For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTFDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGPSAAAMVTA VQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAALIASNVLGQNAAAIAATEA QYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLGAQAAAVSGATATSAQTSGLQGTVANVPN VVRTLAAPADPPGLSALDNLLGNPVVNNVGNAGFNVVSWNVFNTIVSNILYNHTLDTAAAAGVAGEVGGA VGGGALVGAAAPATAGVGAAPVLASMGSAATVGELSTPATWSAPTPEPAATTVGATEWASPAEEPHTAWA TGMPAVASAGRGGYGMGPRYGVKPKVMPTRLPV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1347 | - | - | 100% (383) | PPE family protein |
M. avium 104 | MAV_4015 | - | 4e-72 | 44.24% (382) | PPE family protein |
M. avium 104 | MAV_2914 | - | 2e-71 | 42.67% (382) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2790c | PPE43 | 7e-97 | 50.89% (395) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 8e-32 | 31.01% (387) | PPE protein |
M. tuberculosis H37Rv | Rv2768c | PPE43 | 6e-97 | 50.89% (395) | PPE family protein |
M. leprae Br4923 | MLBr_01182 | - | 3e-46 | 35.00% (420) | PPE-family protein |
M. abscessus ATCC 19977 | MAB_4783 | - | 3e-32 | 29.50% (383) | PPE family protein |
M. marinum M | MMAR_1950 | - | 1e-101 | 52.79% (394) | PPE family protein, PPE15_1 |
M. smegmatis MC2 155 | MSMEG_0619 | - | 7e-35 | 29.70% (404) | PPE family protein |
M. thermoresistible (build 8) | TH_3113 | - | 2e-32 | 30.92% (414) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_4621 | - | 3e-95 | 49.23% (392) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 2e-36 | 32.15% (395) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2790c|M.bovis_AF2122/97 -------------MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVE Rv2768c|M.tuberculosis_H37Rv -------------MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVE MMAR_1950|M.marinum_M -------------MDFGALPPEINSTRMYAGAGATPMMAAAAAWNRLAVE MUL_4621|M.ulcerans_Agy99 -------------MDFGALPPEINSARMYAGAGAGPMMAASAAWNGLAVE MAV_1347|M.avium_104 -----------MTFDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADE MLBr_01182|M.leprae_Br4923 ------------MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKE Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE MAB_4783|M.abscessus_ATCC_1997 ----------MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTE TH_3113|M.thermoresistible__bu ----------------MALPPEVHSTLLRTGPGPGALSAAADAWRMLSDE * .** :*: : *.*. .: :*. :: *: * Mb2790c|M.bovis_AF2122/97 LSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLAWLTYTAESAAHAA Rv2768c|M.tuberculosis_H37Rv LSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLAWLTYTAESAAHAA MMAR_1950|M.marinum_M LGTTAASFESVVTQLTTEQWMGPASTSMAVAVQPYLAWLTYTAESAAHAG MUL_4621|M.ulcerans_Agy99 LGTTAASYESVITRLTTESWMGPASMAMIAAAQPYLAWLTYTSEAAMHAG MAV_1347|M.avium_104 LSTTAAATQSAIANLTGEEWMGPSAAAMVTAVQPYVQWMHTTAGQLQQAA MLBr_01182|M.leprae_Br4923 LTAAAQGLQSAVEALLTT-FEGESAAALAERVTPYEKWLTQNAASAELTA Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA MAB_4783|M.abscessus_ATCC_1997 YSSAANELTTTLGSVRAGVWDGASAEQYQTAHVPYLSWLHETSAVSAGVA TH_3113|M.thermoresistible__bu YRAAAVELAAVVSQTCATAWEGVGADAYAAAHGPYLFWLTDTAAAAAAAG ::* : : : * .: ** *: : .. Mb2790c|M.bovis_AF2122/97 AQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIMATE Rv2768c|M.tuberculosis_H37Rv AQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIMATE MMAR_1950|M.marinum_M AQATASAAAFEAAFAATVPPAAVAANRAQLAMLVSTNILGQNTPAIAATE MUL_4621|M.ulcerans_Agy99 AQAAASAAAYEAAFAMTVPPPVVAANRSLLAALVATNFLGINTPAIMATE MAV_1347|M.avium_104 AQAMASAAAYETAFAMTVPPALVAANRAQLAALIASNVLGQNAAAIAATE MLBr_01182|M.leprae_Br4923 TQLTVAANAYETAFTMTVPPLMVFVNRAQACLLIMSNIFGQNSTAIAEKE Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE MAB_4783|M.abscessus_ATCC_1997 AQTETAATAYSEALATMPTLGELAANHATHGALVATNFFGINTIPIAVNE TH_3113|M.thermoresistible__bu AQLEAAAAAHASALAAMPTMAELTANRTTHAALVATNFFGVNTIPIAVNE .* .:* *. *:: . : *:: *: :*.:* *: .* .* Mb2790c|M.bovis_AF2122/97 AHYGEMWAQDALAMYGYAASSAAAG-RLNPLITPSQTANMAGLA------ Rv2768c|M.tuberculosis_H37Rv AHYGEMWAQDALAMYGYAASSAAAG-RLNPLITPSQTANMAGLA------ MMAR_1950|M.marinum_M AQYGEMWAQDALAMYGYAASSAAAG-TLNPLTTPAQIANPAGLA------ MUL_4621|M.ulcerans_Agy99 ALYAEMWAQDAGAMYGYAAASSTSG-SLQPLSTPQQTTNPGGLA------ MAV_1347|M.avium_104 AQYGEMWAQDAAAMYGYAASSATAG-KLSPLTSPAPTNQPGGLG------ MLBr_01182|M.leprae_Br4923 AEYTEMWIQDAAAMTSYQASVLEAVGATKAFTAPPLGVNEVGLAQEVVEE Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAAL-AATPTSAPAPSVLLPGVG----EA Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAAL-AATPTATPAPFVLAPGVG----EA MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAV-AAAPVSAPAPFLLKPGVG----EA MAB_4783|M.abscessus_ATCC_1997 ADYIRMWIQAATVMSTYQAVSESSV-SAAPPTSPAPPVLSPDSG----AA TH_3113|M.thermoresistible__bu ADYARMWIQAATTMATYEAVASAAV-SATPRTVAPPPILGAGTG----ES * * .** * * .* * : : . . . . Mb2790c|M.bovis_AF2122/97 ----------GQAAAVSHAAAASTVQQVGLGSLISNLP------------ Rv2768c|M.tuberculosis_H37Rv ----------GQAAAVSHAAAASTVQQVGLGSLISNLP------------ MMAR_1950|M.marinum_M ----------SQAAAVSQAAAATTVEQVGLGNLITNVP------------ MUL_4621|M.ulcerans_Agy99 ----------AQSAAVSQAAAS-AAATDGTTSLLSNLP------------ MAV_1347|M.avium_104 ----------AQAAAVSGATAT-SAQTSGLQGTVANVP------------ MLBr_01182|M.leprae_Br4923 VVEEVVEEVVEAEQAISQAALDQAVNEGMEATVVPQVD------------ Mflv_0325|M.gilvum_PYR-GCK GRAAADMSAFAAQPMAAQAGAAFD-VSNIIADIIRLYG----------EV Mvan_0415|M.vanbaalenii_PYR-1 GRAAADVTAFAAQAQAAEAGSALD-LSNIIADLIRAYG----------EL MSMEG_0619|M.smegmatis_MC2_155 GSASASVQQMSAQATAAESGSSLD-LSSIISDLLNQYL----------QG MAB_4783|M.abscessus_ATCC_1997 ART-------AAQDATKPPPIVPD-PNDPIEMLLKNS-----------QH TH_3113|M.thermoresistible__bu ATAAITGAHVTAELRAAESRTLLDEINELIDRLFAPLFPPGFADALPDGL . . Mb2790c|M.bovis_AF2122/97 --------------------NAVMGFASPLTSAADAAGLGGIIQDIEELL Rv2768c|M.tuberculosis_H37Rv --------------------NAVMGFASPLTSAADAAGLGGIIQDIEELL MMAR_1950|M.marinum_M --------------------GAVMGLASPAASLVDATGLSTLVQDISSVL MUL_4621|M.ulcerans_Agy99 --------------------NTIMGLASPITSAIDATGLGGIIQDIEDFL MAV_1347|M.avium_104 --------------------NVVRTLAAP----ADPPGLS----ALDNLL MLBr_01182|M.leprae_Br4923 --------------------QQVNVDVATPQTAVPDSSSAAAPQLWGGFA Mflv_0325|M.gilvum_PYR-GCK LRFLFEPIFNFLR---DPIGNTFALITDFLTNPVQALITWGPFLLAVVYQ Mvan_0415|M.vanbaalenii_PYR-1 LRFLFEPIFDFLR---DPLGNTIKLITDFLTNPAQALITWGPFLAAVAYQ MSMEG_0619|M.smegmatis_MC2_155 VPGG-QAILDFLK---DPLGNLGRLLTDFMTNPAGALATWWPFLFGVAYQ MAB_4783|M.abscessus_ATCC_1997 FLGMYRALKGLIT---DPVGTIVRIIIDFSTNPAAAIVTWTPLFYVFAYA TH_3113|M.thermoresistible__bu LGTLLAPLLPGATGDGPPMATIMSFLLMGLSNPAYLFPVLVYLLFTGVVH Mb2790c|M.bovis_AF2122/97 GITFVQNAINGAVNTTAWFVMATIRNAVFLGHAFAALN------------ Rv2768c|M.tuberculosis_H37Rv GITFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALN------------ MMAR_1950|M.marinum_M GTPFLQNAINGAVNTAAWFVMAAIPNSVFLGHTLNAIE------------ MUL_4621|M.ulcerans_Agy99 GIPFVANVINGAVNTAAWYTTATIPTAIFLANALNTGA------------ MAV_1347|M.avium_104 GNPVVNNVGNAGFNVVSWNVFNTIVSNILYNHTLDTAA------------ MLBr_01182|M.leprae_Br4923 QHLSPINDTLSMINNHAGMANAGLSLVNGMGSAMKSLA------------ Mflv_0325|M.gilvum_PYR-GCK A----VSWVGASILYPSLFLLPLLATT--LAIVAGVGQ---HLLSLLNTP Mvan_0415|M.vanbaalenii_PYR-1 A----VSWVGASILYPSLLLLPLVATT--LAIVLGVGA---YLLENLPAP MSMEG_0619|M.smegmatis_MC2_155 VFFNLVGWPTWGMIFASPFLIPALAALGITGLVLLIDH---VLNNPVDVP MAB_4783|M.abscessus_ATCC_1997 A-----TFAVMGTPIYAAIMGPAAGISIPLAITLAS------LSQMPEAP TH_3113|M.thermoresistible__bu TTVAVSGMLAQLVPLMPALLPVAVAALGGLAGVWAGLSGLAGLAGLTAVP . . Mb2790c|M.bovis_AF2122/97 PATVTA-AADAVP-AAAAAAGLAHTVTPVGVGGASLTASLGEASSVGGLS Rv2768c|M.tuberculosis_H37Rv PATVTA-AADAVP-AAAAAAGLAHTVTPVGVGGASLTASLGEASSVGGLS MMAR_1950|M.marinum_M TAGAPV-AADLAP-ALAPAAGLRHAVAPLSFGGAGVEAGLGQAAGVGKLS MUL_4621|M.ulcerans_Agy99 PVIAAEGAIEAAEGAAAATAGLANTVTPTGVG-----AALGEATLVGKLA MAV_1347|M.avium_104 AAGVAGEVGGAVG--GGALVGAAAPAT-AGVGAAPVLASMGSAATVGELS MLBr_01182|M.leprae_Br4923 PTTTKA--AESAFKAMGSAVQSTGRGLLGSSSGGHVTAQLGRAASIGSLR Mflv_0325|M.gilvum_PYR-GCK PAEEAAEEPAPAQSAPSRPDQQSFPATMSAPPPPSGAPIAANTVSAGSP- Mvan_0415|M.vanbaalenii_PYR-1 AEDAPAEEPAASSPAPTRADQPSPAIAVSAPPPPSSAAATVGTVATGTA- MSMEG_0619|M.smegmatis_MC2_155 AEDEAPQEVAAAP----RTDQP-LAVGISPAGVPGSAATAAAPAPAPAG- MAB_4783|M.abscessus_ATCC_1997 PVDAPAETVPARIDQPHAVAMGGAPAPTASTAAP--TPTTTSPATPGSA- TH_3113|M.thermoresistible__bu AADGGASAAPVPAGGPSLPSGSSAPPAPTGSAAPTTGTAPGGAGSPPPAG . . . Mb2790c|M.bovis_AF2122/97 ---------VPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAG Rv2768c|M.tuberculosis_H37Rv ---------VPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAG MMAR_1950|M.marinum_M ---------VPVGWSSAAPALTSGTTALDGSGWAVPEESGPIAAMPGGPG MUL_4621|M.ulcerans_Agy99 ---------VPTSWSNALPKTAATTGALGGSGWTVPEEAAPVSGVAGVPG MAV_1347|M.avium_104 ---------TPATWSAPTPEPAATT--VGATEWASPAEEPHTAWATGMPA MLBr_01182|M.leprae_Br4923 ---------VPQTWTTASQPVTAATRALSPARVAVATESESAPLLGGGLP Mflv_0325|M.gilvum_PYR-GCK ----PAPGAPAAAAATFVPYVVAGRDPYEGFSPTVRDSTGAKAPAGTIPA Mvan_0415|M.vanbaalenii_PYR-1 ----PAPGAPAAATASFVPYAVAGRDPGTGFSPTVRDSTSAKAPASGIPA MSMEG_0619|M.smegmatis_MC2_155 ----TTVAAPAPAAATFVPYAVANRDPGEGFTPTLGNKSQVAAPASGVPA MAB_4783|M.abscessus_ATCC_1997 ----PAP-TPPPAGAEGLGYAVRGDGPGFGFGPTIGASTGATAHAPSSAV TH_3113|M.thermoresistible__bu HSVPPAPHSAPPVGTSGPPYLIAAQ-PAPGVARRSAGARRAASIVEPAGS . : . Mb2790c|M.bovis_AF2122/97 ISGAAKGAGAYAG-----PRYGFKPIVMPKQVVV---------------- Rv2768c|M.tuberculosis_H37Rv ISGAAKGAGAYAG-----PRYGFKPIVMPKQVVV---------------- MMAR_1950|M.marinum_M MAVAGKG-GGFAG-----PRYGFKPTVMPKQVVV---------------- MUL_4621|M.ulcerans_Agy99 MAAAAKGAGAYAG-----PRYGFKPIVMPKQVVV---------------- MAV_1347|M.avium_104 VASAGRG-GYGMG-----PRYGVKPKVMPTRLPV---------------- MLBr_01182|M.leprae_Br4923 MAPMVPGGGSGTGGVNTALRLQPRAFVMPRNPAAG--------------- Mflv_0325|M.gilvum_PYR-GCK AASGIAASAAERRKRRRRQKEEIKGRGYADAYADYEELPDDGPPEQPAPR Mvan_0415|M.vanbaalenii_PYR-1 AASGVAASAAERRKRRRRQKDEIAGRAYADAYADYEPEPDDEPPVRQEPR MSMEG_0619|M.smegmatis_MC2_155 AASGVAASLASRRKRRRKKGAQIEERGYADAYMDYEE-PDEDPAPQPEPR MAB_4783|M.abscessus_ATCC_1997 SAAAALACNPATGKSRRRRRRTIDDRGYRHEYATMDDHTPTGP--QDPVT TH_3113|M.thermoresistible__bu AAAAAAARESAPIRRRRGQKDGLHGHRHEHQQPASMS-----------AA : . Mb2790c|M.bovis_AF2122/97 -------------------------------------------------- Rv2768c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_1950|M.marinum_M -------------------------------------------------- MUL_4621|M.ulcerans_Agy99 -------------------------------------------------- MAV_1347|M.avium_104 -------------------------------------------------- MLBr_01182|M.leprae_Br4923 -------------------------------------------------- Mflv_0325|M.gilvum_PYR-GCK VTASTRGAGPMGFAGTVSRG-DEQAGGLTTLAGDSFGGGPREPMLPGTWD Mvan_0415|M.vanbaalenii_PYR-1 IAATERGAGPMGFAGTVSRD-AAQAGGLTTLPGDPFGGGPKAPMLPGTWD MSMEG_0619|M.smegmatis_MC2_155 VRASERGSDAMGFTGTVTRH-DVTAAGLTTLTGDTFDDRPVTPMLPGTWD MAB_4783|M.abscessus_ATCC_1997 AVASGTGAGRLGFAGVHTATTAVEATGLSTLDGDAEN--RTIPMLPGTWD TH_3113|M.thermoresistible__bu TAPSAAGIRVLGGAGRISRT-RGSVPHAEITPGDPTE--PSSPTDRAHRP Mb2790c|M.bovis_AF2122/97 ------------------------ Rv2768c|M.tuberculosis_H37Rv ------------------------ MMAR_1950|M.marinum_M ------------------------ MUL_4621|M.ulcerans_Agy99 ------------------------ MAV_1347|M.avium_104 ------------------------ MLBr_01182|M.leprae_Br4923 ------------------------ Mflv_0325|M.gilvum_PYR-GCK PDATDDRHTDGRDGHDGHDGKEKP Mvan_0415|M.vanbaalenii_PYR-1 PDTEPD------ERHNHHDGKDSQ MSMEG_0619|M.smegmatis_MC2_155 GDENPAP------SPDDPEGGPRR MAB_4783|M.abscessus_ATCC_1997 VTDDDR------------------ TH_3113|M.thermoresistible__bu AEPN--------------------