For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3978 (-)

annotation: coenzyme F420-dependent oxidoreductase
coordinates: 4911283 - 4912131
length: 282

IEWFLFLPQLRLAVPEFVQRAMCAEDAGFDGVAFIDHLEAPGQRDESIWEAMSIATWVAAKTSRLRVGHL
VLCDAFRHPAVLAKQAVTLSAASGGRFELGLGAGSWPVEFTRFEVGQQNPVDRVRQLERDLRLIMRYWGD
TDEAQRPRPLYPIPLLLGGSGPRMMRLVAQYADWWNLQANQLDRLPRLASSVGSARISVQQMVGFVRSGE
DPASVREVSTRRFAHLGTGLVCGGAGEMIEHFAGLAAQGVQRFYVWFADFAAADTLAEFGESVIKEFADP
R*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3978--100% (282)coenzyme F420-dependent oxidoreductase
M. marinum MMMAR_2559-9e-2430.48% (315) oxidoreductase
M. marinum MMMAR_2729-1e-1833.67% (196) oxidoreductase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0815c-5e-2227.90% (319) hypothetical protein Mb0815c
M. gilvum PYR-GCKMflv_4098-7e-3231.33% (300) luciferase family protein
M. tuberculosis H37RvRv0791c-5e-2227.90% (319) hypothetical protein Rv0791c
M. leprae Br4923MLBr_00348-1e-0829.38% (177) putative coenzyme F420-dependent oxidoreductase
M. abscessus ATCC 19977MAB_0968c-1e-1934.18% (196) luciferase-like hypothetical protein
M. avium 104MAV_1632-1e-11973.21% (280) hypothetical protein MAV_1632
M. smegmatis MC2 155MSMEG_2996-1e-10465.58% (276) hypothetical protein MSMEG_2996
M. thermoresistible (build 8)TH_0538-1e-10265.23% (279) conserved hypothetical protein
M. ulcerans Agy99MUL_3839-1e-16097.87% (282) coenzyme F420-dependent oxidoreductase
M. vanbaalenii PYR-1Mvan_2247-2e-3331.91% (304) luciferase family protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb0815c|M.bovis_AF2122/97           -MNAKDDPHFGLMLAATVNGLAVGSYREMVVVSQTAEEYGFDSVWLCDHF
Rv0791c|M.tuberculosis_H37Rv        -MNAKDDPHFGLMLAATVNGLAVGSYREMVVVSQTAEEYGFDSVWLCDHF
MMAR_3978|M.marinum_M               ------MIEWFLFLPQLR-----LAVPEFVQRAMCAEDAGFDGVAFIDHL
MUL_3839|M.ulcerans_Agy99           ------MIEWFLFLPQLR-----LAVSEFVQRAMCAEDAGFDGVAFIDHL
MAV_1632|M.avium_104                ------MVEWYLFLPQVR-----LSAADIAERARRAEASGFDGIVFIDHL
MSMEG_2996|M.smegmatis_MC2_155      ------MTEWFLFLPQVR-----LEIGDIVERARIAEAAGFDGIAFIDHL
TH_0538|M.thermoresistible__bu      ------VAEWFLFLPQVR-----FRLAEIVERARVAETSGFDGIAFIDHL
Mflv_4098|M.gilvum_PYR-GCK          ----MRRPEIGVYLPQMG-----FSFDEVLHRARRCEDLGIDSLWLYDHL
Mvan_2247|M.vanbaalenii_PYR-1       ----MSRPEIGVYLPQMG-----FSFDELLHRARRCEKLGIDSLWLYDHL
MAB_0968c|M.abscessus_ATCC_199      -------MRFSIWGQTNQ------SWADLLDIAQYADDGTWRAFYAADHF
MLBr_00348|M.leprae_Br4923          MVERANAMKLGLQLGYWAAQ----PPGNAAELVAAAEGAGFDAVFTGEAW
                                            .  :               :       .:     ..   :  

Mb0815c|M.bovis_AF2122/97           LTISPGEYAKVAGIAADTGSATGTETGGAGQCAPSRSLPLLECWTALAAL
Rv0791c|M.tuberculosis_H37Rv        LTISPGEYAKVAGIAADTGSATGTETGGAGQCAPSRSLPLLECWTALAAL
MMAR_3978|M.marinum_M               EAPG------------------------------QRDESIWEAMSIATWV
MUL_3839|M.ulcerans_Agy99           EAPG------------------------------QRDESIWEAMSIATWV
MAV_1632|M.avium_104                EAPG------------------------------LRDENIWEAMGIATWV
MSMEG_2996|M.smegmatis_MC2_155      EAPG------------------------------ATHQGIWEAMTTATWV
TH_0538|M.thermoresistible__bu      EAPG------------------------------ATHQGIWEAMTVATWV
Mflv_4098|M.gilvum_PYR-GCK          YGPG------------------------------MPDYPSMEAWTLATAL
Mvan_2247|M.vanbaalenii_PYR-1       YGPG------------------------------MPDYPSMEAWTLATAL
MAB_0968c|M.abscessus_ATCC_199      MSHADT---------------------------AEERTDFHEATALFAAL
MLBr_00348|M.leprae_Br4923          GSDA---------------------------------------YTPLAWW
                                       .                                           :  

Mb0815c|M.bovis_AF2122/97           SRDTTKLRLGTSVLCNSYRHPSVLAKMAATLDVISQGRLDLGLGAGWFRR
Rv0791c|M.tuberculosis_H37Rv        SRDTTKLRLGTSVLCNSYRHPSVLAKMAATLDVISQGRLDLGLGAGWFRR
MMAR_3978|M.marinum_M               AAKTSRLRVGHLVLCDAFRHPAVLAKQAVTLSAASGGRFELGLGAGSWPV
MUL_3839|M.ulcerans_Agy99           AAKTSRLRVGHLVLCDAFRHPAVLAKEAVTLSAASGGRFELGLGAGSWPV
MAV_1632|M.avium_104                AAKTERLRIGHLVLCDAFRHPAVLAKQAVTLSEASEGRFELGLGAGSWPA
MSMEG_2996|M.smegmatis_MC2_155      AAHTERLRIGHLVLCDAFRHPAVLAKQAVTLSTASDGRFELGLGSGSWPQ
TH_0538|M.thermoresistible__bu      AAHTERLRIGHLVLCDAFRHPAVLAKQAVTLAAATGGRFELGLGWGSWPQ
Mflv_4098|M.gilvum_PYR-GCK          LSRTERLRIGHMVLCNQFRHPVTLAKMVTTLDQISGGRLSLGIGSGSIED
Mvan_2247|M.vanbaalenii_PYR-1       LSRTDTLRVGHMVLCNQFRHPVTLAKMATTLDQISGGRLSLGIGSGSIED
MAB_0968c|M.abscessus_ATCC_199      AAATSRIRLAPLVLSMTFRHPAVLANWAATVDHVSQGRFTLGLGAGWQEN
MLBr_00348|M.leprae_Br4923          GSSTQRVRLGTSVVQLSARTPTACAMAALTLDHLSGGRHILGLGVSGPQV
                                       *  :*:.  *:    * * . *  . *:   : **  **:* .    

Mb0815c|M.bovis_AF2122/97           ESQAYGIPF-PPVGDR-------VSALAESLQVIKAVWTEPNPTYAGRFY
Rv0791c|M.tuberculosis_H37Rv        ESQAYGIPF-PPVGDR-------VSALAESLQVIKAVWTEPNPTYAGRFY
MMAR_3978|M.marinum_M               EFTRFEVGQ-QNPVDR-------VRQLERDLRLIMRYWGDT--DE-----
MUL_3839|M.ulcerans_Agy99           DFTRFEVGQ-QNPVDR-------VRQLERDLRLIMRYWGDT--DE-----
MAV_1632|M.avium_104                EFARFDVGQ-QDPKAR-------VAQLARHLELIKRYWGDDGRGE-----
MSMEG_2996|M.smegmatis_MC2_155      EFFRFGVDGGDDAAAR-------VDRLERDLALLREHWGEGERG------
TH_0538|M.thermoresistible__bu      EFDRFGIDDGHDAPAR-------VRRLARTLELLPRYWGADDHDDL----
Mflv_4098|M.gilvum_PYR-GCK          EHRRAGLPW-GTFAER-------SAQLGETLQILRQAFTDERVDFAGRHF
Mvan_2247|M.vanbaalenii_PYR-1       EHRRAGLPW-GSFAER-------SEQLGETLQILHQAFGDERIDFTGKHF
MAB_0968c|M.abscessus_ATCC_199      EHQRYGLEL-GKPGAR-------VDRFSEGLQVITGLLNEPVTTVDGQYY
MLBr_00348|M.leprae_Br4923          VEGWYGQPFPKPLSRTREYIDIVRQVWAREAPVVSDGQHYPLPLTGAGAT
                                                                .   ::                

Mb0815c|M.bovis_AF2122/97           TLDGATCDPPPVQRPHPPLWIGGEGDR-VQRIAAKHAQGLNVRWWSPQQV
Rv0791c|M.tuberculosis_H37Rv        TLDGATCDPPPVQRPHPPLWIGGEGDR-VQRIAAKHAQGLNVRWWSPQQV
MMAR_3978|M.marinum_M               -------AQRPRPLYPIPLLLGGSGPR-MMRLVAQYADWWNLQANQLDRL
MUL_3839|M.ulcerans_Agy99           -------AQRPRPWYPIPLLLGGSGPR-MMRLVAQYADWWNLQANQLDRL
MAV_1632|M.avium_104                -------AQAPRRSHPIPLVLGGSGPR-MMELVRTHADWWNLPANKLDKL
MSMEG_2996|M.smegmatis_MC2_155      --------QVPAPAHKIPLVIGGTGRR-TMGLVRRYADWWNIPSHQLDRL
TH_0538|M.thermoresistible__bu      -------VQQPVPEHPIPLVLGGTGKR-TMELVRQYAHWWNVPSHQLDRL
Mflv_4098|M.gilvum_PYR-GCK          TVTDFPIKPGPVQKSGPPIVVGGVGEKYTLPLVARYADVWNVPTYALDQI
Mvan_2247|M.vanbaalenii_PYR-1       TVTDMPIKPGPVQRPRPPIVVGGVGEKFTLPLVARYADVWNVPTYALGQI
MAB_0968c|M.abscessus_ATCC_199      RLAEGICEPKPLQR-PLPILIGATQPR-MLALTARYAHEWN-QWSSPGTF
MLBr_00348|M.leprae_Br4923          GLGKALKPITHPLRADIPIMLGAEGPK-NVALAAEICDGWLPIFFSPRMA
                                                     *: :*.   :    :.   ..            

Mb0815c|M.bovis_AF2122/97           TQRRGFLTQ--ASEAAGRDPDTLRLSVTLLLAPTQSGEEEVR--------
Rv0791c|M.tuberculosis_H37Rv        TQRRGFLTQ--ASEAAGRDPDTLRLSVTLLLAPTQSGEEEVR--------
MMAR_3978|M.marinum_M               PRLASSVG-------------SARISVQQMVGFVRSGEDPAS--------
MUL_3839|M.ulcerans_Agy99           PRLASSVG-------------SARISVQQMVGFVRSGEDSAS--------
MAV_1632|M.avium_104                PALAPAAG-------------SARLSIQQMVGFVRAGQDPEK--------
MSMEG_2996|M.smegmatis_MC2_155      PDLLPTVG-------------AARASMQQMVGFVGRGIDRAA--------
TH_0538|M.thermoresistible__bu      PELLPTIG-------------SARASVQQMVGFVGEDADRDA--------
Mflv_4098|M.gilvum_PYR-GCK          EPKIAVLRS--ICEDIGRDPDSIVLSIEAVMAVAPDQESLES--------
Mvan_2247|M.vanbaalenii_PYR-1       KEKIAALRS--ICEDVGRDPQTITLSIEAVMALAPDEASLPT--------
MAB_0968c|M.abscessus_ATCC_199      REVSGRLDA--AAEKIGRDPATIWRSTQARVIVTDGPQSEAR--------
MLBr_00348|M.leprae_Br4923          DMYNEWLDEGFARTGARRSREDFEICASAQIVVTEDRAAAFAGIKPFLAL
                                                             .    :  .                

Mb0815c|M.bovis_AF2122/97           ----------------IREEFAS---IPEPGL----IVGTPDRCVERIRE
Rv0791c|M.tuberculosis_H37Rv        ----------------IREEFAS---IPEPGL----IVGTPDRCVERIRE
MMAR_3978|M.marinum_M               ----------------VREVSTRRFAHLGTGL----VCGGAGEMIEHFAG
MUL_3839|M.ulcerans_Agy99           ----------------VREVSTRRFAHLGTGL----VCGGAGEMIEHFAG
MAV_1632|M.avium_104                ----------------VREVSTRRFGNLGSGL----VCGDADELIGHFSG
MSMEG_2996|M.smegmatis_MC2_155      ----------------VTERSSRLFGHLGSGL----VCGDAAELTEHFAG
TH_0538|M.thermoresistible__bu      ----------------VTEVSRRRFGHLGDGL----RCGDAAELADHFGA
Mflv_4098|M.gilvum_PYR-GCK          ----------------VRMLAEKRFRGPGFGLHDTGLIGTPAEIAAKLGR
Mvan_2247|M.vanbaalenii_PYR-1       ----------------VRSLAEKRFGGEGFGLHDTDLIGTPAEMVDRLGA
MAB_0968c|M.abscessus_ATCC_199      ----------------AAETAAASPIPVLYGT--------AERIAEQMAP
MLBr_00348|M.leprae_Br4923          YMGGMGAEGTNFHADVYRRMGYAEVVDEVTALFRSNQKDKAAEIIPNELV
                                                                  .         . .   .   

Mb0815c|M.bovis_AF2122/97           YQDRGVGHFLFTIPHVV----KSDYLHIIGSDIIPRVKTEVTIP-
Rv0791c|M.tuberculosis_H37Rv        YQDRGVGHFLFTIPHVV----KSDYLHIIGSDIIPRVKTEVTIP-
MMAR_3978|M.marinum_M               LAAQGVQRFYVWFADFA----AADTLAEFGESVIKEFADPR----
MUL_3839|M.ulcerans_Agy99           LAAQGVQRFYVWFADFA----AADTLAEFGESAIKEFADPR----
MAV_1632|M.avium_104                LAAQRVERFYVWFADFA----APDSLREFGESVITAFPAR-----
MSMEG_2996|M.smegmatis_MC2_155      LAAQGIERFYVWFADFA----APQTISEFAETVMHTGQKGTT---
TH_0538|M.thermoresistible__bu      LAAQGVERFYVWFADFA----QPQTLAEFADTVIRAR--------
Mflv_4098|M.gilvum_PYR-GCK          LVEIGFGQIVLFTHDRC----SDQTLELLASEIIPRL--------
Mvan_2247|M.vanbaalenii_PYR-1       LAEMGFGQIVLFTHDRC----SDQTLELLAAEVIPRL--------
MAB_0968c|M.abscessus_ATCC_199      WTQEGVDEVILPDHLLG----SGSARRDAYDALAQALRPLSNETD
MLBr_00348|M.leprae_Br4923          DSTMIVGDVDYVCKQIAAWSAAGVTMMMVSASSVEQVRDLAGLF-
                                         .  .