For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MELQWPPACDAEAQRVWQRVLVPLAAEMGTQAADLAQRAVARMQAEVPQLFPDEQTVKENLVSTEASLRQ LAQVIEAGADPRQVELPPSTQAIARAAVPRQVALADLLRFYRLAQELVWQWMFGRITADSRDAAEQAKAV ELATGWIFGYVDAALMRAERAYDVEREAWLRGATVARASAIDDIVAERERDPQRASKRLRYDVSTQHLAV IAWIDRLPEDGDAQPLLGRVVADLARATAAQSTLVHTLGSLAVAGWVSGRGSLSVRDAQDGVAGAPAGVR LAVGDPARGLKGFRRSYLEATYAHRVASLMGRRADAVTLYRGVAVAALASADRDHAVFFATRVLGGLAAA DEDTYRIATTLAVFLAENRSRTRAAKRLNVHPNTVSYRVNQAEAILGRAVDADVLELSVALALLPVLPGL AQGRSGEL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2601 | - | - | 100% (428) | hypothetical protein MMAR_2601 |
M. marinum M | MMAR_4951 | - | e-113 | 53.81% (407) | hypothetical protein MMAR_4951 |
M. marinum M | MMAR_1323 | - | 1e-36 | 28.07% (399) | hypothetical protein MMAR_1323 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1226c | - | 8e-31 | 30.26% (304) | hypothetical protein Mb1226c |
M. gilvum PYR-GCK | Mflv_4621 | - | 4e-36 | 29.90% (418) | hypothetical protein Mflv_4621 |
M. tuberculosis H37Rv | Rv1194c | - | 8e-31 | 30.26% (304) | hypothetical protein Rv1194c |
M. leprae Br4923 | MLBr_01052 | - | 5e-25 | 28.70% (345) | hypothetical protein MLBr_01052 |
M. abscessus ATCC 19977 | MAB_2657c | - | 2e-28 | 24.34% (419) | hypothetical protein MAB_2657c |
M. avium 104 | MAV_4933 | - | 8e-06 | 26.32% (380) | hypothetical protein MAV_4933 |
M. smegmatis MC2 155 | MSMEG_6492 | - | 4e-09 | 26.18% (275) | GAF domain-containing protein |
M. thermoresistible (build 8) | TH_2938 | - | 5e-36 | 32.21% (357) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_0453 | - | 1e-107 | 52.27% (396) | hypothetical protein MUL_0453 |
M. vanbaalenii PYR-1 | Mvan_5765 | - | 2e-05 | 38.75% (80) | transcriptional regulator, CdaR |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2601|M.marinum_M -------------------------------------------------- MUL_0453|M.ulcerans_Agy99 -------------------------------------------------- Mflv_4621|M.gilvum_PYR-GCK -------------------------------------------------- TH_2938|M.thermoresistible__bu -------------------------------------------------- Mb1226c|M.bovis_AF2122/97 -------------------------------------------------- Rv1194c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_01052|M.leprae_Br4923 -------------------------------------------------- MAB_2657c|M.abscessus_ATCC_199 -------------------------------------------------- MSMEG_6492|M.smegmatis_MC2_155 ------------MTWLGALRRLSASATAEEDLSHVLAEIAETARSLLGFD Mvan_5765|M.vanbaalenii_PYR-1 MSSRTLSTALPFEHWLSALAEIGEAVGGDEPVAEVLDRVARTACTLLGYD MAV_4933|M.avium_104 -------------------------------------------------- MMAR_2601|M.marinum_M -------------------------------------------------- MUL_0453|M.ulcerans_Agy99 ------------------------------------------------MR Mflv_4621|M.gilvum_PYR-GCK -------------------------------------------------- TH_2938|M.thermoresistible__bu -------------------------------------------------- Mb1226c|M.bovis_AF2122/97 -------------------------------------------------- Rv1194c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_01052|M.leprae_Br4923 -------------------------------------------------- MAB_2657c|M.abscessus_ATCC_199 -------------------------------------------------- MSMEG_6492|M.smegmatis_MC2_155 FCGVLLPDEQSRHLRVRGASGLSSDYVDRVNSDRPLVLHGG----SPSSR Mvan_5765|M.vanbaalenii_PYR-1 FCAVFLPDEQGRALTIEGSYGLSADYIAQVNANRPILLDVRGDHEAPTSL MAV_4933|M.avium_104 -------------------------------------------------- MMAR_2601|M.marinum_M --------------MELQWPPACDAEAQRVWQRVLVPLAAEMGTQAADLA MUL_0453|M.ulcerans_Agy99 GRCAGSTTRLDFVDMKPRWPPFQEPSARRVWQQVLRPLAAEMQTCATQLA Mflv_4621|M.gilvum_PYR-GCK --------------------MLDSSEVQDTPGHAVHHLFRDLGDLVRELP TH_2938|M.thermoresistible__bu ---------------------------------------------VGYGP Mb1226c|M.bovis_AF2122/97 -----------------MAWQQPSPRIRELIREGARIALNPSPEWIEELD Rv1194c|M.tuberculosis_H37Rv -----------------MAWQQPSPRIRELIREGARIALNPSPEWIEELD MLBr_01052|M.leprae_Br4923 -----------------MARQHPSPRVRELIREGARIALNPTQEWIDQLD MAB_2657c|M.abscessus_ATCC_199 -MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLT MSMEG_6492|M.smegmatis_MC2_155 AFHTAEAVAIRDVTAEPGFELWAGIANEQGYRSMIAVPLVARGEVLGTLN Mvan_5765|M.vanbaalenii_PYR-1 AYRTGDVVTLEDIELVPDFT-WGGVAQEQGYRALISAPLRRPGTVVGALN MAV_4933|M.avium_104 ------MKDFRAPVNGVDGDSASALVAVPKSQGAQTIRPDSVSRLVGALL MMAR_2601|M.marinum_M QRAVARMQAEVPQLFPDEQTVKENLVSTEAS------------------- MUL_0453|M.ulcerans_Agy99 RDIVDRYQSELPSIVPDPPAVADQLASVEAS------------------- Mflv_4621|M.gilvum_PYR-GCK ESIHGLLIEQVAELAADQQLKELLSDTVAAN------------------- TH_2938|M.thermoresistible__bu GSRQG---------SGCRQLLELLRDSVEGN------------------- Mb1226c|M.bovis_AF2122/97 RATIAAN----PAIANDPVLAKVVQTANRAN------------------- Rv1194c|M.tuberculosis_H37Rv RATIAAN----PAIANDPVLAKVVQTANRAN------------------- MLBr_01052|M.leprae_Br4923 RATFAAN----PAIANDPVLAKVVRRASRAH------------------- MAB_2657c|M.abscessus_ATCC_199 AASLEDPR--YRTIADDPVIAEVDARLTVSN------------------- MSMEG_6492|M.smegmatis_MC2_155 GYYGAVHTYTRFEVERMTLLANHAAIAVSSARRLDELRALTASLRRQRDA Mvan_5765|M.vanbaalenii_PYR-1 GYRTAPHRFDRAEVSLVTTLATQVAIALGTA----QLRAKEQATIR---E MAV_4933|M.avium_104 DDHAAVVGRVRSVIRSRLPVYRSVADEALEA------------------- MMAR_2601|M.marinum_M LRQLAQVIEAGADPRQ-VELPPSTQAIARAAVPRQVALADLLRFYRLAQ- MUL_0453|M.ulcerans_Agy99 VRQIAECIDSGEGPRL-LDLTPATAAIGRSGVQRNIALNDLFRSVRMAQ- Mflv_4621|M.gilvum_PYR-GCK VDTWFSVVRHSIPFDR-MESPTAALEHARRMAQREVPVNALLRAYRLGH- TH_2938|M.thermoresistible__bu IDTIFSAIQHDIPIEE-VAPPTAALEYARRLARHGVEPHALLRAYRLGQ- Mb1226c|M.bovis_AF2122/97 LVYWAAANLRDPGARVPANLGTEPLRMARDLVRRGLDTVAFN-IYRTGE- Rv1194c|M.tuberculosis_H37Rv LVYWAAANLRDPGARVPANLGTEPLRMARDLVRRGLDTVAFN-IYRTGE- MLBr_01052|M.leprae_Br4923 LVHWATANLRDPGAPVPAHLGPEPLTMARDLVRRGRDVLALD-IYRVGQ- MAB_2657c|M.abscessus_ATCC_199 LKHWLTSNISEPGHRVRPATGSAMRTYARDVVLRGLTTDDIQ-SWRAVQ- MSMEG_6492|M.smegmatis_MC2_155 LTRSEQIHDRLLAVTLRSGGLDGIAAVLQGLIGRPILIDDIQHEVLACSV Mvan_5765|M.vanbaalenii_PYR-1 LRRAEEVHTLLTATALRGEGVSGVAAALSELLGRGVLIEDVYDEPLT--- MAV_4933|M.avium_104 ELEWVLRSAVGGREALHEPQIAGLAAIGEARARDGVPVDDMLRAWRIGV- . MMAR_2601|M.marinum_M ------ELVWQWMFGR------------------ITADSRDAAEQAKAVE MUL_0453|M.ulcerans_Agy99 ------ERTWQWLFDR------------------ITASS-AATDHDRALD Mflv_4621|M.gilvum_PYR-GCK ------QYGLNLIIAG------------------LRSADLPPEEKLALIE TH_2938|M.thermoresistible__bu ------QKLLDIVLHE------------------IRSLDWEREVSLEFVV Mb1226c|M.bovis_AF2122/97 ------HIGWRFWMGI------------------AFELTSDPQELRELLD Rv1194c|M.tuberculosis_H37Rv ------HIGWRFWMGI------------------AFELTSDPQELRELLD MLBr_01052|M.leprae_Br4923 ------YTAWRRWMEI------------------AFTLTSDPQELREILN MAB_2657c|M.abscessus_ATCC_199 ------RVGWKWWLAA------------------CFQVTDDKEQLCELIE MSMEG_6492|M.smegmatis_MC2_155 VTTDFPDTTWRAAAEAGTGSSPVPVGQFDGTTYLASAVHLGDEVAARIWF Mvan_5765|M.vanbaalenii_PYR-1 ------DANWTAPDPR-------------AQDHVVATVTLDGSPVARIHV MAV_4933|M.avium_104 ------EVVVECAREA------------------ARRLGVDDARVLELVQ MMAR_2601|M.marinum_M LATGWIFGYVDAALMRAERAYDVEREAWLRGATVARASAIDDIVAERERD MUL_0453|M.ulcerans_Agy99 LATNWLFGYVDVVLIRAERLYEVEREAWLTGAAAARAAAVEDILTEREDD Mflv_4621|M.gilvum_PYR-GCK HITRVSFRYIDWMSEQVLETYQTERAEWDERRRSLRAQAIRDILNGRDVD TH_2938|M.thermoresistible__bu GVTNATFGYIDGISQRVVEVYQQERERWLENRNSLRAMRVRELLDGGEVD Mb1226c|M.bovis_AF2122/97 VSARSVNDFIEATLTGIAAQVQSEHDELTRSTHAERLEVVGLILDGAPIS Rv1194c|M.tuberculosis_H37Rv VSARSVNDFIEATLTGIAAQVQSEHDELTRSTHAERLEVVGLILDGAPIS MLBr_01052|M.leprae_Br4923 VSAQSINEYVAATLEAIATHMQLERDELTRSTHAERLEVVDLILEGAPVT MAB_2657c|M.abscessus_ATCC_199 VTSNSLTTFVDDSIAELAEHVRRVREELAGGSQLQRYATVELLLQGADIA MSMEG_6492|M.smegmatis_MC2_155 PETSIDLDPIMVRAVEHASIVTALELLRCQTAAEVEQRLRGELLSDVLSS Mvan_5765|M.vanbaalenii_PYR-1 AASDSELSRLDVRAVEHATVVTALELLRARTAAEVEQRIRGSLVADLLSS MAV_4933|M.avium_104 SA----LAWSDIAMATSAKAHRRTERALALEAEESDAEFVRGALMG---S . : MMAR_2601|M.marinum_M PQRASKRLRYDVSTQHLAVIAWIDRLPEDG-DAQPLLGR------VVADL MUL_0453|M.ulcerans_Agy99 AQRASTRLRYDVNRHHVGVSVWRDVTQDAC-AGPVTLTE------ALTQL Mflv_4621|M.gilvum_PYR-GCK LTEASSAMRYFLGATHVALMVWLDRDAGADTDEFIAMER------FMQHA TH_2938|M.thermoresistible__bu VDTASATVGYPLRRTHLAVCVWTP-DGSAGDNELDRLQR------YVRGL Mb1226c|M.bovis_AF2122/97 PERAEAKLGYPLSRAHTAAIIWSD----ELDGDHSYLDR------AADLF Rv1194c|M.tuberculosis_H37Rv PERAEAKLGYPLSRAHTAAIIWSD----ELDGDHSYLDR------AADLF MLBr_01052|M.leprae_Br4923 QERAEARLGYRLGLTHTAAVIWSD----DLDGDHGYLDQ------AAEAF MAB_2657c|M.abscessus_ATCC_199 PARAEAQLGYALTGSHIGAVVWVD----SEK-EIAALER------ASEQV MSMEG_6492|M.smegmatis_MC2_155 GAALSDRLLDRAHRLGHDLTVPHIAIVGAFTGLDPVAERRAYERSLVLLA Mvan_5765|M.vanbaalenii_PYR-1 DDAGIPALLDRARRLGWDLSG-----VQSLIALRPADER-----TLAAAD MAV_4933|M.avium_104 LPAAELRMHAELRGLDPGAEYVAVRARLGGDGPHLRLEQ-------SLGF : . MMAR_2601|M.marinum_M ARATAAQ-STLVHTLGSLAVAGWVSGRGSLSVRDAQDG-VAG---APAGV MUL_0453|M.ulcerans_Agy99 TRAIAAQ-SVLAHPAGSKAIAGWLSRPQAFTAAELDAANICSGIHLPQDV Mflv_4621|M.gilvum_PYR-GCK VSATGAK-QSVYFSIDRLVGCAWMTVH--RPSDYLSQLRDFVR-AQPDGP TH_2938|M.thermoresistible__bu AEALGAPGDSLFIALDRLTGCGWIPLPGDAATGAVAGVRRYAA-EHPDGP Mb1226c|M.bovis_AF2122/97 CHAVGST-RPLTVVAGAASRWAWVTDADGLDIDTVQAAVDNAP-----GA Rv1194c|M.tuberculosis_H37Rv CHAVGST-RPLTVVAGAASRWAWVTDADGLDIDTVQAAVDNAP-----GA MLBr_01052|M.leprae_Br4923 SHVVEST-QQLIVVASAATRWVWLADALALDVPEVQKALLNLS-----KA MAB_2657c|M.abscessus_ATCC_199 MRACGAD-RRLTVVAGTVALWLWIPAKTTPTVAVLMDSLGRRS-----GV MSMEG_6492|M.smegmatis_MC2_155 KESAAHRPKPVVAMHAGTIVMLWPAQDAADAAGAGEVVRQAMR--AASAD Mvan_5765|M.vanbaalenii_PYR-1 RFTAGVTPHPLVALHRGDLVFVWPA-DTGPAVPVAHRLLEFLN--AATIP MAV_4933|M.avium_104 QDPAHSRRGLCALLDGDLAGFLIEPPRDVEGVVGFGPPRPLTR------- . MMAR_2601|M.marinum_M RLAVGDPARGLKGFRRSYLEATYAHRVASLM-GRRADAVTLYR--GVAVA MUL_0453|M.ulcerans_Agy99 RVAIGEPGWGISGFRRTHVEASHAQRFVSLL-GDRAEVVTCYR--NVAVA Mflv_4621|M.gilvum_PYR-GCK RLSVGEPLPGIEGFRRTYRQAEQARVVAVAADGSSRHRIVAARDPGVALA TH_2938|M.thermoresistible__bu HLALGDPLPGLDGFRRSYRQALRTRAVAVAA-GASAPRVTAAADPGLSAA Mb1226c|M.bovis_AF2122/97 RIAIGTTANGVEGFRRSHLEALITQRTLSRL----RSTQRVAFFADVKMV Rv1194c|M.tuberculosis_H37Rv RIAIGTTANGVEGFRRSHLEALITQRTLSRL----RSTQRVAFFADVKMV MLBr_01052|M.leprae_Br4923 RVAIGTSSAGIEGFRRSHLEALTAQRTLARL----KSHQQVAFFADVQLV MAB_2657c|M.abscessus_ATCC_199 RVALGRAATGMAGFRRTHMDAAAAQRLLARL----GSPLSVVRYEDVHLM MSMEG_6492|M.smegmatis_MC2_155 RQATVAVGPGDVASHR-ESYQTAKGALQVAIMSGRTAAVVGLDDLGIAGL Mvan_5765|M.vanbaalenii_PYR-1 EAPTAAVSRQAAARELPGIFRTVRGALDLAGDR-DTATVIDLDEPTIDHL MAV_4933|M.avium_104 ---------LSESYRMAARALVTAEACGLRG---------AYDIAALGLR . . : MMAR_2601|M.marinum_M ALASADRDHAVFFATRVLG-GLAAADEDTYRIATTLAVFLAENRSRTRAA MUL_0453|M.ulcerans_Agy99 ALAGTDRGHAVAFVRRVLG-PLAANDEGTYRIAATLAVYLEENRSPAKAA Mflv_4621|M.gilvum_PYR-GCK SMLMTDDATLKEWIHDVLG-PLAQNTASDQRLRDTLRVFLRAGSSFKAAA TH_2938|M.thermoresistible__bu ALLTGDLAEARTWVQEVLG-PLSADTKNDARLRETLGVFLRHGSSYTAAA Mb1226c|M.bovis_AF2122/97 ALISQNPDAASEFITSTLG-DLESASP---DLQTALLTFINEQCNASRAA Rv1194c|M.tuberculosis_H37Rv ALISQNPDAASEFITSTLG-DLESASP---DLQTALLTFINEQCNASRAA MLBr_01052|M.leprae_Br4923 SLITQNPEDAKEFITSTLG-DFESASP---ALQQTLLTFINEQCNASRAA MAB_2657c|M.abscessus_ATCC_199 DLLSADPASADQFVTDVLG-EFQSASP---VLHQTVLTYVEEALNRTSTA MSMEG_6492|M.smegmatis_MC2_155 LLRINDPAALSTFARRTLAPILDYDHAHRTELLVTLRAYLECRQERSATA Mvan_5765|M.vanbaalenii_PYR-1 LLQLDDPARLRDFASAVLGPAVDYDRTRSTELLHTVRVLLEHGLDRRAAA MAV_4933|M.avium_104 TAVAIDADVGELLRKRYLEPLSVGGSSR--ELIATVRTYLACGMHVERTA : * : :: . : :* MMAR_2601|M.marinum_M KRLNVHPNTVSYRVNQAEAILGRAVDADVLELSVALALLPVLPGLAQGRS MUL_0453|M.ulcerans_Agy99 QRLGVHP-------RAPALLISRLVSWGIVD------------------- Mflv_4621|M.gilvum_PYR-GCK NELQIHANTVKYRVNRALERRGRPIAAERLDVEVALLMCYWLGEVALNPT TH_2938|M.thermoresistible__bu DELNLHFNTVKYRVQRAVERRGRPIVPDRLDVELALLICQWFGAAVLRPQ Mb1226c|M.bovis_AF2122/97 KRLHTHRNTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHALS Rv1194c|M.tuberculosis_H37Rv KRLHTHRNTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHALS MLBr_01052|M.leprae_Br4923 KRLFTHRNTLLRRIESAEKLLPRPLDHTSVHIAVALEALQWRGDQTNTSG MAB_2657c|M.abscessus_ATCC_199 ERLYTHRNTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRAGR----- MSMEG_6492|M.smegmatis_MC2_155 TRLVIHPNTVAQRLRRIESLCSVTLTDPAVILQFSAALTVYDIAALD--- Mvan_5765|M.vanbaalenii_PYR-1 QALHLHPNTVAQRVRRLEELTGLSLARPADLLRLTAALTVSRIASLS--- MAV_4933|M.avium_104 TRLFVHQNTVRYRLARFEELTGASLRDTEVVTEVWWVLELAAMRL----- * * . MMAR_2601|M.marinum_M GEL-------- MUL_0453|M.ulcerans_Agy99 ----------- Mflv_4621|M.gilvum_PYR-GCK QALGRS----- TH_2938|M.thermoresistible__bu R---------- Mb1226c|M.bovis_AF2122/97 SPGRRSNSVPA Rv1194c|M.tuberculosis_H37Rv SPGRRSNSVPA MLBr_01052|M.leprae_Br4923 PRAGRNDGVPA MAB_2657c|M.abscessus_ATCC_199 ----------- MSMEG_6492|M.smegmatis_MC2_155 ----------- Mvan_5765|M.vanbaalenii_PYR-1 ----------- MAV_4933|M.avium_104 -----------