For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ASEGDGMNPANIGSLRDRRRAELFSLIQQTAHRLFAERGFDAVTTEDIAAAAGVSISTYFRHAPTKEGLL VDPVRQAITEIVSSYRSWPADESAVEALIALFVSYARDAGDLKLDTWRRAIATAPYLLSKSALVSEDDQH RFIEHVASRMGVDARTDIRPALLVHTSLATVKFVFDRWLSTDPPSSPIFHVQMDQALRIALAGFR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3861 | - | - | 100% (206) | putative regulatory protein |
M. marinum M | MMAR_4840 | - | 9e-67 | 63.37% (202) | putative regulatory protein |
M. marinum M | MMAR_3853 | - | 2e-09 | 38.78% (98) | putative regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2534 | - | 9e-10 | 38.24% (102) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2551 | - | 6e-11 | 37.27% (110) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv2506 | - | 9e-10 | 38.24% (102) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00815 | - | 4e-06 | 23.86% (176) | putative TetR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0248c | - | 8e-10 | 28.40% (169) | TetR family transcriptional regulator |
M. avium 104 | MAV_2391 | - | 1e-69 | 67.84% (199) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_1420 | - | 2e-10 | 28.98% (176) | transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_3524 | - | 2e-10 | 28.40% (162) | PUTATIVE - |
M. ulcerans Agy99 | MUL_3793 | - | 1e-104 | 98.45% (193) | putative regulatory protein |
M. vanbaalenii PYR-1 | Mvan_0989 | - | 2e-10 | 31.90% (116) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb2534|M.bovis_AF2122/97 ------------MTASAPDGRPGQPEATNRRSQ--LKSDRRFQLLAAAER Rv2506|M.tuberculosis_H37Rv ------------MTASAPDGRPGQPEATNRRSQ--LKSDRRFQLLAAAER Mflv_2551|M.gilvum_PYR-GCK ---------------MAP------TEISSPRSR--AKSDRRDQLVAAAER MMAR_3861|M.marinum_M --------------MASEGDGMNPANIGSLRDR--RRAELFSLIQQTAHR MUL_3793|M.ulcerans_Agy99 --------------MASEGDGMSPANIGSLRDR--RRAELFSLIQQTAHR MAV_2391|M.avium_104 ---------------------MPSANSSSLRDR--RRAELLSQIQQTAHQ MSMEG_1420|M.smegmatis_MC2_155 ------------------------MSEGSRAGR--RRSTTQDHIAGVAID TH_3524|M.thermoresistible__bu -----------------------------VRGH--RNRE---ALIAAAID Mvan_0989|M.vanbaalenii_PYR-1 -----------------------MTATPSLHEQ--RRRSTREALRRAALA MAB_0248c|M.abscessus_ATCC_199 -----------------------MRPASGLREQ--KKSETKLALSRAALE MLBr_00815|M.leprae_Br4923 MNNLAKAAQRRTVRPIDRGRLSDDIATPNQRSNRLSRDKRRGQLLIVASD . . : .* Mb2534|M.bovis_AF2122/97 LFAERG-FLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL Rv2506|M.tuberculosis_H37Rv LFAERG-FLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL Mflv_2551|M.gilvum_PYR-GCK LFAEHG-YLAVRLEDIGSAAGISGPAVYRHFPNKEALLVELLVGISTRLL MMAR_3861|M.marinum_M LFAERG-FDAVTTEDIAAAAGVSISTYFRHAPTKEGLLVDPVRQAITEIV MUL_3793|M.ulcerans_Agy99 LFAERG-FDAVTTEDIAAAAGVSISTYFRHAPTKEGLLVDPVRQAITEIV MAV_2391|M.avium_104 LFAERG-FEAVTTEDIAAAAGISISTYFRYAPTKEGLLVDPAREVAATIV MSMEG_1420|M.smegmatis_MC2_155 LFAARG-FDAVSVDDVAAAAGISRRTLFRYYASKSAIPWGDFDSHLQHLQ TH_3524|M.thermoresistible__bu LFTVNG-YEQTTVEQIAEAAGVAPRTFFRHFAAKEDILFHGYADRLAEAT Mvan_0989|M.vanbaalenii_PYR-1 SFAARG-FANVTVTELARAAGVTERTFFRHFPTKEAVLFQDYETQVEWLA MAB_0248c|M.abscessus_ATCC_199 LALDRGDLAAVTVDDIADAVRVSARTFRNYFTSKEDAVLFSLRGIEDNAV MLBr_00815|M.leprae_Br4923 VFVDHG-YHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLERHMNNLV .* . ::. . :: . .: . * Mb2534|M.bovis_AF2122/97 AGARDVTTRSANLAAALDGLIEFHLDFALGEADL--IRIQDRDLAHLPAV Rv2506|M.tuberculosis_H37Rv AGARDVTTRSANLAAALDGLIEFHLDFALGEADL--IRIQDRDLAHLPAV Mflv_2551|M.gilvum_PYR-GCK AGATDVVGADDDAASTLENLIDFHLDFALDESDL--IRIQDRDLGNLPPA MMAR_3861|M.marinum_M SSYRSWPADES----AVEALIALFVSYARDAGDL-KLDTWRRAIATAPYL MUL_3793|M.ulcerans_Agy99 SSYRSWPADES----AVEASIALFVSYARDAGDL-KLDTLRRAIATAPYL MAV_2391|M.avium_104 GAYRTRPAHES----AVEALIQLFVTHAKEVGAAGDFDTWRHAVATAPHL MSMEG_1420|M.smegmatis_MC2_155 NLLRTLSSEVSLGDALREALLTFNTYADHEMAEH---RQRMRVILETEEL TH_3524|M.thermoresistible__bu RRFR-AARSGSLWKALAEASEAVATAIAENPGIF---LVRARMYGELPAL Mvan_0989|M.vanbaalenii_PYR-1 AALARRPGSES----VFDAVRAAIAEFPYDLEVVRQAATARSELISAERI MAB_0248c|M.abscessus_ATCC_199 ALLRQRPQHEH----VVDSLEAVMLDLATSEAFS-TTVAVTRLSAQNPGL MLBr_00815|M.leprae_Br4923 SSVQQALRTTTNNRQRLHAAVQAFFDFIEHDGQG-YRLIFENDNITEPRV . Mb2534|M.bovis_AF2122/97 AERQVRKAQRQYVEVWVGVLRELNP-GLAEADARLMAHAVFGLLNSTPHS Rv2506|M.tuberculosis_H37Rv AERQVRKAQRQYVEVWVGVLRELNP-GLAEADARLMAHAVFGLLNSTPHS Mflv_2551|M.gilvum_PYR-GCK AKRQVRRKQRQYVEIWVDVLRRCTP-GLSEADARLMAHGTFGLLNSTAHS MMAR_3861|M.marinum_M LSKSALVSEDDQHRFIEHVASRMGVDARTDIRPALLVHTSLATVKFVFDR MUL_3793|M.ulcerans_Agy99 LSKSALVSEDDQHRFIEHVASRMGVDARTDIRPALLVHTSLATVKFVFDR MAV_2391|M.avium_104 LRKSVLMSETDHSNLIQQVAARMNVTAALDIRPALLVHTSLATVQFVLDG MSMEG_1420|M.smegmatis_MC2_155 QAYSMTMYAGWRTVIAEYVADRLGM-STTDLMPQTVAWLMLGVALSAYEN TH_3524|M.thermoresistible__bu RATMLRINDDWIDQMTTEVARWLGSDAAVDVRPRLAATVINGANRTAIDL Mvan_0989|M.vanbaalenii_PYR-1 AGHLRVVQSSFADVLTGHIRTRYAGTADIDLVADVAGAALAAALVVAVEH MAB_0248c|M.abscessus_ATCC_199 AAHDAARSEDVGTVVLTEVSRRAGLDPDVDLYPRLVCNAAYAVLATVIQL MLBr_00815|M.leprae_Br4923 AAQVRVATESCIDAVFALIS---ADSRLDPHRARMVAVGLVGISVDCARY . : . . Mb2534|M.bovis_AF2122/97 MKAADSKPARTVRARAVLR------------------------------- Rv2506|M.tuberculosis_H37Rv MKAADSKPARTVRARAVLR------------------------------- Mflv_2551|M.gilvum_PYR-GCK MKPGTTKTAEAG-SRTVLR------------------------------- MMAR_3861|M.marinum_M WLSTDPPSSPIFHVQMDQ-------------------------------- MUL_3793|M.ulcerans_Agy99 WLSTDPPSSPIFHVQWTRRCGSRSPDSGNAIRHLPSSRETEPNFVVRHDI MAV_2391|M.avium_104 WLSSDSDESRPFHEQLEE-------------------------------- MSMEG_1420|M.smegmatis_MC2_155 WLADESVSLRGAIAAAFE-------------------------------- TH_3524|M.thermoresistible__bu WVSADGKGDLVELMADAVR------------------------------- Mvan_0989|M.vanbaalenii_PYR-1 WGRNGCVDDLGEITSASMA------------------------------- MAB_0248c|M.abscessus_ATCC_199 AVSGSKLSKDPG-------------------------------------- MLBr_00815|M.leprae_Br4923 WLDTNRPISKSDAVEGTVQ------------------------------- Mb2534|M.bovis_AF2122/97 -----------AMTVAALSAADRCL------------- Rv2506|M.tuberculosis_H37Rv -----------AMTVAALSAADRCL------------- Mflv_2551|M.gilvum_PYR-GCK -----------EMTVAALTSAERRRG------------ MMAR_3861|M.marinum_M ---------ALRIALAGFR------------------- MUL_3793|M.ulcerans_Agy99 WVRPSGSGSNPRASACSFERMRPCIHHRRHHCTR---- MAV_2391|M.avium_104 ---------ALRITLAGFDRPSDATPGRR--------- MSMEG_1420|M.smegmatis_MC2_155 ------------VARPGLDALQPAH------------- TH_3524|M.thermoresistible__bu ------------LVRPTLDRIERESRTVANPVRRRDVV Mvan_0989|M.vanbaalenii_PYR-1 ------------VLRSGFARLT---------------- MAB_0248c|M.abscessus_ATCC_199 -----------ALVAQGFQRLRDGLA------------ MLBr_00815|M.leprae_Br4923 ------------FAWGGLSHVPLTRL------------ :