrogenase FADE25 |
M. gilvum PYR-GCK | Mflv_4548 | - | 2e-16 | 25.39% (386) | acyl-CoA dehydrogenase type 2 |
M. tuberculosis H37Rv | Rv3274c | fadE25 | 2e-14 | 23.61% (377) | acyl-CoA dehydrogenase FADE25 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-14 | 23.94% (376) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_1422c | - | 4e-53 | 37.34% (391) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_4030 | - | 2e-15 | 25.70% (358) | acyl-CoA dehydrogenase |
M. avium 104 | MAV_3422 | - | 3e-40 | 34.27% (356) | acyl-CoA dehydrogenase domain-containing protein |
M. smegmatis MC2 155 | MSMEG_2650 | - | 1e-166 | 72.93% (399) | acyl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_3895 | - | 5e-16 | 26.54% (358) | acyl-CoA dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_3173 | - | 1e-65 | 39.37% (414) | acyl-CoA dehydrogenase type 2 |
CLUSTAL 2.0.9 multiple sequence alignment TH_3393|M.thermoresistible__bu -----VTEPLTMARIVDTAEALAVAARLSGSFAAEASTRDAER--LLPYE MSMEG_2650|M.smegmatis_MC2_155 ------MTATSATRIGSAKDALIEAARLSAVFAEGAGARDADR--RLPHD Mvan_3173|M.vanbaalenii_PYR-1 -MATDITDRIPDTLLRTPADALAAAEEVAEAIAAGSAERERAG--AVLTP MAB_1422c|M.abscessus_ATCC_199 ------MTSAPSVLEIRALPGTDTYRNLLAQVAEGARDRDLD--DENPFD MAV_3422|M.avium_104 ------MPVAFHRQDT--PAGAAAVQPVLAEIAADYRLRLADGGTEPPLR Mb3302c|M.bovis_AF2122/97 MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE Rv3274c|M.tuberculosis_H37Rv MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE MMAR_4030|M.marinum_M MTKLAQT-----LGLTELQAEIVATVRQFVDKEVIPNASELERKDAYPHE MUL_3895|M.ulcerans_Agy99 MTKLAQT-----LGLTELQAEIVATVRQFVDKEVIPNASELERKDAYPHE Mflv_4548|M.gilvum_PYR-GCK ----------------MSERVLDRLNELAGQFKEQAVEAEKLG--KLPDA TH_3393|M.thermoresistible__bu QVCELKRSGLLTLSVPAEHGGLDVPATVLAEVFRLLAHGDPSVAQIPHSH MSMEG_2650|M.smegmatis_MC2_155 EIRALKESGLLAITVPVAHGGIDMPSTVLAEVIRLLSHGDSSIGQIPHSH Mvan_3173|M.vanbaalenii_PYR-1 QLRLVAESGLLGISVPTAHGGPGLPASTVVEVLRRLARADGAVGQLLLSH MAB_1422c|M.abscessus_ATCC_199 QVRLLKEAGFGRLRIPTELGGAGLSVRQLFSAIIDVAQADPIVAHIFRTH MAV_3422|M.avium_104 GLKLVRDHRLGALRLARELGGAGYTAPEFFDYLVALAAADPDLAHILRIH Mb3302c|M.bovis_AF2122/97 ALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVN Rv3274c|M.tuberculosis_H37Rv ALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVN MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN MMAR_4030|M.marinum_M IVEQMRSIGLFGLMIPEQYGGLGESLLTYALCVEELARGWMSVSGVLNTH MUL_3895|M.ulcerans_Agy99 IVEQTRSIGLFGLMIPEQYGGLGESLLTYALCVEELARGWMSVSGVLNTH Mflv_4548|M.gilvum_PYR-GCK TVKSMKSIGSIRLLQPKKHGGLEVHPREFAETVMATAALDPAAGWVNGVV : : . ** . : . : TH_3393|M.thermoresistible__bu FTFLEVLRLQGTERQRGFFYGLVLE-GALFANAQSERG-PHPIDVDTTVL MSMEG_2650|M.smegmatis_MC2_155 FTFLEALRLQGTESQRAFFYGLVLD-GALFANAQAERG-PHPTDVDTTTL Mvan_3173|M.vanbaalenii_PYR-1 FVVAQAISGLGHTQPAPRIYADLLA-GAQLGNASAERGTAHALDRRTTVT MAB_1422c|M.abscessus_ATCC_199 FWFVEERLRTLADPVSAAWLTKVNE-GNLFANAFSEKGSLAVGSLVFNTR MAV_3422|M.avium_104 YALVEELQVTPRRPGSDRWIAVVAE-GGLIGGANAEQSQKSVGGNHRDTR Mb3302c|M.bovis_AF2122/97 KLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRA Rv3274c|M.tuberculosis_H37Rv KLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRA MLBr_00737|M.leprae_Br4923 KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRA MMAR_4030|M.marinum_M FIVAYMLRQHGTEEQRQRFLPRMATGESRGAFSMSEPELGSDVAAIRTRA MUL_3895|M.ulcerans_Agy99 FIVAYMLRQHGTEEQRQRFLPRMATGESRGAFSMSEPELGSDVAAIRTRA Mflv_4548|M.gilvum_PYR-GCK GVHPYQLAYADPKVGEEIWADDIDT---WVASPYAPQG-----------V : . . : TH_3393|M.thermoresistible__bu LRRGAGDYLLTGRKFYSTGALFADWIVVRASVPADAADAPTAATPKAVAF MSMEG_2650|M.smegmatis_MC2_155 RPAGDG-YVLSGRKFYSTGALFADWILVRASLSDGSVTVPTASTPKAVAF Mvan_3173|M.vanbaalenii_PYR-1 RR--DGHWVLNGTKYYATGTLGATWIAVAARIEG------RENGDTATAF MAB_1422c|M.abscessus_ATCC_199 LLPVGDAYRLNGEKFYSTGTLFADYLTVTATTDR---------DSVASVI MAV_3422|M.avium_104 LVTTPDGLRLRGRKFYSTGAQFSDYLRITAQDDD---------GAPTAVV Mb3302c|M.bovis_AF2122/97 KADGD-HWILNGAKCWITNGGKSTWYTVMAVTDP-----DRGANGISAFM Rv3274c|M.tuberculosis_H37Rv KADGD-HWILNGAKCWITNGGKSTWYTVMAVTDP-----DRGANGISAFM MLBr_00737|M.leprae_Br4923 KADGD-DWILNGFKCWITNGGKSTWYTVMAVTDP-----DKGANGISAFI MMAR_4030|M.marinum_M TRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGA---AQPHRNLTAFL MUL_3895|M.ulcerans_Agy99 TRGADGNYTIDGQKMWLTNGGSSTLVAVLVRTDEGA---AQPHRNLTAFL Mflv_4548|M.gilvum_PYR-GCK AVPTDGGYIFTGRWQFSSGTDACDWIILGAMVGDAKG-VPLMPPQMLHMI : * : :. . : . . TH_3393|M.thermoresistible__bu VPRHA------PGLTV-IDDWDGMGQRTTASGSVTLDEVRVPAD------ MSMEG_2650|M.smegmatis_MC2_155 VPRDA------AGVTI-VDDWDGMGQRTTASGTVTLDDVQVPAE------ Mvan_3173|M.vanbaalenii_PYR-1 VRPDQ------EGVTLDLESWSAFGQRGTASGEVRLNNVVVDDD------ MAB_1422c|M.abscessus_ATCC_199 VPGDR------DGVRL-VDDWDGFGQRRTGTGTTIFSQVDVAAD------ MAV_3422|M.avium_104 IPVDR------AGVEH-LDDWDGIGQRQTGSGTTVFNDVAVADD------ Mb3302c|M.bovis_AF2122/97 VHKDD------EGFTV-GPKERKLGIKGSPTTELYFENCRIPGD------ Rv3274c|M.tuberculosis_H37Rv VHKDD------EGFTV-GPKERKLGIKGSPTTELYFENCRIPGD------ MLBr_00737|M.leprae_Br4923 VHKDD------EGFSI-GPKEKKLGIKGSPTTELYFDKCRIPGD------ MMAR_4030|M.marinum_M VEKPTGFGEVLPGLTI-PGKIDKLGYKGIDTTELIFDGYRATAD------ MUL_3895|M.ulcerans_Agy99 VEKPTGFGEVLPGLTI-PGKIDKLGYKGIDTTEVIFDGYRATAD------ Mflv_4548|M.gilvum_PYR-GCK LPRKD--------YQIVDDSWDVVGLRGTGSKDVIVDGAFVPTYRTMDGM : . .* : : .. TH_3393|M.thermoresistible__bu HVV----PFTPIFRRPTVYGARAQLW---HAALDVGIATAALEEG-VRLA MSMEG_2650|M.smegmatis_MC2_155 HVV----PFTAIFTEPTVYGSRAQLL---HTAIDVGIATAALDEG-VRQA Mvan_3173|M.vanbaalenii_PYR-1 LLIDEGPPPDPITADPSVLGAFDQAL---HAAIDIGIARAALEDGAVFVR MAB_1422c|M.abscessus_ATCC_199 EIL--SETPYDAAPVPTTQYASLQLY---ILAIVAGVLRAVVDDGEALLR MAV_3422|M.avium_104 EVF--PLG--STIGVNRARGALVQLY---LHAVAAGILRSLTEDAAALVR Mb3302c|M.bovis_AF2122/97 RIIG---EPGTGFKTALATLDHTRPT---IGAQAVGIAQGALDAAIAYTK Rv3274c|M.tuberculosis_H37Rv RIIG---EPGTGFKTALATLDHTRPT---IGAQAVGIAQGALDAAIAYTK MLBr_00737|M.leprae_Br4923 RIIG---EPGTGFKTALATLDHTRPT---IGAQAVGIAQGALDAAIVYTK MMAR_4030|M.marinum_M DILGG--TPGQGFFQMMDGIEVGRVN---VSARACGVGLRAFELAVRYAQ MUL_3895|M.ulcerans_Agy99 DILGG--TPGQGFFPMMDGIEVGRVN---VSARACGVGLRAFELAVRYAQ Mflv_4548|M.gilvum_PYR-GCK KVMDGSAQIEAGMTEPLYKMPWSTMFPLGISSATIGICEGALAAHLDYQR :. : *: TH_3393|M.thermoresistible__bu ARARP---HFESGAPVATDDPTLIQSAGEVAVTVRAAQALLGEAARAVDA MSMEG_2650|M.smegmatis_MC2_155 ARARP---HFESKVASVADDPTVVQAAGELAVTVRSAQALLAEAARQVDA Mvan_3173|M.vanbaalenii_PYR-1 TRSRPWKEALDAGIERADQEPHVVRRFGELTARLYALEALLARGTALIDE MAB_1422c|M.abscessus_ATCC_199 SRQRN---FSHALTERPVDDPLLQRTLGELSATAFAAEATVLAAADAIEA MAV_3422|M.avium_104 GRRRT---YTFASADTPTADPQLLQIVGEIDAVAYTAHALVRNAAAELAP Mb3302c|M.bovis_AF2122/97 DRKQFG--------ESISTFQAVQFMLADMAMKVEAARLMVYSAAARAER Rv3274c|M.tuberculosis_H37Rv DRKQFG--------ESISTFQAVQFMLADMAMKVEAARLMVYSAAARAER MLBr_00737|M.leprae_Br4923 DRKQFG--------ESISTFQSIQFMLADMAMKVEAARLIVYAAAARAER MMAR_4030|M.marinum_M QRHTFG--------KPIAEHQAISFQLAEMATKVEAAHLMMVHAARLKDS MUL_3895|M.ulcerans_Agy99 QRHTFG--------KPIAEHQAISFQLAEMATKVEAAHLMMVHAARLKDS Mflv_4548|M.gilvum_PYR-GCK ERVGAN-------GTAIKDDPYVMYAIGDAAAEIEASRNTLLSNVDRVYD * : .: : . : . TH_3393|M.thermoresistible__bu ATAD-----LTEDTAAAASIAVATAKVAAERAALRASTALFELGGTRSAT MSMEG_2650|M.smegmatis_MC2_155 ARAD-----LTDETAAAASIAVAVAKVAAVRASLDASSALFELGGTRSAS Mvan_3173|M.vanbaalenii_PYR-1 AYAAP---EVTRDAAAQASLTVAAAKALAQQDAVEIAGAIFELTGTSGTD MAB_1422c|M.abscessus_ATCC_199 ATATLRDGVPDAQLAQEAQVAVAKAKVHIDAVALDAATKLLDLGGASAAS MAV_3422|M.avium_104 ALQAARDTGIDPELEAAASIAAARVKVAIQEPALRAASRVFDAGGASAVQ Mb3302c|M.bovis_AF2122/97 GEPDLG-------------FISAASKCFASDVAMEVTTDAVQLFGGAGYT Rv3274c|M.tuberculosis_H37Rv GEPDLG-------------FISAASKCFASDVAMEVTTDAVQLFGGAGYT MLBr_00737|M.leprae_Br4923 GEPDLG-------------FISAASKCFASDIAMEVTTDAVQLFGGAGYT MMAR_4030|M.marinum_M GERND--------------VAAGMAKYLASEYCSEVTQQSFRIHGGYGYS MUL_3895|M.ulcerans_Agy99 GERND--------------VAAGMAKYLASEYCSEVTQQSFRIHGGYGYS Mflv_4548|M.gilvum_PYR-GCK IVDSGR------EVTFETRAAVRRSQIKAVWRAVAAVDQIFARSGGNALR : . . * . TH_3393|M.thermoresistible__bu VSANLSRFWRDART---HTLHDPTRWKLHHIGRYLLSGTRPPRHGQL- MSMEG_2650|M.smegmatis_MC2_155 AGGNLSRYWRDART---HTLHDSTRWKLRHIGRYTLSGTKPPRHSQI- Mvan_3173|M.vanbaalenii_PYR-1 GAVNLDRHWRNVRV---HSLHDPARWKYVHLGNHTLHDTRPPRLGLIL MAB_1422c|M.abscessus_ATCC_199 RTRNLDRHWRNIRT---ISLHNPVHYKARVIGQNLLHGTPLPANAYF- MAV_3422|M.avium_104 ASALLDRHWRNLRT---LFSHNPTVYKARVLGDVVVNGAALPDTSFF- Mb3302c|M.bovis_AF2122/97 TDFPVERFMRDAKI---TQIYEGTNQIQRVVMSRALLR---------- Rv3274c|M.tuberculosis_H37Rv TDFPVERFMRDAKI---TQIYEGTNQIQRVVMSRALLR---------- MLBr_00737|M.leprae_Br4923 SDFPVERFMRDAKI---TQIYEGTNQIQRVVMSRALLR---------- MMAR_4030|M.marinum_M KEYEIERLMRDAPF---LLIGEGTSEIQKSIISKRLLHEYRE------ MUL_3895|M.ulcerans_Agy99 KEYEIERLMRDAPF---LLIGEGTSEIQKSIISKRLLHEYRE------ Mflv_4548|M.gilvum_PYR-GCK MDKPLQRYWRDAHAGVAHAIHVPGTVYHASALSSLGVDPQGPLRAMI- :.* *: