For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1127 (-)

annotation: hypothetical protein MMAR_1127
coordinates: 1351203 - 1352423
length: 406

VLWQGPSPRVGELIRQGAKAVLDGSQQWLDEYDRVTMAANPAIADDPVLAEATRRSIRSSLIHWAAANVS
NPGAPVAPNLGPEPLSIARDMVRRGLDPFTFRIAQTVGWRLWMGVAFGLTSDPDELRELFEVTYRSISEF
VEATSAGIAAQMQRERDELARGTHAERREVTALILDGAPISRQRAEARLGYALNRTHTAAVIWSDEPDGD
LNRLDRVVDAFGRAADFARPLTVIAGAATRWVWVANAANATLDVEQVEQAVRDVPGARIAIGAAATGIEG
FRRSHLEALTTQRMVAGLNSRQRVALFADIQLIALIAQNPEAANDFIKNTLGDFESAGAELHKTVLTFVN
EQCSIGRTTKVLYTHRNTLLRRLDRAQQLLPRPLDHSSVHVAVALEALQWRGNPPA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1127--100% (406)hypothetical protein MMAR_1127
M. marinum MMMAR_4242-e-14562.07% (406) transcriptional regulatory protein
M. marinum MMMAR_2258-e-12353.32% (407) transcriptional activator protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1226c-1e-14762.81% (406) hypothetical protein Mb1226c
M. gilvum PYR-GCKMflv_4621-4e-1624.21% (318) hypothetical protein Mflv_4621
M. tuberculosis H37RvRv1194c-1e-14762.81% (406) hypothetical protein Rv1194c
M. leprae Br4923MLBr_01052-1e-14060.05% (403) hypothetical protein MLBr_01052
M. abscessus ATCC 19977MAB_2657c-9e-7639.66% (406) hypothetical protein MAB_2657c
M. avium 104-----
M. smegmatis MC2 155MSMEG_2971-3e-0624.80% (246) regulatory protein
M. thermoresistible (build 8)TH_3143-3e-2228.57% (287) PUTATIVE putative conserved hypothetical protein
M. ulcerans Agy99MUL_0944-1e-14461.82% (406) transcriptional regulatory protein
M. vanbaalenii PYR-1Mvan_4407-4e-0528.03% (157) putative GAF sensor protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4621|M.gilvum_PYR-GCK          ----------------------------MLDSSEVQDTPGHAVHHLFRDL
TH_3143|M.thermoresistible__bu      ----------------------------VVVSGYNADDISSTVALIVDRL
Mb1226c|M.bovis_AF2122/97           -----------------------------MAWQQPSPRIRELIREGARIA
Rv1194c|M.tuberculosis_H37Rv        -----------------------------MAWQQPSPRIRELIREGARIA
MUL_0944|M.ulcerans_Agy99           -----------------------------MPWQRPSSRIRELIREGARRA
MLBr_01052|M.leprae_Br4923          -----------------------------MARQHPSPRVRELIREGARIA
MMAR_1127|M.marinum_M               -----------------------------MLWQGPSPRVGELIRQGAKAV
MAB_2657c|M.abscessus_ATCC_199      -------------MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKM
MSMEG_2971|M.smegmatis_MC2_155      MLSLSALLADPTLELTLLVPGSPGAVDREVLWLHNTELPDPSPYIRATEL
Mvan_4407|M.vanbaalenii_PYR-1       --------MSEPRSVIAAQTALIAALRDVVSARSVADVESATLAAVRSLL
                                                                                      

Mflv_4621|M.gilvum_PYR-GCK          GDLVRELPESIHGLLIEQV----------------------AELAADQQL
TH_3143|M.thermoresistible__bu      LENSGEDVERIQRRILADI----------------------DELRSDPRL
Mb1226c|M.bovis_AF2122/97           LNPSPEWIEELDRATIAAN----------------------PAIANDPVL
Rv1194c|M.tuberculosis_H37Rv        LNPSPEWIEELDRATIAAN----------------------PAIANDPVL
MUL_0944|M.ulcerans_Agy99           LNAGPEWIEELDRETVSAN----------------------PTIANDPVL
MLBr_01052|M.leprae_Br4923          LNPTQEWIDQLDRATFAAN----------------------PAIANDPVL
MMAR_1127|M.marinum_M               LDGSQQWLDEYDRVTMAAN----------------------PAIADDPVL
MAB_2657c|M.abscessus_ATCC_199      LARSGEVAGDLTAASLEDPRY--------------------RTIADDPVI
MSMEG_2971|M.smegmatis_MC2_155      VLTNGLWRGTVDSTMFVDALL--------------------RARAAGVVF
Mvan_4407|M.vanbaalenii_PYR-1       SADAAFWMDRVDDGFAMTALSGLIQPESHELSLVPPGAGLAAEIVANDAP
                                                                                  .   

Mflv_4621|M.gilvum_PYR-GCK          KELLSDTVAANVDTWFSV-VRHSIPFDRMESPTAA---------------
TH_3143|M.thermoresistible__bu      VELLRSSVAGNVETVLTV-IRYGIDLDRVEPPTAA---------------
Mb1226c|M.bovis_AF2122/97           AKVVQTANRANLVYWAAANLRDPGARVPANLGTEP---------------
Rv1194c|M.tuberculosis_H37Rv        AKVVQTANRANLVYWAAANLRDPGARVPANLGTEP---------------
MUL_0944|M.ulcerans_Agy99           AKVVKRVNRANLVHWAAANVRHPGAPVPANLGGEP---------------
MLBr_01052|M.leprae_Br4923          AKVVRRASRAHLVHWATANLRDPGAPVPAHLGPEP---------------
MMAR_1127|M.marinum_M               AEATRRSIRSSLIHWAAANVSNPGAPVAPNLGPEP---------------
MAB_2657c|M.abscessus_ATCC_199      AEVDARLTVSNLKHWLTSNISEPGHRVRPATGSAM---------------
MSMEG_2971|M.smegmatis_MC2_155      GLTEQTPAAPADLVEACSSAELPLATVSIAVPFTA---------------
Mvan_4407|M.vanbaalenii_PYR-1       ASSSDYTVDPRAIPAFAAMFRRENIRSTAGAPMRSSEGVVGVLFVFARRS
                                                                                      

Mflv_4621|M.gilvum_PYR-GCK          LEHARRMAQREVPVNALLRAYRLGHQYG----------------------
TH_3143|M.thermoresistible__bu      LEYARRAAQHGIALSALIRAYRLGQQEM----------------------
Mb1226c|M.bovis_AF2122/97           LRMARDLVRRGLDTVAFN-IYRTGEHIG----------------------
Rv1194c|M.tuberculosis_H37Rv        LRMARDLVRRGLDTVAFN-IYRTGEHIG----------------------
MUL_0944|M.ulcerans_Agy99           LRMARDLVRRGLEALTLD-IYRIGQYIA----------------------
MLBr_01052|M.leprae_Br4923          LTMARDLVRRGRDVLALD-IYRVGQYTA----------------------
MMAR_1127|M.marinum_M               LSIARDMVRRGLDPFTF----RIAQTVG----------------------
MAB_2657c|M.abscessus_ATCC_199      RTYARDVVLRGLTTDDIQ-SWRAVQRVG----------------------
MSMEG_2971|M.smegmatis_MC2_155      ITQAAARIQSDARQAALSKLVRRGNALASSIARGGGAEGILDVLRRDHDL
Mvan_4407|M.vanbaalenii_PYR-1       REFTEDEMQLLMSIAGVARALRERLREG----------------------
                                       :            .    *                            

Mflv_4621|M.gilvum_PYR-GCK          -------LNLIIAGLRSADLPPEEKLALIEHITRVSFRYIDWMS------
TH_3143|M.thermoresistible__bu      -------LERILREVRETELDPDLRLSVYERISSTSFAYIDWIS------
Mb1226c|M.bovis_AF2122/97           -------WRFWMGIAFELTSDPQELRELLDVSARSVNDFIEATL------
Rv1194c|M.tuberculosis_H37Rv        -------WRFWMGIAFELTSDPQELRELLDVSARSVNDFIEATL------
MUL_0944|M.ulcerans_Agy99           -------WRLWINIAFDLTSDPQELHELLDVSAKSVNEFIEATL------
MLBr_01052|M.leprae_Br4923          -------WRRWMEIAFTLTSDPQELREILNVSAQSINEYVAATL------
MMAR_1127|M.marinum_M               -------WRLWMGVAFGLTSDPDELRELFEVTYRSISEFVEATS------
MAB_2657c|M.abscessus_ATCC_199      -------WKWWLAACFQVTDDKEQLCELIEVTSNSLTTFVDDSI------
MSMEG_2971|M.smegmatis_MC2_155      PLLVVDRLGRRLAGDIGDDEDVQVAADALNRHPPPLEVALPSGD------
Mvan_4407|M.vanbaalenii_PYR-1       -----EFQRELLEQERSRAAAGDRLLRAAETFSSSMLRGQPLAAGLEAAS
                                               :          :      :                    

Mflv_4621|M.gilvum_PYR-GCK          --EQVLETYQTERAEWDERRRSLRAQAIRDILNGRD-----------VDL
TH_3143|M.thermoresistible__bu      --QQVSDTYDTERERWLEHRNNIRAVRVREILDSDEP----------IDI
Mb1226c|M.bovis_AF2122/97           --TGIAAQVQSEHDELTRSTHAERLEVVGLILDGAP-----------ISP
Rv1194c|M.tuberculosis_H37Rv        --TGIAAQVQSEHDELTRSTHAERLEVVGLILDGAP-----------ISP
MUL_0944|M.ulcerans_Agy99           --AGIAAQVQLEHDELTRGNHADRLEVVGHLLEGAP-----------ISR
MLBr_01052|M.leprae_Br4923          --EAIATHMQLERDELTRSTHAERLEVVDLILEGAP-----------VTQ
MMAR_1127|M.marinum_M               --AGIAAQMQRERDELARGTHAERREVTALILDGAP-----------ISR
MAB_2657c|M.abscessus_ATCC_199      --AELAEHVRRVREELAGGSQLQRYATVELLLQGAD-----------IAP
MSMEG_2971|M.smegmatis_MC2_155      --TASVYLVEGAMGDVDAGLFCLRPLPSLKPLERDALDQAARYLSLEVTR
Mvan_4407|M.vanbaalenii_PYR-1       DELGVRLHVRGLPAPGSPTSHMLPIEDAPTVSSGPEARIPG-ADLAVLSA
                                                                    .              :  

Mflv_4621|M.gilvum_PYR-GCK          TEASSAMRYFLGATHVALMVWLDRDAGADTDEF-----------------
TH_3143|M.thermoresistible__bu      DTASAALGYPLRGRHLALVLWMTR-SDLPGGEL-----------------
Mb1226c|M.bovis_AF2122/97           ERAEAKLGYPLSRAHTAAIIWSDELDGDHS--------------------
Rv1194c|M.tuberculosis_H37Rv        ERAEAKLGYPLSRAHTAAIIWSDELDGDHS--------------------
MUL_0944|M.ulcerans_Agy99           ERAETRLGYSLIRAHTAAIIWSDDFDGDHS--------------------
MLBr_01052|M.leprae_Br4923          ERAEARLGYRLGLTHTAAVIWSDDLDGDHG--------------------
MMAR_1127|M.marinum_M               QRAEARLGYALNRTHTAAVIWSDEPDGDLN--------------------
MAB_2657c|M.abscessus_ATCC_199      ARAEAQLGYALTGSHIGAVVWVDS-EKEIA--------------------
MSMEG_2971|M.smegmatis_MC2_155      QQALQAIESRFSSELLEMVLSGAARARDVAERLRAFGIDPSSA---LAVY
Mvan_4407|M.vanbaalenii_PYR-1       DGALPEMQLALLAQLIGIDFRRQRVELETELALTDQMVHSLLTGDFQELE
                                      *   :   :        .                              

Mflv_4621|M.gilvum_PYR-GCK          --------IAMERFMQHAVSATGAKQS---------------------VY
TH_3143|M.thermoresistible__bu      --------LRLERFARAVAEAFQLRNTP--------------------LF
Mb1226c|M.bovis_AF2122/97           ---------YLDRAADLFCHAVGSTRP---------------------LT
Rv1194c|M.tuberculosis_H37Rv        ---------YLDRAADLFCHAVGSTRP---------------------LT
MUL_0944|M.ulcerans_Agy99           ---------NLDRAADAFCHAVGSSQD---------------------LT
MLBr_01052|M.leprae_Br4923          ---------YLDQAAEAFSHVVESTQQ---------------------LI
MMAR_1127|M.marinum_M               ---------RLDRVVDAFGRAADFARP---------------------LT
MAB_2657c|M.abscessus_ATCC_199      ---------ALERASEQVMRACGADRR---------------------LT
MSMEG_2971|M.smegmatis_MC2_155      TVVVGDGAVRPPGSTDEIEDFFNRHSIP--------------------AV
Mvan_4407|M.vanbaalenii_PYR-1       RLWSRTALLGMNPAVPRVLVSIGRDRPVDRMLLDRIRREMRSRISGGYST
                                                                                      

Mflv_4621|M.gilvum_PYR-GCK          FSIDRLVGCAWMTV-HRPSDYLSQLRDFVRAQPD-----GPRLSVGEPLP
TH_3143|M.thermoresistible__bu      VAEDTVSGWAWLAINHVVTEPVRTIRELAETADN-----GVHVALGTVDD
Mb1226c|M.bovis_AF2122/97           VVAGAASRWAWVTDAD--GLDIDTVQAAVDNAP------GARIAIGTTAN
Rv1194c|M.tuberculosis_H37Rv        VVAGAASRWAWVTDAD--GLDIDTVQAAVDNAP------GARIAIGTTAN
MUL_0944|M.ulcerans_Agy99           VVANAATRWVWLAEAT--NLDIDTIEQAVDNAS------DARIAIGTKAS
MLBr_01052|M.leprae_Br4923          VVASAATRWVWLADAL--ALDVPEVQKALLNLS------KARVAIGTSSA
MMAR_1127|M.marinum_M               VIAGAATRWVWVANAANATLDVEQVEQAVRDVP------GARIAIGAAAT
MAB_2657c|M.abscessus_ATCC_199      VVAGTVALWLWIPAKT--TPTVAVLMDSLGRRS------GVRVALGRAAT
MSMEG_2971|M.smegmatis_MC2_155      VIPGSQDTVVVFGWHRDMTALVGLAEDLVQTLTARFPADRAVIGVGDLAA
Mvan_4407|M.vanbaalenii_PYR-1       TYGGDVVLLCPVPEVEQEAKLVGQVESIVTACRP----ERLTAGIGPVCR
                                       .       .         :                     .:*    

Mflv_4621|M.gilvum_PYR-GCK          GIEGFRRTYRQAEQARVVAVAADGSSRHRIVAARDPGVALASMLM--TDD
TH_3143|M.thermoresistible__bu      GLEGFRRSHRRARDARKVAAAS--AIPPRITAADDYGISVSALLT--ENL
Mb1226c|M.bovis_AF2122/97           GVEGFRRSHLEALITQRTLSRLR----STQRVAFFADVKMVALIS--QNP
Rv1194c|M.tuberculosis_H37Rv        GVEGFRRSHLEALITQRTLSRLR----STQRVAFFADVKMVALIS--QNP
MUL_0944|M.ulcerans_Agy99           GIEGFRRSHLEALTTQRTLARLK----SDQRVAFFSDVQIVALIT--QNT
MLBr_01052|M.leprae_Br4923          GIEGFRRSHLEALTAQRTLARLK----SHQQVAFFADVQLVSLIT--QNP
MMAR_1127|M.marinum_M               GIEGFRRSHLEALTTQRMVAGLN----SRQRVALFADIQLIALIA--QNP
MAB_2657c|M.abscessus_ATCC_199      GMAGFRRTHMDAAAAQRLLARLG----SPLSVVRYEDVHLMDLLS--ADP
MSMEG_2971|M.smegmatis_MC2_155      DASALREPLIRARETCHVLRRRT----TEPKVGTYADIGTHRMLLGLHDR
Mvan_4407|M.vanbaalenii_PYR-1       KADDYPLGVREALFARQVAAQSR----TGKAVVSSAELGMYRLFAHVGGT
                                               *  :                .     :    ::    . 

Mflv_4621|M.gilvum_PYR-GCK          ATLKEWIHDVLGPLAQNTASD-QRLRDTLRVFLRAGSSFKAAANELQIHA
TH_3143|M.thermoresistible__bu      ADTRRWVLDTLGPLASDTAND-ARLRETLLVFLHVGSSYTAAAERLLLHP
Mb1226c|M.bovis_AF2122/97           DAASEFITSTLGDLESASP----DLQTALLTFINEQCNASRAAKRLHTHR
Rv1194c|M.tuberculosis_H37Rv        DAASEFITSTLGDLESASP----DLQTALLTFINEQCNASRAAKRLHTHR
MUL_0944|M.ulcerans_Agy99           QAANEFITSTLGELESAAP----ELQATLLMFINEQCNASRAAKRLYTHR
MLBr_01052|M.leprae_Br4923          EDAKEFITSTLGDFESASP----ALQQTLLTFINEQCNASRAAKRLFTHR
MMAR_1127|M.marinum_M               EAANDFIKNTLGDFESAGA----ELHKTVLTFVNEQCSIGRTTKVLYTHR
MAB_2657c|M.abscessus_ATCC_199      ASADQFVTDVLGEFQSASP----VLHQTVLTYVEEALNRTSTAERLYTHR
MSMEG_2971|M.smegmatis_MC2_155      SVLRRFADDILGPLDQHDEQYGTALVRTLRTFLANDGHWAKTATELYVHV
Mvan_4407|M.vanbaalenii_PYR-1       DALLGAVLETLGPLLDADGRDGSDLLNTLHAFLEHDRRIAETARALHLHV
                                            . ** : .        *  ::  ::        ::  *  * 

Mflv_4621|M.gilvum_PYR-GCK          NTVKYRVNRALERRGRPIAAERLDVEVALLMCYWLGEVALNPTQALGRS-
TH_3143|M.thermoresistible__bu      NSVRYRVNRAVERRARPIGEDRLEVELALLACRHFQQAVLQPAD------
Mb1226c|M.bovis_AF2122/97           NTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHALSSPGRRSN
Rv1194c|M.tuberculosis_H37Rv        NTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHALSSPGRRSN
MUL_0944|M.ulcerans_Agy99           NTLLRRIEAAQRLLPRPLAHTSVHVAVALEALQWRGDNIAKLPTPTSQDD
MLBr_01052|M.leprae_Br4923          NTLLRRIESAEKLLPRPLDHTSVHIAVALEALQWRGDQTNTSGPRAGRND
MMAR_1127|M.marinum_M               NTLLRRLDRAQQLLPRPLDHSSVHVAVALEALQWRGN-------------
MAB_2657c|M.abscessus_ATCC_199      NTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRAGR------------
MSMEG_2971|M.smegmatis_MC2_155      NTLRNRIARISELTGRDVARLEDRVDLFLALEADALG-------------
Mvan_4407|M.vanbaalenii_PYR-1       NTLRYRVDRIARLLKTDLDDPEKRFFILLALRLRGVVGLGPNDSRQAPSS
                                    *:.  *:    .     .      .   *                     

Mflv_4621|M.gilvum_PYR-GCK          ------
TH_3143|M.thermoresistible__bu      ------
Mb1226c|M.bovis_AF2122/97           SVPA--
Rv1194c|M.tuberculosis_H37Rv        SVPA--
MUL_0944|M.ulcerans_Agy99           EVPA--
MLBr_01052|M.leprae_Br4923          GVPA--
MMAR_1127|M.marinum_M               -PPA--
MAB_2657c|M.abscessus_ATCC_199      ------
MSMEG_2971|M.smegmatis_MC2_155      ------
Mvan_4407|M.vanbaalenii_PYR-1       AGENVQ