For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_2669 (-)

annotation: PPE family protein, PPE25
coordinates: 3256977 - 3258233
length: 418

VFDFGALPPEINSGRMYTGPGSGPMMAAASAWDALAAELSSAASGYSSVIAELTSSPWLGPASRSMMSAV
APYVTWLSAAAAQTETAASQARAAAAAYETAFVMTVPPPVIAANRVLLMTLVATNFFGQNTPAIAATEAQ
YMEMWAQDAAAMYSYAGSSALATELPRFAPPPDTTSVNAAGGQSAVVAQAAATPAGDSAQTITATIPQLL
SSAGVPGLQQLSLSSVSSMSPSAASSPTVWQIIQTQVQNFLTYGLPTPDNNYAGLYPGMYNALRQTLQAY
FGVGIGNSGWSIAQQLTFGPGGTTAGAGGAWYPTPEFAALGADTWHWHPMASFASSSKVGGLSVPASWGT
APGAVEQASTKLVSTNFTTSPGEANPANGLNAALRGFPVGSRGAQRTGNLGVRYGFRYPVLTRPPSAG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_2669--100% (418)PPE family protein, PPE25
M. marinum MMMAR_1905-2e-7944.05% (420) PPE family protein
M. marinum MMMAR_1095-2e-7843.06% (418) PPE family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1815PPE251e-10553.30% (424) PPE family protein
M. gilvum PYR-GCKMflv_0325-1e-3239.90% (198) PPE protein
M. tuberculosis H37RvRv1787PPE251e-10654.09% (416) PPE family protein
M. leprae Br4923MLBr_01182-4e-4733.49% (439) PPE-family protein
M. abscessus ATCC 19977MAB_0809c-6e-3241.07% (168) PPE family protein
M. avium 104MAV_2928-1e-12257.61% (427) PPE family protein
M. smegmatis MC2 155MSMEG_0619-4e-3641.33% (225) PPE family protein
M. thermoresistible (build 8)TH_3569-6e-3337.74% (212) PUTATIVE PPE protein
M. ulcerans Agy99MUL_3089-0.098.33% (418) PPE family protein
M. vanbaalenii PYR-1Mvan_0415-5e-3640.74% (216) PPE protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb1815|M.bovis_AF2122/97            -------------MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVE
Rv1787|M.tuberculosis_H37Rv         -------------MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVE
MMAR_2669|M.marinum_M               ------------MFDFGALPPEINSGRMYTGPGSGPMMAAASAWDALAAE
MUL_3089|M.ulcerans_Agy99           ------------MFDFGALPPEINSGRMYTGPGSGPMMAAASAWDALAAE
MAV_2928|M.avium_104                ------------MFDFGALPPEINSGRMYAGPGSGPLMAAAAAWDEVAAE
MLBr_01182|M.leprae_Br4923          ------------MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKE
Mflv_0325|M.gilvum_PYR-GCK          MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE
Mvan_0415|M.vanbaalenii_PYR-1       ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE
MSMEG_0619|M.smegmatis_MC2_155      ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE
TH_3569|M.thermoresistible__bu      ---------MMTAPIWMALPPEVHSALLSSGPGPGSLLAAASAWHALSAE
MAB_0809c|M.abscessus_ATCC_199      ---------MLAAPVWMASPPEVHSALLSSGPGPGPLLAAAAEWSSLGAH
                                                   : * .** :*  :  ***...:::*.  *  :. .

Mb1815|M.bovis_AF2122/97            LGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAG
Rv1787|M.tuberculosis_H37Rv         LGLAATGYASVIAELTGAPWVGAASLSMVAAATPYVAWLSQAAARAEQAG
MMAR_2669|M.marinum_M               LSSAASGYSSVIAELTSSPWLGPASRSMMSAVAPYVTWLSAAAAQTETAA
MUL_3089|M.ulcerans_Agy99           LSSAASGYSLVIAELTSSPWLGPASRSMMSAVAPYVTWLSAAAAQTETAA
MAV_2928|M.avium_104                LGIAASGYHSVIAELTSGPWVGPASLSMVSAITPYVGWLSAVAAQAEETA
MLBr_01182|M.leprae_Br4923          LTAAAQGLQSAVEALLTT-FEGESAAALAERVTPYEKWLTQNAASAELTA
Mflv_0325|M.gilvum_PYR-GCK          YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA
Mvan_0415|M.vanbaalenii_PYR-1       YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA
MSMEG_0619|M.smegmatis_MC2_155      YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA
TH_3569|M.thermoresistible__bu      YASAAAELSSVLANVQAGSWEGPSAERYVAAHAPYLAWLTQQSANSAATA
MAB_0809c|M.abscessus_ATCC_199      YSATAQELRAILAATHASAWHGPSAETYVAAHTPYLEWLNQGALESNARA
                                       :*      :       : * ::       :**  **   :      .

Mb1815|M.bovis_AF2122/97            MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAE
Rv1787|M.tuberculosis_H37Rv         MQAAAAAAAYEAAFVMTVPPPVITANRVLVMTLIATNFFGQNSAAIAVAE
MMAR_2669|M.marinum_M               SQARAAAAAYETAFVMTVPPPVIAANRVLLMTLVATNFFGQNTPAIAATE
MUL_3089|M.ulcerans_Agy99           SQARAAAAAYETAFVMTVPPPVIAANRVLLMALVATNFFGQNTPAIAATE
MAV_2928|M.avium_104                SQGRAAAAAFEAAFAMTVPPPVIAANRVLLATLVATNFFGQNTPAIAATE
MLBr_01182|M.leprae_Br4923          TQLTVAANAYETAFTMTVPPLMVFVNRAQACLLIMSNIFGQNSTAIAEKE
Mflv_0325|M.gilvum_PYR-GCK          VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE
Mvan_0415|M.vanbaalenii_PYR-1       AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE
MSMEG_0619|M.smegmatis_MC2_155      VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE
TH_3569|M.thermoresistible__bu      GRHETAAAAYSTALATMPTMAELTLNKTTHAVLVATNFLGINTIPIALNE
MAB_0809c|M.abscessus_ATCC_199      VQHGAAAGAYSTALAVMPTLAELAANHATHAALVATNFFGINTIPILATE
                                     :  .** *: :*:.   .   :  *:.    *: :*::* *: .*   *

Mb1815|M.bovis_AF2122/97            AQYAEMWAQDAVAMYGYAAASASAS-RLIPFAAPPKTTN---SAGVVAQV
Rv1787|M.tuberculosis_H37Rv         AQYAEMWAQDAVAMYGYAAASASAS-RLIPFAAPPKTTN---SAGVVAQV
MMAR_2669|M.marinum_M               AQYMEMWAQDAAAMYSYAGSSALAT-ELPRFAPPPDTTSVNAAGGQSAVV
MUL_3089|M.ulcerans_Agy99           AQYMEMWAQDAAAMYSYAGSSAPAT-ELPRFAPPPDTTSVNAAGGQSAVV
MAV_2928|M.avium_104                AQYMEMWAQDAAAMYGYAAASQTAS-TLSPFAAPPNTTAPEGESDQAAAV
MLBr_01182|M.leprae_Br4923          AEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPPLGVN--EVGLAQEVV
Mflv_0325|M.gilvum_PYR-GCK          ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVGEAGRAAA
Mvan_0415|M.vanbaalenii_PYR-1       ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVGEAGRAAA
MSMEG_0619|M.smegmatis_MC2_155      ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVGEAGSASA
TH_3569|M.thermoresistible__bu      ADYVRMWIQAATSMSTYQAVAGTAVMSAPASSPAPLLLAPGVSEAADAMA
MAB_0809c|M.abscessus_ATCC_199      ADYVRMWVQAATTMATYQTASEVALASAPPSTPPPSILHD----------
                                    *:* .** * *.:*  *      *       :..*               

Mb1815|M.bovis_AF2122/97            AAVAAMPG--------------------------LLQRLSSAASVSWSNP
Rv1787|M.tuberculosis_H37Rv         AAVAAMPG--------------------------LLQRLSSAASVSWSNP
MMAR_2669|M.marinum_M               AQAAATPAGDSAQTITATIPQLLSSAGVPGLQQLSLSSVSSMSPSAASSP
MUL_3089|M.ulcerans_Agy99           AQAAATPAGDSAQTITATIPQLLSSAGVPGLQQRSLSSVSSMSPSAASSP
MAV_2928|M.avium_104                SQAMAQPAGSTAQTAANTSSQLATPQ---ALSAGTSQAATQASSSSASQT
MLBr_01182|M.leprae_Br4923          EEVVEEVVEEVVEAEQAISQAALDQAVNEGMEATVVPQVDQQVNVDVATP
Mflv_0325|M.gilvum_PYR-GCK          DMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRDPI
Mvan_0415|M.vanbaalenii_PYR-1       DVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDPL
MSMEG_0619|M.smegmatis_MC2_155      SVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGGQ-AILDFLKDPL
TH_3569|M.thermoresistible__bu      TTQQIGSQATAADSGTALNLSDLIANLLQYYQDYLDQLFGPIVDFLRDPI
MAB_0809c|M.abscessus_ATCC_199      --HDHGHDDHDHEHGHDDDHG---------HGDLDPTDPEWWVHVAGEMV
                                                                                      

Mb1815|M.bovis_AF2122/97            NDWWLVR-----LLGS-----------ITPTERTTIVRLLG-QSYFATGM
Rv1787|M.tuberculosis_H37Rv         NDWWLVR-----LLGS-----------ITPTERTTIVRLLG-QSYFATGM
MMAR_2669|M.marinum_M               TVWQIIQTQVQNFLTYGLPTPDNNYAGLYPGMYNALRQTLQ--AYFGVGI
MUL_3089|M.ulcerans_Agy99           TVWQIIQTQVQNFLTYGLPTPDNNYAGLYPGMYNALRQTLQ--AYFGVGI
MAV_2928|M.avium_104                GPFTWLTSALQNLQQSGLPTPTNNYLGLSPTFYTVMLKQTSGLGYFSNGI
MLBr_01182|M.leprae_Br4923          QTAVPDSSSAAAPQLWGGFAQHLSPINDTLSMINNHAGMANAGLSLVNGM
Mflv_0325|M.gilvum_PYR-GCK          GNTFALITDFLTNPVQALITWGPFLLAVVYQAVSWVGASILYPSLFLLPL
Mvan_0415|M.vanbaalenii_PYR-1       GNTIKLITDFLTNPAQALITWGPFLAAVAYQAVSWVGASILYPSLLLLPL
MSMEG_0619|M.smegmatis_MC2_155      GNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPF
TH_3569|M.thermoresistible__bu      GNLFQLIDDFLTNPAGALVTWWPLLFAVAYQVFTNLVGWPTWAMILASPV
MAB_0809c|M.abscessus_ATCC_199      EHFELLLNNLLTDPAALLTNLPMVLADVAFHAAQLASTIGQFAPALIQPA
                                                                                 :    

Mb1815|M.bovis_AF2122/97            AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRA--------VS
Rv1787|M.tuberculosis_H37Rv         AQFFASIAQQLTFGPGGTTAGSGGAWYPTPQFAGLGASRA--------VS
MMAR_2669|M.marinum_M               GNSGWSIAQQLTFGPGGTTAGAGGAWYPTPEFAALGADTW-----HWHPM
MUL_3089|M.ulcerans_Agy99           GNFGWSIAQQLTLGPGGTTAGAGGAWYPTPEFAALGADTW-----HWHPM
MAV_2928|M.avium_104                TAFWSQLAQQLVSGPGGSTAGAGGAWYPTPQFASLGLGNLGSVGGASHVS
MLBr_01182|M.leprae_Br4923          GSAMKSLAPTTTKAAESAFKAMGSAVQSTGRGLLGSSSGG-------HVT
Mflv_0325|M.gilvum_PYR-GCK          LATTLAIV----AGVGQHLLSLLNTP-PAEEAAEEPAPAQSAPSRPDQQS
Mvan_0415|M.vanbaalenii_PYR-1       VATTLAIV----LGVGAYLLENLPAP-AEDAPAEEPAASSPAPTRADQPS
MSMEG_0619|M.smegmatis_MC2_155      LIPALAAL----GITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAPRTDQP
TH_3569|M.thermoresistible__bu      LIPLAITL----GVAGLVMIADQAQP-----PAEEAAPEEDVAAP-----
MAB_0809c|M.abscessus_ATCC_199      LALAIANLGWAAGFAGLAGIQPSPEILAVEPGSVEDAPMAASAGTALAPS
                                                                                      

Mb1815|M.bovis_AF2122/97            ASLARANKIGALSVPPSWVKTTALTE-PGAHAVSANPTVGSS-----HGP
Rv1787|M.tuberculosis_H37Rv         ASLARANKIGALSVPPSWVKTTALTESPVAHAVSANPTVGSS-----HGP
MMAR_2669|M.marinum_M               ASFASSSKVGGLSVPASWGTAPGAVEQASTKLVSTNFTTSPGEANPANGL
MUL_3089|M.ulcerans_Agy99           ASFASSSKVGGLSVPASWGTTPGAVEQASTKLVSTNFTTSPGEANPANGL
MAV_2928|M.avium_104                AISAGAGRAGALSVPQQWATLTSAVSPAVSEEGSAVQAAAGG--APGGAA
MLBr_01182|M.leprae_Br4923          AQLGRAASIGSLRVPQTWTTASQPVTAATRALSPARVAVATESESAPLLG
Mflv_0325|M.gilvum_PYR-GCK          FPATMSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATFVPYVVAGRDPY
Mvan_0415|M.vanbaalenii_PYR-1       PAIAVSAPPPPSSAAATVGTVATGTAPAPGAPAAATASFVPYAVAGRDPG
MSMEG_0619|M.smegmatis_MC2_155      LAVGISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATFVPYAVANRDPG
TH_3569|M.thermoresistible__bu      --------------VRAEPQNPLPLTXXX---------------------
MAB_0809c|M.abscessus_ATCC_199      PPASAAAPAAPASAPAPTASGTAPAPPSPPPVGDPGFSFPYAVGGGPRLG
                                                         .                            

Mb1815|M.bovis_AF2122/97            HGLLRGLPLGSRITRRSGA-FAHRYGFRHSVVARPPSAG-----------
Rv1787|M.tuberculosis_H37Rv         HGLLRGLPLGSRITRRSGA-FAHRYGFRHSVVARPPSAG-----------
MMAR_2669|M.marinum_M               NAALRGFPVGSRGAQRTGN-LGVRYGFRYPVLTRPPSAG-----------
MUL_3089|M.ulcerans_Agy99           NAALRGFPVGSRGAQRTGN-LGVRYGFRYPVLTRPPSAG-----------
MAV_2928|M.avium_104                NGLLRGMPVGALGRRGAAAGYVNKYGFRYSVLTRPPSAG-----------
MLBr_01182|M.leprae_Br4923          GGLPMAPMVPGGGSGTGGVNTALRLQPRAFVMPRNPAAG-----------
Mflv_0325|M.gilvum_PYR-GCK          EGFSPTVRDSTGAKAPAGTIPAAASGIAASAAERRKRRRRQKEEIKGRGY
Mvan_0415|M.vanbaalenii_PYR-1       TGFSPTVRDSTSAKAPASGIPAAASGVAASAAERRKRRRRQKDEIAGRAY
MSMEG_0619|M.smegmatis_MC2_155      EGFTPTLGNKSQVAAPASGVPAAASGVAASLASRRKRRRKKGAQIEERGY
TH_3569|M.thermoresistible__bu      --------------------------------------------------
MAB_0809c|M.abscessus_ATCC_199      TGLALAAQVRRGTSAAARSSAREQAAAAETAAARQARRRRDKGKQQGRG-
                                                                                      

Mb1815|M.bovis_AF2122/97            --------------------------------------------------
Rv1787|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_2669|M.marinum_M               --------------------------------------------------
MUL_3089|M.ulcerans_Agy99           --------------------------------------------------
MAV_2928|M.avium_104                --------------------------------------------------
MLBr_01182|M.leprae_Br4923          --------------------------------------------------
Mflv_0325|M.gilvum_PYR-GCK          ADAYADYEELPDDGPPEQPAPRVTASTRGAGPMGFAGTVSRGDEQAGGLT
Mvan_0415|M.vanbaalenii_PYR-1       ADAYADYEPEPDDEPPVRQEPRIAATERGAGPMGFAGTVSRDAAQAGGLT
MSMEG_0619|M.smegmatis_MC2_155      ADAYMDYEE-PDEDPAPQPEPRVRASERGSDAMGFTGTVTRHDVTAAGLT
TH_3569|M.thermoresistible__bu      --------------------------------------------------
MAB_0809c|M.abscessus_ATCC_199      ----IEYMDMNATARCEEPAPDTTASHRGAGTMGFAGTVIKTGATASGLA
                                                                                      

Mb1815|M.bovis_AF2122/97            ----------------------------------------------
Rv1787|M.tuberculosis_H37Rv         ----------------------------------------------
MMAR_2669|M.marinum_M               ----------------------------------------------
MUL_3089|M.ulcerans_Agy99           ----------------------------------------------
MAV_2928|M.avium_104                ----------------------------------------------
MLBr_01182|M.leprae_Br4923          ----------------------------------------------
Mflv_0325|M.gilvum_PYR-GCK          TLA-GDSFGGGPREPMLPGTWDPDATDDRHTDGRDGHDGHDGKEKP
Mvan_0415|M.vanbaalenii_PYR-1       TLP-GDPFGGGPKAPMLPGTWDPDTEPD------ERHNHHDGKDSQ
MSMEG_0619|M.smegmatis_MC2_155      TLT-GDTFDDRPVTPMLPGTWDGDENPA------PSPDDPEGGPRR
TH_3569|M.thermoresistible__bu      ----------------------------------------------
MAB_0809c|M.abscessus_ATCC_199      MLSRDDDLFEGVRAPMVPNTWDPEHGRQD-----------------