For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVEWYLFLPQVRLSAADIAERARRAEASGFDGIVFIDHLEAPGLRDENIWEAMGIATWVAAKTERLRIGH LVLCDAFRHPAVLAKQAVTLSEASEGRFELGLGAGSWPAEFARFDVGQQDPKARVAQLARHLELIKRYWG DDGRGEAQAPRRSHPIPLVLGGSGPRMMELVRTHADWWNLPANKLDKLPALAPAAGSARLSIQQMVGFVR AGQDPEKVREVSTRRFGNLGSGLVCGDADELIGHFSGLAAQRVERFYVWFADFAAPDSLREFGESVITAF PAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1632 | - | - | 100% (283) | hypothetical protein MAV_1632 |
M. avium 104 | MAV_0986 | - | 3e-15 | 26.36% (258) | hypothetical protein MAV_0986 |
M. avium 104 | MAV_2865 | - | 3e-14 | 32.28% (189) | hypothetical protein MAV_2865 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0815c | - | 3e-20 | 29.13% (254) | hypothetical protein Mb0815c |
M. gilvum PYR-GCK | Mflv_4098 | - | 1e-31 | 35.32% (252) | luciferase family protein |
M. tuberculosis H37Rv | Rv0791c | - | 3e-20 | 29.13% (254) | hypothetical protein Rv0791c |
M. leprae Br4923 | MLBr_00348 | - | 9e-09 | 28.80% (184) | putative coenzyme F420-dependent oxidoreductase |
M. abscessus ATCC 19977 | MAB_0968c | - | 3e-18 | 32.61% (184) | luciferase-like hypothetical protein |
M. marinum M | MMAR_3978 | - | 1e-119 | 73.21% (280) | coenzyme F420-dependent oxidoreductase |
M. smegmatis MC2 155 | MSMEG_2996 | - | 1e-105 | 67.63% (278) | hypothetical protein MSMEG_2996 |
M. thermoresistible (build 8) | TH_0538 | - | 1e-104 | 67.26% (281) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3839 | - | 1e-117 | 71.79% (280) | coenzyme F420-dependent oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_2247 | - | 1e-31 | 31.25% (304) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0815c|M.bovis_AF2122/97 -MNAKDDPHFGLMLAATVNGLAVGSYREMVVVSQTAEEYGFDSVWLCDHF Rv0791c|M.tuberculosis_H37Rv -MNAKDDPHFGLMLAATVNGLAVGSYREMVVVSQTAEEYGFDSVWLCDHF MMAR_3978|M.marinum_M ------MIEWFLFLPQLR-----LAVPEFVQRAMCAEDAGFDGVAFIDHL MUL_3839|M.ulcerans_Agy99 ------MIEWFLFLPQLR-----LAVSEFVQRAMCAEDAGFDGVAFIDHL MAV_1632|M.avium_104 ------MVEWYLFLPQVR-----LSAADIAERARRAEASGFDGIVFIDHL MSMEG_2996|M.smegmatis_MC2_155 ------MTEWFLFLPQVR-----LEIGDIVERARIAEAAGFDGIAFIDHL TH_0538|M.thermoresistible__bu ------VAEWFLFLPQVR-----FRLAEIVERARVAETSGFDGIAFIDHL Mflv_4098|M.gilvum_PYR-GCK ----MRRPEIGVYLPQMG-----FSFDEVLHRARRCEDLGIDSLWLYDHL Mvan_2247|M.vanbaalenii_PYR-1 ----MSRPEIGVYLPQMG-----FSFDELLHRARRCEKLGIDSLWLYDHL MAB_0968c|M.abscessus_ATCC_199 -------MRFSIWGQTNQ------SWADLLDIAQYADDGTWRAFYAADHF MLBr_00348|M.leprae_Br4923 MVERANAMKLGLQLGYWAAQ----PPGNAAELVAAAEGAGFDAVFTGEAW . : : .: .. : Mb0815c|M.bovis_AF2122/97 LTISPGEYAKVAGIAADTGSATGTETGGAGQCAPSRSLPLLECWTALAAL Rv0791c|M.tuberculosis_H37Rv LTISPGEYAKVAGIAADTGSATGTETGGAGQCAPSRSLPLLECWTALAAL MMAR_3978|M.marinum_M EAPG------------------------------QRDESIWEAMSIATWV MUL_3839|M.ulcerans_Agy99 EAPG------------------------------QRDESIWEAMSIATWV MAV_1632|M.avium_104 EAPG------------------------------LRDENIWEAMGIATWV MSMEG_2996|M.smegmatis_MC2_155 EAPG------------------------------ATHQGIWEAMTTATWV TH_0538|M.thermoresistible__bu EAPG------------------------------ATHQGIWEAMTVATWV Mflv_4098|M.gilvum_PYR-GCK YGPG------------------------------MPDYPSMEAWTLATAL Mvan_2247|M.vanbaalenii_PYR-1 YGPG------------------------------MPDYPSMEAWTLATAL MAB_0968c|M.abscessus_ATCC_199 MSHADT---------------------------AEERTDFHEATALFAAL MLBr_00348|M.leprae_Br4923 GSDA---------------------------------------YTPLAWW . : Mb0815c|M.bovis_AF2122/97 SRDTTKLRLGTSVLCNSYRHPSVLAKMAATLDVISQGRLDLGLGAGWFRR Rv0791c|M.tuberculosis_H37Rv SRDTTKLRLGTSVLCNSYRHPSVLAKMAATLDVISQGRLDLGLGAGWFRR MMAR_3978|M.marinum_M AAKTSRLRVGHLVLCDAFRHPAVLAKQAVTLSAASGGRFELGLGAGSWPV MUL_3839|M.ulcerans_Agy99 AAKTSRLRVGHLVLCDAFRHPAVLAKEAVTLSAASGGRFELGLGAGSWPV MAV_1632|M.avium_104 AAKTERLRIGHLVLCDAFRHPAVLAKQAVTLSEASEGRFELGLGAGSWPA MSMEG_2996|M.smegmatis_MC2_155 AAHTERLRIGHLVLCDAFRHPAVLAKQAVTLSTASDGRFELGLGSGSWPQ TH_0538|M.thermoresistible__bu AAHTERLRIGHLVLCDAFRHPAVLAKQAVTLAAATGGRFELGLGWGSWPQ Mflv_4098|M.gilvum_PYR-GCK LSRTERLRIGHMVLCNQFRHPVTLAKMVTTLDQISGGRLSLGIGSGSIED Mvan_2247|M.vanbaalenii_PYR-1 LSRTDTLRVGHMVLCNQFRHPVTLAKMATTLDQISGGRLSLGIGSGSIED MAB_0968c|M.abscessus_ATCC_199 AAATSRIRLAPLVLSMTFRHPAVLANWAATVDHVSQGRFTLGLGAGWQEN MLBr_00348|M.leprae_Br4923 GSSTQRVRLGTSVVQLSARTPTACAMAALTLDHLSGGRHILGLGVSGPQV * :*:. *: * * . * . *: : ** **:* . Mb0815c|M.bovis_AF2122/97 ESQAYGIPF-PPVGDR-------VSALAESLQVIKAVWTEPNPTYAGRFY Rv0791c|M.tuberculosis_H37Rv ESQAYGIPF-PPVGDR-------VSALAESLQVIKAVWTEPNPTYAGRFY MMAR_3978|M.marinum_M EFTRFEVGQ-QNPVDR-------VRQLERDLRLIMRYWGDT--DE----- MUL_3839|M.ulcerans_Agy99 DFTRFEVGQ-QNPVDR-------VRQLERDLRLIMRYWGDT--DE----- MAV_1632|M.avium_104 EFARFDVGQ-QDPKAR-------VAQLARHLELIKRYWGDDGRGE----- MSMEG_2996|M.smegmatis_MC2_155 EFFRFGVDGGDDAAAR-------VDRLERDLALLREHWGEGERG------ TH_0538|M.thermoresistible__bu EFDRFGIDDGHDAPAR-------VRRLARTLELLPRYWGADDHDDL---- Mflv_4098|M.gilvum_PYR-GCK EHRRAGLPW-GTFAER-------SAQLGETLQILRQAFTDERVDFAGRHF Mvan_2247|M.vanbaalenii_PYR-1 EHRRAGLPW-GSFAER-------SEQLGETLQILHQAFGDERIDFTGKHF MAB_0968c|M.abscessus_ATCC_199 EHQRYGLEL-GKPGAR-------VDRFSEGLQVITGLLNEPVTTVDGQYY MLBr_00348|M.leprae_Br4923 VEGWYGQPFPKPLSRTREYIDIVRQVWAREAPVVSDGQHYPLPLTGAGAT . :: Mb0815c|M.bovis_AF2122/97 TLDGATCDPPPVQRPHPPLWIGGEGDR-VQRIAAKHAQGLNVRWWSPQQV Rv0791c|M.tuberculosis_H37Rv TLDGATCDPPPVQRPHPPLWIGGEGDR-VQRIAAKHAQGLNVRWWSPQQV MMAR_3978|M.marinum_M -------AQRPRPLYPIPLLLGGSGPR-MMRLVAQYADWWNLQANQLDRL MUL_3839|M.ulcerans_Agy99 -------AQRPRPWYPIPLLLGGSGPR-MMRLVAQYADWWNLQANQLDRL MAV_1632|M.avium_104 -------AQAPRRSHPIPLVLGGSGPR-MMELVRTHADWWNLPANKLDKL MSMEG_2996|M.smegmatis_MC2_155 --------QVPAPAHKIPLVIGGTGRR-TMGLVRRYADWWNIPSHQLDRL TH_0538|M.thermoresistible__bu -------VQQPVPEHPIPLVLGGTGKR-TMELVRQYAHWWNVPSHQLDRL Mflv_4098|M.gilvum_PYR-GCK TVTDFPIKPGPVQKSGPPIVVGGVGEKYTLPLVARYADVWNVPTYALDQI Mvan_2247|M.vanbaalenii_PYR-1 TVTDMPIKPGPVQRPRPPIVVGGVGEKFTLPLVARYADVWNVPTYALGQI MAB_0968c|M.abscessus_ATCC_199 RLAEGICEPKPLQR-PLPILIGATQPR-MLALTARYAHEWN-QWSSPGTF MLBr_00348|M.leprae_Br4923 GLGKALKPITHPLRADIPIMLGAEGPK-NVALAAEICDGWLPIFFSPRMA *: :*. : :. .. Mb0815c|M.bovis_AF2122/97 TQRRGFLTQ--ASEAAGRDPDTLRLSVTLLLAPTQSGEEEVR-------- Rv0791c|M.tuberculosis_H37Rv TQRRGFLTQ--ASEAAGRDPDTLRLSVTLLLAPTQSGEEEVR-------- MMAR_3978|M.marinum_M PRLASSVG-------------SARISVQQMVGFVRSGEDPAS-------- MUL_3839|M.ulcerans_Agy99 PRLASSVG-------------SARISVQQMVGFVRSGEDSAS-------- MAV_1632|M.avium_104 PALAPAAG-------------SARLSIQQMVGFVRAGQDPEK-------- MSMEG_2996|M.smegmatis_MC2_155 PDLLPTVG-------------AARASMQQMVGFVGRGIDRAA-------- TH_0538|M.thermoresistible__bu PELLPTIG-------------SARASVQQMVGFVGEDADRDA-------- Mflv_4098|M.gilvum_PYR-GCK EPKIAVLRS--ICEDIGRDPDSIVLSIEAVMAVAPDQESLES-------- Mvan_2247|M.vanbaalenii_PYR-1 KEKIAALRS--ICEDVGRDPQTITLSIEAVMALAPDEASLPT-------- MAB_0968c|M.abscessus_ATCC_199 REVSGRLDA--AAEKIGRDPATIWRSTQARVIVTDGPQSEAR-------- MLBr_00348|M.leprae_Br4923 DMYNEWLDEGFARTGARRSREDFEICASAQIVVTEDRAAAFAGIKPFLAL . : . Mb0815c|M.bovis_AF2122/97 ----------------IREEFAS---IPEPGL----IVGTPDRCVERIRE Rv0791c|M.tuberculosis_H37Rv ----------------IREEFAS---IPEPGL----IVGTPDRCVERIRE MMAR_3978|M.marinum_M ----------------VREVSTRRFAHLGTGL----VCGGAGEMIEHFAG MUL_3839|M.ulcerans_Agy99 ----------------VREVSTRRFAHLGTGL----VCGGAGEMIEHFAG MAV_1632|M.avium_104 ----------------VREVSTRRFGNLGSGL----VCGDADELIGHFSG MSMEG_2996|M.smegmatis_MC2_155 ----------------VTERSSRLFGHLGSGL----VCGDAAELTEHFAG TH_0538|M.thermoresistible__bu ----------------VTEVSRRRFGHLGDGL----RCGDAAELADHFGA Mflv_4098|M.gilvum_PYR-GCK ----------------VRMLAEKRFRGPGFGLHDTGLIGTPAEIAAKLGR Mvan_2247|M.vanbaalenii_PYR-1 ----------------VRSLAEKRFGGEGFGLHDTDLIGTPAEMVDRLGA MAB_0968c|M.abscessus_ATCC_199 ----------------AAETAAASPIPVLYGT--------AERIAEQMAP MLBr_00348|M.leprae_Br4923 YMGGMGAEGTNFHADVYRRMGYAEVVDEVTALFRSNQKDKAAEIIPNELV . . . . Mb0815c|M.bovis_AF2122/97 YQDRGVGHFLFTIPHVV----KSDYLHIIGSDIIPRVKTEVTIP- Rv0791c|M.tuberculosis_H37Rv YQDRGVGHFLFTIPHVV----KSDYLHIIGSDIIPRVKTEVTIP- MMAR_3978|M.marinum_M LAAQGVQRFYVWFADFA----AADTLAEFGESVIKEFADPR---- MUL_3839|M.ulcerans_Agy99 LAAQGVQRFYVWFADFA----AADTLAEFGESAIKEFADPR---- MAV_1632|M.avium_104 LAAQRVERFYVWFADFA----APDSLREFGESVITAFPAR----- MSMEG_2996|M.smegmatis_MC2_155 LAAQGIERFYVWFADFA----APQTISEFAETVMHTGQKGTT--- TH_0538|M.thermoresistible__bu LAAQGVERFYVWFADFA----QPQTLAEFADTVIRAR-------- Mflv_4098|M.gilvum_PYR-GCK LVEIGFGQIVLFTHDRC----SDQTLELLASEIIPRL-------- Mvan_2247|M.vanbaalenii_PYR-1 LAEMGFGQIVLFTHDRC----SDQTLELLAAEVIPRL-------- MAB_0968c|M.abscessus_ATCC_199 WTQEGVDEVILPDHLLG----SGSARRDAYDALAQALRPLSNETD MLBr_00348|M.leprae_Br4923 DSTMIVGDVDYVCKQIAAWSAAGVTMMMVSASSVEQVRDLAGLF- . .