For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_1952 (-)

annotation: transcriptional regulator
coordinates: 1941376 - 1941906
length: 176

DAALNLFSANGYDQTTTDEIAEAAGVSPRTFFRYFPTKESVLFFGEYDFIHAFSAVYLGRDESLSDYEAM
SEAFAVLAPSLKRIRKRIAQYHEAVASSLVLLGRERRNHEANRETVAKVIAERRGLPAPDGECWLLASIG
MLLVERALNQWLSTTDRGLDDIIRQEFAALPGVVK*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_1952--100% (176)transcriptional regulator
M. avium 104MAV_2657-3e-7778.98% (176) transcriptional regulator
M. avium 104MAV_0474-2e-1529.48% (173) TetR-family protein transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3860c-6e-0928.57% (175) transcriptional regulatory protein TetR-family
M. gilvum PYR-GCKMflv_0350-1e-1338.06% (134) TetR family transcriptional regulator
M. tuberculosis H37RvRv3830c-6e-0928.57% (175) transcriptional regulatory protein TetR-family
M. leprae Br4923MLBr_02568-4e-0542.86% (42) putative TetR-family transcriptional regulator
M. abscessus ATCC 19977MAB_3837-5e-0924.72% (178) transcriptional regulatory protein TetR
M. marinum MMMAR_3861-2e-1030.07% (153) putative regulatory protein
M. smegmatis MC2 155MSMEG_1420-5e-0924.86% (177) transcriptional regulatory protein
M. thermoresistible (build 8)TH_3524-1e-1346.91% (81) PUTATIVE -
M. ulcerans Agy99MUL_2933-3e-1033.58% (134) TetR family transcriptional regulator
M. vanbaalenii PYR-1Mvan_1927-1e-1429.89% (174) TetR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mb3860c|M.bovis_AF2122/97           ---------MVRPP--QTARSERTREALRQAALVRFLAQGVEATSAEQIA
Rv3830c|M.tuberculosis_H37Rv        ---------MVRPP--QTARSERTREALRQAALVRFLAQGVEATSAEQIA
MUL_2933|M.ulcerans_Agy99           ---------MTVPTNRHELRRRSTHEALRRAALKSFARKGFAQVTVTELA
MAB_3837|M.abscessus_ATCC_1997      ---------MNAQPARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIA
MSMEG_1420|M.smegmatis_MC2_155      ----------MSEGSRAGRRRSTTQDHIAGVAIDLFAARGFDAVSVDDVA
TH_3524|M.thermoresistible__bu      ------------------VRGHRNREALIAAAIDLFTVNGYEQTTVEQIA
Mvan_1927|M.vanbaalenii_PYR-1       ----MSAAVIPGYDRRMSRWQPNARERLEQAALELYTRQGFDQTTVDDIA
MAV_1952|M.avium_104                ----------------------------MDAALNLFSANGYDQTTTDEIA
MMAR_3861|M.marinum_M               MASEGDGMNPANIGSLRDRRRAELFSLIQQTAHRLFAERGFDAVTTEDIA
Mflv_0350|M.gilvum_PYR-GCK          -----MEGMNPEQPGLRERKKTRTRETVRREAFRLFELNGYAQTTVDQIA
MLBr_02568|M.leprae_Br4923          -----------MAGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIA
                                                                   *   :  .*   .:   :*

Mb3860c|M.bovis_AF2122/97           EDAGVSLRTFYRHFRSKHDLLFADYDAGLHWFRAALDARPADESIIDSVQ
Rv3830c|M.tuberculosis_H37Rv        EDAGVSLRTFYRHFRSKHDLLFADYDAGLHWFRAALDARPADESIIDSVQ
MUL_2933|M.ulcerans_Agy99           REAGVTERTFFRHFPTKEAVLFQDYENQLEWLARALAQRPVSEPLFDAVL
MAB_3837|M.abscessus_ATCC_1997      AAAGIARRTVFRYYSSKNAIVWGDFDSHLGVMRALLDETADTVDTSTALR
MSMEG_1420|M.smegmatis_MC2_155      AAAGISRRTLFRYYASKSAIPWGDFDSHLQHLQNLLRTLSSEVSLGDALR
TH_3524|M.thermoresistible__bu      EAAGVAPRTFFRHFAAKEDILFHGYADRLAEATRRFRAARSGS-LWKALA
Mvan_1927|M.vanbaalenii_PYR-1       QRAGLTERTFFRHFADKREVLFSGQAALIDLVTASVAAQEDTDPPLDVVA
MAV_1952|M.avium_104                EAAGVSPRTFFRYFPTKESVLFFGEYDFIHAFSAVYLGRDESLSDYEAMS
MMAR_3861|M.marinum_M               AAAGVSISTYFRHAPTKEGLLVDPVRQAITEIVSSYRSWPADESAVEALI
Mflv_0350|M.gilvum_PYR-GCK          EAAFVSPRTFFRYFPTKESVLFS--DDLFNPIIEEFLAAPAELSPVAAYR
MLBr_02568|M.leprae_Br4923          AEAQISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADIDFTQSPKDLL
                                      * ::    : :   *  :        :                     

Mb3860c|M.bovis_AF2122/97           AAIF-SFP-YDVDAVTKIASLRRGELEPSRIVRHMREVEADFADAIQAQL
Rv3830c|M.tuberculosis_H37Rv        AAIF-SFP-YDVDAVTKIASLRRGELEPSRIVRHMREVEADFADAIQAQL
MUL_2933|M.ulcerans_Agy99           ASVA-AFP-HDLEVVRQAATARSELISADRIANHLRVVQSSFAQVLTAFV
MAB_3837|M.abscessus_ATCC_1997      QAVL-TFNDFPVDETPRHRMRMRMILEVPALQAYSMLMYTGWRDVIAQFV
MSMEG_1420|M.smegmatis_MC2_155      EALL-TFNTYADHEMAEHRQRMRVILETEELQAYSMTMYAGWRTVIAEYV
TH_3524|M.thermoresistible__bu      EASE-AVATAIAENPGIFLVRARMYGELPALRATMLRINDDWIDQMTTEV
Mvan_1927|M.vanbaalenii_PYR-1       AALT-AAGSALDGRGDRARQRQAVIDANPGLRERELIKLATLADTLAEAL
MAV_1952|M.avium_104                EAFA-VLAPSLKRIRKRIAQYHEAVASSLVLLGRERRNHEANRETVAKVI
MMAR_3861|M.marinum_M               ALFV-SYARDAGD--LKLDTWRRAIATAPYLLSKSALVSEDDQHRFIEHV
Mflv_0350|M.gilvum_PYR-GCK          HAAARVFETMAGSDYDYIIARQRLLYDLPEAKGALWNEHVGAIRRLTSAI
MLBr_02568|M.leprae_Br4923          RNTIVSFLRYIDANRASWIVMYIQAMSLPAFAQTVREARDQITELVAGLM
                                                                                 .   :

Mb3860c|M.bovis_AF2122/97           RRRNCDIAGAPDARLHIAVTARCVAAAVFGAMEAWMLGSDRSLGELARVC
Rv3830c|M.tuberculosis_H37Rv        RRRNCDIAGAPDARLHIAVTARCVAAAVFGAMEAWMLGSDRSLGELARVC
MUL_2933|M.ulcerans_Agy99           RNRYADVA---NVDLVAEVAGATIAAALVVAVENWGRYG--CAEDLGELV
MAB_3837|M.abscessus_ATCC_1997      ARRSGTDP----GSLLPQTVAWTLLGVALAAYEQWLADE---SSKLTTLL
MSMEG_1420|M.smegmatis_MC2_155      ADRLGMST----TDLMPQTVAWLMLGVALSAYENWLADE---SVSLRGAI
TH_3524|M.thermoresistible__bu      ARWLGSDA---AVDVRPRLAATVINGANRTAIDLWVSAD--GKGDLVELM
Mvan_1927|M.vanbaalenii_PYR-1       RQRGVEAP-------AARLAAEVGLAVFRVAFERWVQSP--GGAPLPTLI
MAV_1952|M.avium_104                AERRGLPAP----DGECWLLASIGMLLVERALNQWLSTT---DRGLDDII
MMAR_3861|M.marinum_M               ASRMGVDAR---TDIRPALLVHTSLATVKFVFDRWLSTDPPSSPIFHVQM
Mflv_0350|M.gilvum_PYR-GCK          AKRLGRPED----DYQARVTAGAIIGVFMAASDDEPMSG--------EAF
MLBr_02568|M.leprae_Br4923          RVGTRSSRP----DHEYEIMAGALVGAGEAMATRLTTGDIAVDEAAELMI
                                                                                      

Mb3860c|M.bovis_AF2122/97           HVALESLRVGISDTWTTLTVSS---------
Rv3830c|M.tuberculosis_H37Rv        HVALESLRVGISDTWTTLTVSS---------
MUL_2933|M.ulcerans_Agy99           AASLDLVRSGLAPLS----------------
MAB_3837|M.abscessus_ATCC_1997      GKGFDAAEVGLRALR----------------
MSMEG_1420|M.smegmatis_MC2_155      AAAFEVARPGLDALQPAH-------------
TH_3524|M.thermoresistible__bu      ADAVRLVRPTLDRIERESRTVANPVRRRDVV
Mvan_1927|M.vanbaalenii_PYR-1       AAAFADLRRIVA-------------------
MAV_1952|M.avium_104                RQEFAALPGVVK-------------------
MMAR_3861|M.marinum_M               DQALRIALAGFR-------------------
Mflv_0350|M.gilvum_PYR-GCK          LEALDLLDQALPR------------------
MLBr_02568|M.leprae_Br4923          NLFWHGLKGAPADRDFGPSIVAG--------