For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PWQRPSSRIRELIREGARRALNAGPEWIEELDRETVSANPTIANDPVLAKVVKRVNRANLVHWAAANVRH PGAPVPANLGGEPLRMARDLVRRGLEALTLDIYRIGQYIAWRLWINIAFDLTSDPQELHELLDVSAKSVN EFIEATLAGIAAQVQLEHDELTRGNHADRLEVVGHLLEGAPISRERAETRLGYSLIRAHTAAIIWSDDFD GDHSNLDRAADAFCHAVGSSQDLTVVANAATRWVWLAEATNLDIDTIEQAVDNASDARIAIGTKASGIEG FRRSHLEALTTQRTLARLKSDQRVAFFSDVQIVALITQNTQAANEFITSTLGELESAAPELQATLLMFIN EQCNASRAAKRLYTHRNTLLRRIEAAQRLLPRPLAHTSVHVAVALEALQWRGDNIAKLPTPTSQDDEVPA *
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0944 | - | - | 100% (421) | transcriptional regulatory protein |
M. ulcerans Agy99 | MUL_3245 | - | e-130 | 57.29% (398) | transcriptional regulator |
M. ulcerans Agy99 | MUL_1854 | - | e-107 | 57.58% (330) | transcriptional activator protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1226c | - | 0.0 | 74.82% (421) | hypothetical protein Mb1226c |
M. gilvum PYR-GCK | Mflv_4621 | - | 1e-15 | 25.31% (403) | hypothetical protein Mflv_4621 |
M. tuberculosis H37Rv | Rv1194c | - | 0.0 | 74.82% (421) | hypothetical protein Rv1194c |
M. leprae Br4923 | MLBr_01052 | - | 1e-168 | 69.86% (418) | hypothetical protein MLBr_01052 |
M. abscessus ATCC 19977 | MAB_2657c | - | 4e-73 | 36.23% (403) | hypothetical protein MAB_2657c |
M. marinum M | MMAR_4242 | - | 0.0 | 98.81% (421) | transcriptional regulatory protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0579 | - | 6e-06 | 28.04% (189) | helix-turn-helix, Fis-type |
M. thermoresistible (build 8) | TH_3143 | - | 3e-21 | 24.94% (393) | PUTATIVE putative conserved hypothetical protein |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4621|M.gilvum_PYR-GCK -------------------------MLDSSEVQDTPGHAVHHLFRDLGDL TH_3143|M.thermoresistible__bu -------------------------VVVSGYNADDISSTVALIVDRLLEN MUL_0944|M.ulcerans_Agy99 --------------------------MPWQRPSSRIRELIREGARRALNA MMAR_4242|M.marinum_M --------------------------MPWQRPSSRIRELIREGARRALNA Mb1226c|M.bovis_AF2122/97 --------------------------MAWQQPSPRIRELIREGARIALNP Rv1194c|M.tuberculosis_H37Rv --------------------------MAWQQPSPRIRELIREGARIALNP MLBr_01052|M.leprae_Br4923 --------------------------MARQHPSPRVRELIREGARIALNP MAB_2657c|M.abscessus_ATCC_199 ----------MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLAR MSMEG_0579|M.smegmatis_MC2_155 MVSVSEVVGVRALGLRGVLMGRGDADIRWVATSELPDPTPFLEGGEILLT Mflv_4621|M.gilvum_PYR-GCK V-----------RELPESIHGLLIEQV--AELAADQQLKELLSDTVAANV TH_3143|M.thermoresistible__bu S-----------GEDVERIQRRILADI--DELRSDPRLVELLRSSVAGNV MUL_0944|M.ulcerans_Agy99 G-----------PEWIEELDRETVSAN--PTIANDPVLAKVVKRVNRANL MMAR_4242|M.marinum_M G-----------PEWIEELDRETVSAN--PTIANDPVLAKVVKRANRANL Mb1226c|M.bovis_AF2122/97 S-----------PEWIEELDRATIAAN--PAIANDPVLAKVVQTANRANL Rv1194c|M.tuberculosis_H37Rv S-----------PEWIEELDRATIAAN--PAIANDPVLAKVVQTANRANL MLBr_01052|M.leprae_Br4923 T-----------QEWIDQLDRATFAAN--PAIANDPVLAKVVRRASRAHL MAB_2657c|M.abscessus_ATCC_199 S-----------GEVAGDLTAASLEDPRYRTIADDPVIAEVDARLTVSNL MSMEG_0579|M.smegmatis_MC2_155 TGIETRTWGREWDDYVRRLAGAAVAAVGFGIGLTHERTPTALIAACREHD : : . . : Mflv_4621|M.gilvum_PYR-GCK DTWFSV-VRHSIPFDRMESP------TAALEHARRMAQREVPVNALLRAY TH_3143|M.thermoresistible__bu ETVLTV-IRYGIDLDRVEPP------TAALEYARRAAQHGIALSALIRAY MUL_0944|M.ulcerans_Agy99 VHWAAANVRHPGAPVPANLG------GEPLRMARDLVRRGLEALTLD-IY MMAR_4242|M.marinum_M VHWAAANVRHPGAPVPANLG------GEPLRMARDLVRRGLETLTLD-IY Mb1226c|M.bovis_AF2122/97 VYWAAANLRDPGARVPANLG------TEPLRMARDLVRRGLDTVAFN-IY Rv1194c|M.tuberculosis_H37Rv VYWAAANLRDPGARVPANLG------TEPLRMARDLVRRGLDTVAFN-IY MLBr_01052|M.leprae_Br4923 VHWATANLRDPGAPVPAHLG------PEPLTMARDLVRRGRDVLALD-IY MAB_2657c|M.abscessus_ATCC_199 KHWLTSNISEPGHRVRPATG------SAMRTYARDVVLRGLTTDDIQ-SW MSMEG_0579|M.smegmatis_MC2_155 VNLFEVPRRTTFVAISREVARLLSEQESAATQAALQTQRKLISAATKRHP * . : Mflv_4621|M.gilvum_PYR-GCK RLGHQYGLNLIIAGLRSADLPPEEKLALIEHITRVSFRYIDWMSEQVLET TH_3143|M.thermoresistible__bu RLGQQEMLERILREVRETELDPDLRLSVYERISSTSFAYIDWISQQVSDT MUL_0944|M.ulcerans_Agy99 RIGQYIAWRLWINIAFDLTSDPQELHELLDVSAKSVNEFIEATLAGIAAQ MMAR_4242|M.marinum_M RIGQYIAWRLWINIAFDLTSDPQELRELLDVSAKSVNEFIEATLAGIAAQ Mb1226c|M.bovis_AF2122/97 RTGEHIGWRFWMGIAFELTSDPQELRELLDVSARSVNDFIEATLTGIAAQ Rv1194c|M.tuberculosis_H37Rv RTGEHIGWRFWMGIAFELTSDPQELRELLDVSARSVNDFIEATLTGIAAQ MLBr_01052|M.leprae_Br4923 RVGQYTAWRRWMEIAFTLTSDPQELREILNVSAQSINEYVAATLEAIATH MAB_2657c|M.abscessus_ATCC_199 RAVQRVGWKWWLAACFQVTDDKEQLCELIEVTSNSLTTFVDDSIAELAEH MSMEG_0579|M.smegmatis_MC2_155 ATAVITALAQALDGAACLMSPDGRALTGPVGPRRGEFPFDDAAADVRRLQ : : Mflv_4621|M.gilvum_PYR-GCK YQTERAEWDERRRSLRAQAIRDILNGRD------VDLTEASSAMRYFLGA TH_3143|M.thermoresistible__bu YDTERERWLEHRNNIRAVRVREILDSDEP-----IDIDTASAALGYPLRG MUL_0944|M.ulcerans_Agy99 VQLEHDELTRGNHADRLEVVGHLLEGAP------ISRERAETRLGYSLIR MMAR_4242|M.marinum_M VQLEHDELTRGNHADRLEVVGHLLEGAP------ISRERAETRLGYSLIR Mb1226c|M.bovis_AF2122/97 VQSEHDELTRSTHAERLEVVGLILDGAP------ISPERAEAKLGYPLSR Rv1194c|M.tuberculosis_H37Rv VQSEHDELTRSTHAERLEVVGLILDGAP------ISPERAEAKLGYPLSR MLBr_01052|M.leprae_Br4923 MQLERDELTRSTHAERLEVVDLILEGAP------VTQERAEARLGYRLGL MAB_2657c|M.abscessus_ATCC_199 VRRVREELAGGSQLQRYATVELLLQGAD------IAPARAEAQLGYALTG MSMEG_0579|M.smegmatis_MC2_155 TQAGRSAATQSRPALSLSVQPIGLRGRPAAYLATMGPVRLSDAERDALTT : * . : . * Mflv_4621|M.gilvum_PYR-GCK THVALMVWLDRDAGADTDEFIAMERFMQHAVSATGAKQS-VYFSIDRLVG TH_3143|M.thermoresistible__bu RHLALVLWMTR-SDLPGGELLRLERFARAVAEAFQLRNTPLFVAEDTVSG MUL_0944|M.ulcerans_Agy99 AHTAAIIWSDD----FDGDHSNLDRAADAFCHAVGSSQD-LTVVANAATR MMAR_4242|M.marinum_M AHTAAIIWSDD----FDGDHSNLDRAADAFCHAVGSSQD-LTVVANAATR Mb1226c|M.bovis_AF2122/97 AHTAAIIWSDE----LDGDHSYLDRAADLFCHAVGSTRP-LTVVAGAASR Rv1194c|M.tuberculosis_H37Rv AHTAAIIWSDE----LDGDHSYLDRAADLFCHAVGSTRP-LTVVAGAASR MLBr_01052|M.leprae_Br4923 THTAAVIWSDD----LDGDHGYLDQAAEAFSHVVESTQQ-LIVVASAATR MAB_2657c|M.abscessus_ATCC_199 SHIGAVVWVDS----EK-EIAALERASEQVMRACGADRR-LTVVAGTVAL MSMEG_0579|M.smegmatis_MC2_155 SVAVLGLVDEQRRSRSTTRQHLHSRAIELLAGNDSRTAQLILEVDAPALV : .: : Mflv_4621|M.gilvum_PYR-GCK CAWMTV-HRPSDYLSQLRDFVRAQPD------------------------ TH_3143|M.thermoresistible__bu WAWLAINHVVTEPVRTIRELAETADN------------------------ MUL_0944|M.ulcerans_Agy99 WVWLAEATNLD--IDTIEQAVDNAS------------------------- MMAR_4242|M.marinum_M WVWLAEATNLD--IDTIEQAVDNAS------------------------- Mb1226c|M.bovis_AF2122/97 WAWVTDADGLD--IDTVQAAVDNAP------------------------- Rv1194c|M.tuberculosis_H37Rv WAWVTDADGLD--IDTVQAAVDNAP------------------------- MLBr_01052|M.leprae_Br4923 WVWLADALALD--VPEVQKALLNLS------------------------- MAB_2657c|M.abscessus_ATCC_199 WLWIPAKTTPT--VAVLMDSLGRRS------------------------- MSMEG_0579|M.smegmatis_MC2_155 IPERIRFLRATGGDSEITDAVTALERRGILAGTYADELCTVAVPERAEAA : Mflv_4621|M.gilvum_PYR-GCK GPRLSVGEPLPGIEGFRRTYRQAEQARVVAVAADGSSRHRIVAARDPGVA TH_3143|M.thermoresistible__bu GVHVALGTVDDGLEGFRRSHRRARDARKVAAAS--AIPPRITAADDYGIS MUL_0944|M.ulcerans_Agy99 DARIAIGTKASGIEGFRRSHLEALTTQRTLARLK----SDQRVAFFSDVQ MMAR_4242|M.marinum_M DARIAIGTKASGIEGFRRSHLEALTTQRTLARLK----SDQRVAFFSDVQ Mb1226c|M.bovis_AF2122/97 GARIAIGTTANGVEGFRRSHLEALITQRTLSRLR----STQRVAFFADVK Rv1194c|M.tuberculosis_H37Rv GARIAIGTTANGVEGFRRSHLEALITQRTLSRLR----STQRVAFFADVK MLBr_01052|M.leprae_Br4923 KARVAIGTSSAGIEGFRRSHLEALTAQRTLARLK----SHQQVAFFADVQ MAB_2657c|M.abscessus_ATCC_199 GVRVALGRAATGMAGFRRTHMDAAAAQRLLARLG----SPLSVVRYEDVH MSMEG_0579|M.smegmatis_MC2_155 GESMVDAGLQVGVGAAVPSDDGASGYRTAGLALAQTTPTAALVVWDRVVN : . *: . : * : .. : Mflv_4621|M.gilvum_PYR-GCK LASMLMTDDATLKEWIHDVLGPLAQNTASDQRLRDTLRVFLRAGSSFKAA TH_3143|M.thermoresistible__bu VSALLTENLADTRRWVLDTLGPLASDTANDARLRETLLVFLHVGSSYTAA MUL_0944|M.ulcerans_Agy99 IVALITQNTQAANEFITSTLGELESAAP---ELQATLLMFINEQCNASRA MMAR_4242|M.marinum_M IVALITQNPQAADEFITSTLGELESAAP---ELQATLLMFINEQCNASRA Mb1226c|M.bovis_AF2122/97 MVALISQNPDAASEFITSTLGDLESASP---DLQTALLTFINEQCNASRA Rv1194c|M.tuberculosis_H37Rv MVALISQNPDAASEFITSTLGDLESASP---DLQTALLTFINEQCNASRA MLBr_01052|M.leprae_Br4923 LVSLITQNPEDAKEFITSTLGDFESASP---ALQQTLLTFINEQCNASRA MAB_2657c|M.abscessus_ATCC_199 LMDLLSADPASADQFVTDVLGEFQSASP---VLHQTVLTYVEEALNRTST MSMEG_0579|M.smegmatis_MC2_155 DGPLGLIDPQRAAAFAESWLSGLDSEQL------ETLRCFLRHHGSRLKV : : : . *. : . :: ::. . . Mflv_4621|M.gilvum_PYR-GCK ANELQIHANTVKYRVNRALERRGRPIAAERLDVEVALLMCYWLGEVALNP TH_3143|M.thermoresistible__bu AERLLLHPNSVRYRVNRAVERRARPIGEDRLEVELALLACRHFQQAVLQP MUL_0944|M.ulcerans_Agy99 AKRLYTHRNTLLRRIEAAQRLLPRPLAHTSVHVAVALEALQWRGDNIAKL MMAR_4242|M.marinum_M AKRLYTHRNTLLRRIEAAQRLLPRPLAHTSVHVAVALEALQWRGDNIAKL Mb1226c|M.bovis_AF2122/97 AKRLHTHRNTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHAL Rv1194c|M.tuberculosis_H37Rv AKRLHTHRNTFLRRLESAQRLLPRPLDHTSVHVAVALEALQWRGNKAHAL MLBr_01052|M.leprae_Br4923 AKRLFTHRNTLLRRIESAEKLLPRPLDHTSVHIAVALEALQWRGDQTNTS MAB_2657c|M.abscessus_ATCC_199 AERLYTHRNTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRAGR---- MSMEG_0579|M.smegmatis_MC2_155 AEELGLHRNTVRNRLDAIEALLPGRLDDPQTRVSAWIALQSLPPENRPVS *:.* * *:. *: : : : Mflv_4621|M.gilvum_PYR-GCK TQALGRS----- TH_3143|M.thermoresistible__bu AD---------- MUL_0944|M.ulcerans_Agy99 PTPTSQDDEVPA MMAR_4242|M.marinum_M PTPTSQDDEVPA Mb1226c|M.bovis_AF2122/97 SSPGRRSNSVPA Rv1194c|M.tuberculosis_H37Rv SSPGRRSNSVPA MLBr_01052|M.leprae_Br4923 GPRAGRNDGVPA MAB_2657c|M.abscessus_ATCC_199 ------------ MSMEG_0579|M.smegmatis_MC2_155 P-----------