For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGPASESMEAAVF PYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTLVATNLLGQNTPAIAATEAAY GEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLASQSAAVTQAVGSTVGNLTQTELPQLMSAVP ASLQGLASPAAASPIDAIPGSGLLAALLNFLDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAM ADINAVALGAQESAAVPPMGSGEGNPSWIPAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRMS VPQSWGVATAVANHAGAAAPGGGWTSTAVVPEAAVGMPGIPGMPAGIYGHNLGNAPRYGFRPTIMGRPPA AG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2681 | - | - | 100% (422) | PPE family protein, PPE31_1 |
M. marinum M | MMAR_2682 | - | e-145 | 62.41% (423) | PPE family protein |
M. marinum M | MMAR_2683 | - | 1e-89 | 48.04% (433) | PPE family protein, PPE31 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1836 | PPE31 | 1e-94 | 47.94% (436) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 5e-28 | 29.04% (427) | PPE protein |
M. tuberculosis H37Rv | Rv1807 | PPE31 | 1e-94 | 47.94% (436) | PPE family protein |
M. leprae Br4923 | MLBr_01182 | - | 5e-43 | 32.58% (445) | PPE-family protein |
M. abscessus ATCC 19977 | MAB_0809c | - | 5e-29 | 28.61% (416) | PPE family protein |
M. avium 104 | MAV_2914 | - | 7e-88 | 44.86% (428) | PPE family protein |
M. smegmatis MC2 155 | MSMEG_0619 | - | 7e-29 | 29.30% (413) | PPE family protein |
M. thermoresistible (build 8) | TH_3113 | - | 5e-33 | 31.84% (424) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_3076 | - | 0.0 | 99.72% (355) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 1e-30 | 29.88% (425) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2681|M.marinum_M -------------MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAE MUL_3076|M.ulcerans_Agy99 -------------MDFAALPPEINPIRMYSGPGSAPMLAAVTAWDGLAAE Mb1836|M.bovis_AF2122/97 -------------MDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAE Rv1807|M.tuberculosis_H37Rv -------------LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAE MAV_2914|M.avium_104 ------------MIDFAALPPEINSARIYAGPGSAPMMSAAAAWNTMAAE MLBr_01182|M.leprae_Br4923 ------------MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKE Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE MAB_0809c|M.abscessus_ATCC_199 ---------MLAAPVWMASPPEVHSALLSSGPGPGPLLAAAAEWSSLGAH TH_3113|M.thermoresistible__bu ----------------MALPPEVHSTLLRTGPGPGALSAAADAWRMLSDE : .** :. : *.*...: :* * :. . MMAR_2681|M.marinum_M LRSTAAAYETVIAVLTGDGWLGPASESMEAAVFPYLAWMNITGMQAEQTA MUL_3076|M.ulcerans_Agy99 LRSTAAAYETVIAVLTGDGWLGPASESMEAAVFPYLAWMNITGMQAEQTA Mb1836|M.bovis_AF2122/97 LRASALSYSSVLSTLTGEEWHGPASASMTAAAAPYVAWMSVTAVRAEQAG Rv1807|M.tuberculosis_H37Rv LRASALSYSSVLSTLTGEEWHGPASASMTAAAAPYVAWMSVTAVRAEQAG MAV_2914|M.avium_104 MRSAAASYGAVISELTSADWFGPSSMSMLAAVTPYLTWLTDTATRAEEAA MLBr_01182|M.leprae_Br4923 LTAAAQGLQSAVEALLTT-FEGESAAALAERVTPYEKWLTQNAASAELTA Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA MAB_0809c|M.abscessus_ATCC_199 YSATAQELRAILAATHASAWHGPSAETYVAAHTPYLEWLNQGALESNARA TH_3113|M.thermoresistible__bu YRAAAVELAAVVSQTCATAWEGVGADAYAAAHGPYLFWLTDTAAAAAAAG ::* : : : * .: ** *: . . . MMAR_2681|M.marinum_M RQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTLVATNLLGQNTPAIAATE MUL_3076|M.ulcerans_Agy99 RQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTLVATNLLGQNTPAIAATE Mb1836|M.bovis_AF2122/97 AQAEAAAAAYEAAFAATVPPPVIEANRAQLMALIATNVLGQNAPAIAATE Rv1807|M.tuberculosis_H37Rv AQAEAAAAAYEAAFAATVPPPVIEANRAQLMALIATNVLGQNAPAIAATE MAV_2914|M.avium_104 AQANSAATAYEAAFAMTVPPAVVAANRAQLATLVATNVFGQNTPAIAATE MLBr_01182|M.leprae_Br4923 TQLTVAANAYETAFTMTVPPLMVFVNRAQACLLIMSNIFGQNSTAIAEKE Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE MAB_0809c|M.abscessus_ATCC_199 VQHGAAAGAYSTALAVMPTLAELAANHATHAALVATNFFGINTIPILATE TH_3113|M.thermoresistible__bu AQLEAAAAAHASALAAMPTMAELTANRTTHAALVATNFFGVNTIPIAVNE * ** *. :*:: . : *:: *: :*.:* *: .* .* MMAR_2681|M.marinum_M AAYGEMWAQDAAAMYGYAVGSAAAS-TLTQFTQPA--------------- MUL_3076|M.ulcerans_Agy99 AAYGEMWAQDAAAMYGYAVGSAAAS-TLTQFTQPA--------------- Mb1836|M.bovis_AF2122/97 AQYAEMWSQDAMAMYGYAGASAAAT-QLTPFTEPV--------------- Rv1807|M.tuberculosis_H37Rv AQYAEMWSQDAMAMYGYAGASAAAT-QLTPFTEPV--------------- MAV_2914|M.avium_104 AEYGQMWAQDAAAMNGYAVASTAAT-RLTPMTAPR--------------- MLBr_01182|M.leprae_Br4923 AEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPP--------------- Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVGEAGRAAA Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVGEAGRAAA MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVGEAGSASA MAB_0809c|M.abscessus_ATCC_199 ADYVRMWVQAATTMATYQTASEVALASAPPSTPPPSILHD---------- TH_3113|M.thermoresistible__bu ADYARMWIQAATTMATYEAVASAAVSATPRTVAPPPILGAGTGESATAAI * * .** * * :* * * . . MMAR_2681|M.marinum_M --QTTDPSGLASQS------------------------------------ MUL_3076|M.ulcerans_Agy99 --QTTDPSGLASQS------------------------------------ Mb1836|M.bovis_AF2122/97 --QTTNASGLAAQS------------------------------------ Rv1807|M.tuberculosis_H37Rv --QTTNASGLAAQS------------------------------------ MAV_2914|M.avium_104 --SNTSPEGVAAQA------------------------------------ MLBr_01182|M.leprae_Br4923 --LGVNEVGLAQEVVE---------------------------------- Mflv_0325|M.gilvum_PYR-GCK DMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLR--- Mvan_0415|M.vanbaalenii_PYR-1 DVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLR--- MSMEG_0619|M.smegmatis_MC2_155 SVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGG-QAILDFLK--- MAB_0809c|M.abscessus_ATCC_199 --HDHGHDDHDHEHGHDDDHG---------HGDLDPTDPEWWVHVAG--- TH_3113|M.thermoresistible__bu TGAHVTAELRAAESRTLLDEINELIDRLFAPLFPPGFADALPDGLLGTLL : MMAR_2681|M.marinum_M ------------------AAVTQAVGSTVGNLTQTELPQLMSAVPASLQG MUL_3076|M.ulcerans_Agy99 ------------------AAVTQAVGSTVGNLTQTELPQLMSAVPASLQG Mb1836|M.bovis_AF2122/97 ------------------AAIAHATGASAG-AQQTTLSQLIAAIPSVLQG Rv1807|M.tuberculosis_H37Rv ------------------AAIAHATGASAG-AQQTTLSQLIAAIPSVLQG MAV_2914|M.avium_104 ------------------TSVTNAAQAPAGTVQSTVS-------SSGLAG MLBr_01182|M.leprae_Br4923 ------------------EVVEEVVEEVVEAEQAISQAALDQAVNEGMEA Mflv_0325|M.gilvum_PYR-GCK -----------DPIGNTFALITDFLTNPVQALITWGPFLLAVVYQA---- Mvan_0415|M.vanbaalenii_PYR-1 -----------DPLGNTIKLITDFLTNPAQALITWGPFLAAVAYQA---- MSMEG_0619|M.smegmatis_MC2_155 -----------DPLGNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNL MAB_0809c|M.abscessus_ATCC_199 -----------EMVEHFELLLNNLLTDPAALLTNLPMVLADVAFHA---- TH_3113|M.thermoresistible__bu APLLPGATGDGPPMATIMSFLLMGLSNPAYLFPVLVYLLFTGVVHTTVAV : . MMAR_2681|M.marinum_M LASPAAASPIDAIPGSGLLAALLNFLDGNDGNPYGVFLNSSLVNGFVSAG MUL_3076|M.ulcerans_Agy99 LASPAAASPIDAIPGSGLLAALLNFLDGNDGNPYGVFLNSSLVNGFVSAG Mb1836|M.bovis_AF2122/97 LSSSTAATSASGP--SGLLGILGSGSSWLDKLWALLDPNSNFWNTIASSG Rv1807|M.tuberculosis_H37Rv LSSSTAATFASGP--SGLLGIVGSGSSWLDKLWALLDPNSNFWNTIASSG MAV_2914|M.avium_104 LLSGSDNS------------AFGTFTNGN-------FFSTAVVNGSLAGG MLBr_01182|M.leprae_Br4923 TVVPQVDQQVNVDVATPQTAVPDSSSAAAPQLWGGFAQHLSPINDTLSMI Mflv_0325|M.gilvum_PYR-GCK VSWVGASILYPSLFLLPLLATT---LAIVAGVG--QHLLSLLNTPPAEEA Mvan_0415|M.vanbaalenii_PYR-1 VSWVGASILYPSLLLLPLVATT---LAIVLGVG--AYLLENLPAPAEDAP MSMEG_0619|M.smegmatis_MC2_155 VGWPTWGMIFASPFLIPALAALGI-TGLVLLID--HVLNNPVDVPAEDEA MAB_0809c|M.abscessus_ATCC_199 AQLASTIGQFAPALIQPALALAIANLGWAAGFAGLAGIQPSPEILAVEPG TH_3113|M.thermoresistible__bu SGMLAQLVPLMPALLPVAVAALGGLAGVWAGLSGLAGLAGLTAVPAADGG MMAR_2681|M.marinum_M YVSPAVVGPAIWAAMADINAVALGAQESAAVPPMGSGEGNPSWIPAASPA MUL_3076|M.ulcerans_Agy99 YVSPAVVGPAIWAAMADINAVALGAQESAAVPPMGSGEGNPSWIPAASPA Mb1836|M.bovis_AF2122/97 LFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGGLG---------GALV Rv1807|M.tuberculosis_H37Rv LFLPSNTIAPFLGLLGGVAAADAAGDVLGEATSGGLG---------GALV MAV_2914|M.avium_104 PFNPQFIISSVQGVLAAQHATTLGGLGDFAADAEG-----------AATA MLBr_01182|M.leprae_Br4923 NNHAGMANAGLSLVNGMGSAMKSLAPTTTKAAESAFKAMG------SAVQ Mflv_0325|M.gilvum_PYR-GCK AEEPAPAQSAPSRPDQQSFPATMSAPPPPSGAPIAANTVSAGSPPAPGAP Mvan_0415|M.vanbaalenii_PYR-1 AEEPAASSPAPTRADQPSPAIAVSAPPPPSSAAATVGTVATGTAPAPGAP MSMEG_0619|M.smegmatis_MC2_155 PQEVAAAP----RTDQP-LAVGISPAGVPGSAATAAAPAPAPAGTTVAAP MAB_0809c|M.abscessus_ATCC_199 SVEDAPMAASAGTALAPSPPASAAAPAAPASAPAPTASGTAPAPPSP-PP TH_3113|M.thermoresistible__bu ASAAPVPAGGPSLPSGSSAPPAPTGSAAPTTGTAPGGAGSPPPAGHSVPP . MMAR_2681|M.marinum_M SPESLPVLGEETAATLGTGGISAGMNQAELVGRMSVPQSWG-----VATA MUL_3076|M.ulcerans_Agy99 SPESLPVLGEETAATLGTGGISAGMNQAELVGRMSVPQSWAWQQRWPITP Mb1836|M.bovis_AF2122/97 AP-----LG--SAGGLG-GTVAAGLGNAATVGTLSVPPSWT-----AAAP Rv1807|M.tuberculosis_H37Rv AP-----LG--SAGGLG-GTVAAGLGNAATVGTLSVPPSWT-----AAAP MAV_2914|M.avium_104 DL---------AASTGGSAPVAAGMGRAQLVGSLSVPQGWAN----AATI MLBr_01182|M.leprae_Br4923 ST------GRGLLGSSSGGHVTAQLGRAASIGSLRVPQTWTT----ASQP Mflv_0325|M.gilvum_PYR-GCK AAAAATFVPYVVAGRD-PYEGFSPTVRDSTGAKAPAGTIPAAASGIAASA Mvan_0415|M.vanbaalenii_PYR-1 AAATASFVPYAVAGRD-PGTGFSPTVRDSTSAKAPASGIPAAASGVAASA MSMEG_0619|M.smegmatis_MC2_155 APAAATFVPYAVANRD-PGEGFTPTLGNKSQVAAPASGVPAAASGVAASL MAB_0809c|M.abscessus_ATCC_199 VGDPGFSFPYAVGGGPRLGTGLALAAQVRRGTSAAARSSAREQAAAAETA TH_3113|M.thermoresistible__bu APHSAPPVGTSGPPYLIAAQPAPGVARRSAGARRAASIVEPAGSAAAAAA . . MMAR_2681|M.marinum_M VANHAGAAAPG-------------------GGWTSTAVVPEAAVG----M MUL_3076|M.ulcerans_Agy99 VRQPRAAAGPVRPL-----------SPKRQSGCPAFQVCPRAFTGTASAM Mb1836|M.bovis_AF2122/97 LASPLGSALGG---------------------TPMVAPPPAVAAG----M Rv1807|M.tuberculosis_H37Rv LASPLGSALGG---------------------TPMVAPPPAVAAG----M MAV_2914|M.avium_104 NPGQAAVPATG---------------------VTGLTDAASAAGG----- MLBr_01182|M.leprae_Br4923 VTAATRALSPAR-----------------VAVATESESAPLLGGG----L Mflv_0325|M.gilvum_PYR-GCK AERRKRRRRQKEEIKGRGYADAYADYEELPDDGPPEQPAPRVTASTRGAG Mvan_0415|M.vanbaalenii_PYR-1 AERRKRRRRQKDEIAGRAYADAYADYEPEPDDEPPVRQEPRIAATERGAG MSMEG_0619|M.smegmatis_MC2_155 ASRRKRRRKKGAQIEERGYADAYMDYEE-PDEDPAPQPEPRVRASERGSD MAB_0809c|M.abscessus_ATCC_199 AARQARRRRDKGKQQGRG-----IEYMDMNATARCEEPAPDTTASHRGAG TH_3113|M.thermoresistible__bu ARESAPIRRRRGQKDGLHG--------HRHEHQQPASMSAATAPSAAGIR . MMAR_2681|M.marinum_M PGIPGMPAGIYGHN--LGNAPRYGFRPTIMGRPPAAG------------- MUL_3076|M.ulcerans_Agy99 PPGTDSAQRSWGARQLLDDETEVTVTSTIGSGTAAATESASMTPSR---- Mb1836|M.bovis_AF2122/97 PGMPFGTMGGQGFG---RAVPQYGFRPNFVARPPAAG------------- Rv1807|M.tuberculosis_H37Rv PGMPFGTMGGQGFG---RAVPQYGFRPNFVARPPAAG------------- MAV_2914|M.avium_104 PGGVAGPVGGTGRR-LRRAIPKYGFRPVVMPRPPAAG------------- MLBr_01182|M.leprae_Br4923 PMAPMVPGGGSGTG-GVNTALRLQPRAFVMPRNPAAG------------- Mflv_0325|M.gilvum_PYR-GCK PMGFAGTVSRGDEQAGGLTTLA-GDSFGGGPREPMLPGTWDPDATDDRHT Mvan_0415|M.vanbaalenii_PYR-1 PMGFAGTVSRDAAQAGGLTTLP-GDPFGGGPKAPMLPGTWDPDTEPD--- MSMEG_0619|M.smegmatis_MC2_155 AMGFTGTVTRHDVTAAGLTTLT-GDTFDDRPVTPMLPGTWDGDENPAP-- MAB_0809c|M.abscessus_ATCC_199 TMGFAGTVIKTGATASGLAMLSRDDDLFEGVRAPMVPNTWDP-------- TH_3113|M.thermoresistible__bu VLGGAGRISRTRGSVPHAEITP-GDPTEPSSPTDRAHRPAEPN------- MMAR_2681|M.marinum_M --------------- MUL_3076|M.ulcerans_Agy99 --------------- Mb1836|M.bovis_AF2122/97 --------------- Rv1807|M.tuberculosis_H37Rv --------------- MAV_2914|M.avium_104 --------------- MLBr_01182|M.leprae_Br4923 --------------- Mflv_0325|M.gilvum_PYR-GCK DGRDGHDGHDGKEKP Mvan_0415|M.vanbaalenii_PYR-1 ---ERHNHHDGKDSQ MSMEG_0619|M.smegmatis_MC2_155 ----SPDDPEGGPRR MAB_0809c|M.abscessus_ATCC_199 ----EHGRQD----- TH_3113|M.thermoresistible__bu ---------------