For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DLFAPPEVTSTLIHTGPGAGSLIEAAAAWQRVAVELENSVSSYASTLSSLIESWDGPSAMAMLQSVQPYL LWLRETAQQSAQLANSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLATNRFGTNTAAIAETENEYQTM WANNSAALSRYQAASSQATSPLTQFNSPLAVTDPGGTANQQAAVMKASVDSSGSSVGSVLNDLNMPGGFD PNAGWFNYFSTWGNQFISSGFPINLLGVWAQLATAQGVASVGGDIGSGLSEGLGATTASLANAIKGIGAG AVAPSGAMGVGVSLGKLTAPPAVVGLLPGTQTGVQLASAASPLPAAESGFPLMPMMVPPPTTSAGTGWRK RKQQKYEDVAYGREVKGKVMPRNPSAG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4274 | - | - | 100% (378) | PPE family protein |
M. avium 104 | MAV_4273 | - | e-100 | 51.85% (378) | PPE family protein |
M. avium 104 | MAV_2914 | - | 8e-47 | 35.03% (394) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1836 | PPE31 | 3e-44 | 32.72% (379) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 2e-24 | 34.59% (185) | PPE protein |
M. tuberculosis H37Rv | Rv1789 | PPE26 | 1e-44 | 33.33% (366) | PPE family protein |
M. leprae Br4923 | MLBr_01182 | - | 1e-32 | 27.59% (424) | PPE-family protein |
M. abscessus ATCC 19977 | MAB_4783 | - | 1e-28 | 30.38% (372) | PPE family protein |
M. marinum M | MMAR_1235 | - | 1e-114 | 57.07% (382) | PPE family protein, PPE14 |
M. smegmatis MC2 155 | MSMEG_0619 | - | 5e-28 | 35.16% (219) | PPE family protein |
M. thermoresistible (build 8) | TH_3113 | - | 1e-29 | 30.25% (400) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_2427 | - | 2e-45 | 34.77% (394) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 4e-27 | 29.70% (367) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment MAV_4274|M.avium_104 -------------MDLFA-PPEVTSTLIHTGPGAGSLIEAAAAWQRVAVE MMAR_1235|M.marinum_M -------------MDFIAMPPEMTSALIHSGPGPESLIEAADAWQRLGAD Mb1836|M.bovis_AF2122/97 -------------MDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAE Rv1789|M.tuberculosis_H37Rv -------------MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAE MUL_2427|M.ulcerans_Agy99 -------------MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIE MLBr_01182|M.leprae_Br4923 ------------MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKE Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE MAB_4783|M.abscessus_ATCC_1997 ----------MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTE TH_3113|M.thermoresistible__bu ----------------MALPPEVHSTLLRTGPGPGALSAAADAWRMLSDE .** * : *.*. .: *. :* :. : MAV_4274|M.avium_104 LENSVSSYASTLSSLIES-WDGPSAMAMLQSVQPYLLWLRETAQQSAQLA MMAR_1235|M.marinum_M LEESVRAHDPVLSALTDV-WRGPSSAAMVGAISPYLTWLRATAQQCQQLA Mb1836|M.bovis_AF2122/97 LRASALSYSSVLSTLTGEEWHGPASASMTAAAAPYVAWMSVTAVRAEQAG Rv1789|M.tuberculosis_H37Rv LSSAATGYETVITQLSSEGWLGPASAAMAEAVAPYVAWMSAAAAQAEQAA MUL_2427|M.ulcerans_Agy99 LASAAEGYRSVISTLSGMYWWGPASAAMLAATGPFIGWLEITGALASETA MLBr_01182|M.leprae_Br4923 LTAAAQGLQSAVEALLTT-FEGESAAALAERVTPYEKWLTQNAASAELTA Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA MAB_4783|M.abscessus_ATCC_1997 YSSAANELTTTLGSVRAGVWDGASAEQYQTAHVPYLSWLHETSAVSAGVA TH_3113|M.thermoresistible__bu YRAAAVELAAVVSQTCATAWEGVGADAYAAAHGPYLFWLTDTAAAAAAAG :. . : : * .: *: *: . . MAV_4274|M.avium_104 NSAEAAATAFGTVRSTVVHPSVVSANRTRLAQLLATNRFGTNTAAIAETE MMAR_1235|M.marinum_M ASAQVAAAAFSSTLATVVHPSEVRANRIALAQLLATNRLGRNLAAIAETE Mb1836|M.bovis_AF2122/97 AQAEAAAAAYEAAFAATVPPPVIEANRAQLMALIATNVLGQNAPAIAATE Rv1789|M.tuberculosis_H37Rv TQARAAAAAFEAAFAATVPPPLIAANRASLMQLISTNVFGQNTSAIAAAE MUL_2427|M.ulcerans_Agy99 NQAAAAAAAYEQAYAMTVPPIVVAANRALLVALVASNIFGQNTAAIEATE MLBr_01182|M.leprae_Br4923 TQLTVAANAYETAFTMTVPPLMVFVNRAQACLLIMSNIFGQNSTAIAEKE Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE MAB_4783|M.abscessus_ATCC_1997 AQTETAATAYSEALATMPTLGELAANHATHGALVATNFFGINTIPIAVNE TH_3113|M.thermoresistible__bu AQLEAAAAAHASALAAMPTMAELTANRTTHAALVATNFFGVNTIPIAVNE . .** *. . : : *: *: :* :* * .* * MAV_4274|M.avium_104 NEYQTMWANNSAALSRYQAASSQATSPLTQFNSPLAVTDP-GGTANQQAA MMAR_1235|M.marinum_M AQYEGMWVNNSAAMYRYEAASVQAVA-LPQFSSPLSTPDL-TGSATRANV Mb1836|M.bovis_AF2122/97 AQYAEMWSQDAMAMYGYAGASAAAT-QLTPFTEPVQTTNA-SGLAAQSAA Rv1789|M.tuberculosis_H37Rv AQYGEMWAQDSAAMYAYAGSSASAS-AVTPFSTPPQIANP-TAQGTQAAA MUL_2427|M.ulcerans_Agy99 AEYAEMWAQDAGAMYDYAATSAMAT-ALVPFSAPGQDTNP-AGLAAQSAA MLBr_01182|M.leprae_Br4923 AEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPPLGVNE-VGLAQEVVE Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVGEAGRAAA Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVGEAGRAAA MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVGEAGSASA MAB_4783|M.abscessus_ATCC_1997 ADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSPDSGAAART-- TH_3113|M.thermoresistible__bu ADYARMWIQAATTMATYEAVASAAVSATPRTVAPPPILGAGTGESATAAI :* ** : : .: * . : . . . MAV_4274|M.avium_104 VMKASVDSSGSSVGSVLNDLNMPGGFDPNAGWFN---------------- MMAR_1235|M.marinum_M AAAAAAPVAAASPLDVLQSLTS---IDPNSGWFG---------------- Mb1836|M.bovis_AF2122/97 IAHATGASAGAQQTTLSQLIAAIPSVLQGLSSSTAATSASGPSGLLGILG Rv1789|M.tuberculosis_H37Rv VATA----AGTAQSTLTEMITGLPNALQSLTSPLLQSSNGPLSWLWQILF MUL_2427|M.ulcerans_Agy99 VSQAAGNAPASAQSVWSQLTSLVPDALPSLSN------------WPNILP MLBr_01182|M.leprae_Br4923 EVVEEVVEEVVEAEQAISQAALDQAVNEGMEATVVPQVDQQVNVDVATPQ Mflv_0325|M.gilvum_PYR-GCK DMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRDPI Mvan_0415|M.vanbaalenii_PYR-1 DVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDPL MSMEG_0619|M.smegmatis_MC2_155 SVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGG-QAILDFLKDPL MAB_4783|M.abscessus_ATCC_1997 -----AAQDATKPPPIVPDPNDPIEMLLKNS-QHFLGMYRALKGLITDPV TH_3113|M.thermoresistible__bu TGAHVTAELRAAESRTLLDEINELIDRLFAP----LFPPGFADALPDGLL MAV_4274|M.avium_104 ----------YFSTWGNQFISSGFPINLLGVW------------------ MMAR_1235|M.marinum_M ----------LANTYANQFVSSGFPVNLLSYL------------------ Mb1836|M.bovis_AF2122/97 SGS--SWLDKLWALLD---PNSNFWNTIASSG------------------ Rv1789|M.tuberculosis_H37Rv GTP--NFPTSISALLTDLQPYASFFYNTEGLP------------------ MUL_2427|M.ulcerans_Agy99 DDF--SMLDGIFAMYA----TVGVTQDVESFC------------------ MLBr_01182|M.leprae_Br4923 TAVPDSSSAAAPQLWGGFAQHLSPINDTLSMI------------------ Mflv_0325|M.gilvum_PYR-GCK GNTFALITDFLTNPVQALITWGPFLLAVVYQA----VSWVGASILYPSLF Mvan_0415|M.vanbaalenii_PYR-1 GNTIKLITDFLTNPAQALITWGPFLAAVAYQA----VSWVGASILYPSLL MSMEG_0619|M.smegmatis_MC2_155 GNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPF MAB_4783|M.abscessus_ATCC_1997 GTIVRIIIDFSTNPAAAIVTWTPLFYVFAYAA-----TFAVMGTPIYAAI TH_3113|M.thermoresistible__bu GTLLAPLLPGATGDGPPMATIMSFLLMGLSNP---AYLFPVLVYLLFTGV MAV_4274|M.avium_104 --AQLATAQG-----------VASVGGDIGSGLSEG---LGATTASLANA MMAR_1235|M.marinum_M --AQNTSAQA-----------LTSVAPDIAEGLSEGESALGESAATLSSA Mb1836|M.bovis_AF2122/97 --LFLPSN-----TIAPFLGLLGGVAAADAAGDVLGEATSGGLGGALVAP Rv1789|M.tuberculosis_H37Rv --YFSIGMGNNFIQSAKTLGLIG--SAAPAAVAAAGDAAKGLPG--LGGM MUL_2427|M.ulcerans_Agy99 --AGIIGAG-------NNLGLLG---AASENSAEVTPGALGLGAMFSSAE MLBr_01182|M.leprae_Br4923 --NNHAGMANAGLSLVNGMGSAMKSLAPTTTKAAESAFKAMGSAVQSTGR Mflv_0325|M.gilvum_PYR-GCK LLPLLATT--LAIVAGVGQHLLSLLNTPPAEEAAEEPAPAQSAPSRPDQQ Mvan_0415|M.vanbaalenii_PYR-1 LLPLVATT--LAIVLGVGAYLLENLPAPAEDAPAEEPAASSPAPTRADQP MSMEG_0619|M.smegmatis_MC2_155 LIPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAP----RTDQP MAB_4783|M.abscessus_ATCC_1997 MGPAAGISIPLAITLAS---LSQMPEAPPVDAPAETVPARIDQPHAVAMG TH_3113|M.thermoresistible__bu VHTTVAVSGMLAQLVPLMPALLPVAVAALGGLAGVWAGLSGLAGLAGLTA MAV_4274|M.avium_104 IKGIGAGAVAPSGAMGVGVSLGKLTAPPAVVGLLPGTQTGVQLASAASPL MMAR_1235|M.marinum_M VEGVGA-AAAPTAALGVGMPIGNLTAPPAAAGLLPAAQTPVQLASVASPL Mb1836|M.bovis_AF2122/97 LGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAAPLASPLGSALG----- Rv1789|M.tuberculosis_H37Rv LG-----GGPVAAGLGNAASVGKLSVPPVWSGPLPGSVTPGAAPL----- MUL_2427|M.ulcerans_Agy99 RSAVGGATNAVTVSMSRAGSIGQLSVPPSWAAPSSGSASALSVSG----- MLBr_01182|M.leprae_Br4923 GLLGSSSGGHVTAQLGRAASIGSLRVPQTWTTASQPVTAATRALSPARVA Mflv_0325|M.gilvum_PYR-GCK SFPATMSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATFVPYVVAGRDP Mvan_0415|M.vanbaalenii_PYR-1 SPAIAVSAPPPPSSAAATVGTVATGTAPAPGAPAAATASFVPYAVAGRDP MSMEG_0619|M.smegmatis_MC2_155 -LAVGISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATFVPYAVANRDP MAB_4783|M.abscessus_ATCC_1997 GAPAPTASTAAP--TPTTTSPATPGSAPAP-TPPPAGAEGLGYAVRGDGP TH_3113|M.thermoresistible__bu VPAADGGASAAPVPAGGPSLPSGSSAPPAPTGSAAPTTGTAPGGAGSPPP . MAV_4274|M.avium_104 PAAESGFPLMPMMVPPPTTSAGTGWRKRKQQKYEDVAYGREVKGKVMPRN MMAR_1235|M.marinum_M GTAESGFPMLPPLMPPP-ISAGSGWRKRKQQKYEDLEYGLELKGTFMPRP Mb1836|M.bovis_AF2122/97 GTPMVAP---PPAVAAG--MPGMPFGTMGGQGFGRAVPQYGFRPNFVARP Rv1789|M.tuberculosis_H37Rv PVSTVSA---APEAAPGSLLGGLPLAGAGGAGAG---PRYGFRPTVMARP MUL_2427|M.ulcerans_Agy99 LTTIPGT---EVAEQGAPGMPGMPVG--TGKRATSVILRYGVRLTVMARP MLBr_01182|M.leprae_Br4923 VATESES---APLLGGGLPMAPMVPGGGSGTGGVNTALRLQPRAFVMPRN Mflv_0325|M.gilvum_PYR-GCK YEGFSPTVRDSTGAKAPAGTIPAAASGIAASAAERRKRRRRQKEEIKGRG Mvan_0415|M.vanbaalenii_PYR-1 GTGFSPTVRDSTSAKAPASGIPAAASGVAASAAERRKRRRRQKDEIAGRA MSMEG_0619|M.smegmatis_MC2_155 GEGFTPTLGNKSQVAAPASGVPAAASGVAASLASRRKRRRKKGAQIEERG MAB_4783|M.abscessus_ATCC_1997 GFGFGPTIGASTGATAHAPSSAVSAAAALACNPATGKSRRRRRRTIDDRG TH_3113|M.thermoresistible__bu AGHSVPPAPHSAPPVGTSGPPYLIAAQPAPGVARRSAGARRAASIVEPAG . MAV_4274|M.avium_104 PSAG---------------------------------------------- MMAR_1235|M.marinum_M PSAG---------------------------------------------- Mb1836|M.bovis_AF2122/97 PAAG---------------------------------------------- Rv1789|M.tuberculosis_H37Rv PFAG---------------------------------------------- MUL_2427|M.ulcerans_Agy99 PAAG---------------------------------------------- MLBr_01182|M.leprae_Br4923 PAAG---------------------------------------------- Mflv_0325|M.gilvum_PYR-GCK YADAYADYEELPDDGPPEQPAPRVTASTRGAGPMGFAGTVSRG-DEQAGG Mvan_0415|M.vanbaalenii_PYR-1 YADAYADYEPEPDDEPPVRQEPRIAATERGAGPMGFAGTVSRD-AAQAGG MSMEG_0619|M.smegmatis_MC2_155 YADAYMDYEE-PDEDPAPQPEPRVRASERGSDAMGFTGTVTRH-DVTAAG MAB_4783|M.abscessus_ATCC_1997 YRHEYATMDDHTPTGP--QDPVTAVASGTGAGRLGFAGVHTATTAVEATG TH_3113|M.thermoresistible__bu SAAAAAAARESAPIRRRRGQKDGLHGHRHEHQQPASMSAATAP---SAAG MAV_4274|M.avium_104 ----------------------------------------------- MMAR_1235|M.marinum_M ----------------------------------------------- Mb1836|M.bovis_AF2122/97 ----------------------------------------------- Rv1789|M.tuberculosis_H37Rv ----------------------------------------------- MUL_2427|M.ulcerans_Agy99 ----------------------------------------------- MLBr_01182|M.leprae_Br4923 ----------------------------------------------- Mflv_0325|M.gilvum_PYR-GCK LTTLAGDSFGGGPREPMLPGTWDPDATDDRHTDGRDGHDGHDGKEKP Mvan_0415|M.vanbaalenii_PYR-1 LTTLPGDPFGGGPKAPMLPGTWDPDTEPD------ERHNHHDGKDSQ MSMEG_0619|M.smegmatis_MC2_155 LTTLTGDTFDDRPVTPMLPGTWDGDENPAP------SPDDPEGGPRR MAB_4783|M.abscessus_ATCC_1997 LSTLDGDAEN--RTIPMLPGTWDVTDDDR------------------ TH_3113|M.thermoresistible__bu IRVLGGAGRISRTRGSVPHAEITPGDPTEPSSPTDRAHRPAEPN---