For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_3808c (-)

annotation: dicarboxylic acid transport integral membrane protein KgtP
coordinates: 3859631 - 3860977
length: 448

AVSAADTSTPSGRAQTRRAIWNTIRGSSGNLVEWYDVYVYTVFAMYFEKQFFDDSDQNSTVYVYAIFAVT
FITRPLGSWFFGRFADRNGRRAALTLSVSLMAACSMVIALVPSRGSIGMAAPIVLILCRLVQGFATGGEY
GTSATYMSEAATRERRGFFSSFQYVTLVGGHVLAQFTLLIILTVFDTAQVHEFGWRIAFATGGVAAIVVY
WLRRTMDESLSEEQLAAIKAGADTSSGSMRELLTRYRKPLLLCFLITMGGTLAFYTYSVNAPAIVKAAYK
DQAMTATWINLAGLIFLMLLQPVGGIISDKVGRKPLLLFFGFGGVVYTYVLITYLPQVHAPIVSFLLVAV
SYVLLTGYTSINALVKSELFPSHVRALGVGVGYALANSVFGGTAPLIYQALKEHDQVPLFIGYVTVCIAI
SLVVYLFFLKNKSQTYLDREQGSAFNR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_3808c--100% (448)dicarboxylic acid transport integral membrane protein KgtP
M. abscessus ATCC 19977MAB_2263c-5e-5732.33% (433) major facilitator transporter
M. abscessus ATCC 19977MAB_4485-4e-3725.86% (437) putative transporter

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3503ckgtP0.081.39% (446) dicarboxylic acid transport integral membrane protein KgtP
M. gilvum PYR-GCKMflv_2381-3e-5531.26% (435) general substrate transporter
M. tuberculosis H37RvRv3476ckgtP0.081.39% (446) dicarboxylic acid transport integral membrane protein KgtP
M. leprae Br4923MLBr_01562-2e-0521.58% (329) putative transmembrane efflux protein
M. marinum MMMAR_4238-7e-3226.42% (386) integral membrane transport protein
M. avium 104MAV_4627-3e-3527.39% (398) major facilitator superfamily protein
M. smegmatis MC2 155MSMEG_0985-0.084.88% (443) sugar transporter family protein
M. thermoresistible (build 8)TH_3400-7e-5230.62% (369) PUTATIVE General substrate transporter
M. ulcerans Agy99MUL_0949-3e-3226.42% (386) integral membrane transport protein
M. vanbaalenii PYR-1Mvan_4266-8e-5732.94% (425) general substrate transporter

CLUSTAL 2.0.9 multiple sequence alignment


MAB_3808c|M.abscessus_ATCC_199      ---------MAVS-AADTSTPSGR---------AQTRRAIWNTIRGS---
MSMEG_0985|M.smegmatis_MC2_155      ---------MTVAGQAHPPTRSGA---------AETRRAIWNTIRGS---
Mb3503c|M.bovis_AF2122/97           ---------MTVS--IAPPSRPSQ---------AETRRAIWNTIRGS---
Rv3476c|M.tuberculosis_H37Rv        ---------MTVS--IAPPSRPSQ---------AETRRAIWNTIRGS---
MMAR_4238|M.marinum_M               --------------------------------------MSRVALACV---
MUL_0949|M.ulcerans_Agy99           --------------------------------------MSRVALACV---
MAV_4627|M.avium_104                ---------MAATLPAPAPAGLADGHPLDESAEQQRRRLRIVVAASL---
Mflv_2381|M.gilvum_PYR-GCK          ---------MTVDEDQRRPS------------GAEPAAVRQAVRGAA---
Mvan_4266|M.vanbaalenii_PYR-1       ---------MTVKET--RP--------------AAPGAVSRAVRGAA---
TH_3400|M.thermoresistible__bu      ---------LTTERTDPPQDPSVE-------QEQPPGVLRKAIAASA---
MLBr_01562|M.leprae_Br4923          MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSKYPTLLPSGRF
                                                                                      

MAB_3808c|M.abscessus_ATCC_199      -----SGNLVEWYDVYVYTVFAMYFEKQFFDD--SDQNSTVYVYAIFAVT
MSMEG_0985|M.smegmatis_MC2_155      -----SGNLVEWYDVYVYTVFATYFEKQFFAE--GDENSTVYVYAIFAVT
Mb3503c|M.bovis_AF2122/97           -----SGNLVEWYDVYVYTVFATYFEDQFFDR--ADRNSTVYVYAIFAVT
Rv3476c|M.tuberculosis_H37Rv        -----SGNLVEWYDVYVYTVFATYFEDQFFDR--ADRNSTVYVYAIFAVT
MMAR_4238|M.marinum_M               -----VGSTVEYYDFCIYGTAAALVFPAVFYPGLSPALATIASMGTFATA
MUL_0949|M.ulcerans_Agy99           -----VGSTVEYYDFCIYGTAAALVFPAVFYPGLSPALATIASMGTFATA
MAV_4627|M.avium_104                -----LGTTVEWYDFFLYATAAGLVFNKVFFPNESSLVGTLLAFATFAVG
Mflv_2381|M.gilvum_PYR-GCK          -----IGNTVEWFDFAIYGFLATYIA-DKFFPSGDETAALLSTFAVFAAA
Mvan_4266|M.vanbaalenii_PYR-1       -----IGNAVEWFDFAIYGFLATYIA-EKFFPPGDETAALLNTFAIFAAA
TH_3400|M.thermoresistible__bu      -----VGNATEWFDYGLYAYGVTYIS-VAIFP-GDGATATLLALMTFAVS
MLBr_01562|M.leprae_Br4923          PSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWGITA
                                          .      .  :       .    :                  . 

MAB_3808c|M.abscessus_ATCC_199      FITRPLGSWFFG-RFADRNGRRAALTLSVSLMAACSMVIALVPSRG----
MSMEG_0985|M.smegmatis_MC2_155      FLTRPIGSWFFG-RFADRRGRRAALTFSVSLMALCSLVIAIVPSRE----
Mb3503c|M.bovis_AF2122/97           FVTRPVGSWFFG-RFADRRGRRAALTFSVSLMAACSLIVALVPSRS----
Rv3476c|M.tuberculosis_H37Rv        FVTRPVGSWFLG-RFADRRGRRAALTFSVSLMAACSLIVALVPSRS----
MMAR_4238|M.marinum_M               FLSRPLGAAVFG-HFGDRLGRKKTLVATLLIMALSTVTVGVVPSTA----
MUL_0949|M.ulcerans_Agy99           FLSRPLGAAVFG-HFGDRLGRKKTLVATLLIMALSTVTVGVVPSTA----
MAV_4627|M.avium_104                FVMRPIGGLVFG-HIGDRIGRKRSLALTMLIMGGATALIGVLPTAA----
Mflv_2381|M.gilvum_PYR-GCK          FFMRPLGGFFFG-PLGDRIGRQRVLAIVILLMSASTLAIGLVPSYD----
Mvan_4266|M.vanbaalenii_PYR-1       FFMRPLGGFFFG-PLGDRIGRQRVLALVILLMSASTLAIGLVPGYD----
TH_3400|M.thermoresistible__bu      FLVRPLGGFVWG-PLGDRLGRRQVLAITILLMAGATFCVGLVPSYD----
MLBr_01562|M.leprae_Br4923          YVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEVTLVI
                                    :.    *  . *  :.*  **:  :   : ::  .:   .:         

MAB_3808c|M.abscessus_ATCC_199      -----SIGMAAPIVLILCRLVQGFATG-GEYGTSATYMSEAATRERRGFF
MSMEG_0985|M.smegmatis_MC2_155      -----VIGAAAPVILILCRLVQGFATG-GEYGTSATYMSEAATRERRGFF
Mb3503c|M.bovis_AF2122/97           -----SIGVAAPILLILCRLVQGFATG-GEYGTSVTYMSEAATRERRGYF
Rv3476c|M.tuberculosis_H37Rv        -----SIGVAAPILLILCRLVQGFATG-GEYGTSATYMSEAATRERRGYF
MMAR_4238|M.marinum_M               -----TIGVSAPLILVALRLLQGFAVG-GEWAGSALLSIESAPAHKRGYY
MUL_0949|M.ulcerans_Agy99           -----TIGVSAPLILVALRLLQGFAVG-GEWAGSALLSIESAPAHKRGYY
MAV_4627|M.avium_104                -----QIGAWAPVLLLVLRVLQGFALG-GEWGGAVLLAVEHSPGDRRGRY
Mflv_2381|M.gilvum_PYR-GCK          -----SIGVLAPILLLVLRCLQGFSAG-GEYGSGACFLAEYAPNRHRGFV
Mvan_4266|M.vanbaalenii_PYR-1       -----SIGVLAPILLLLLRCLQGFSAG-GEYGSGACFLAEYAPDRHRGFV
TH_3400|M.thermoresistible__bu      -----SIGLWAPVLMVILRMIQGFSTG-GEYGGAATFMAEYAPSRRRGLL
MLBr_01562|M.leprae_Br4923          ARLLQGIGSAIASPTGLALVATTFSKGSARNTATAVFAAMTAIGSVMGLV
                                          **   .           *: * ..    .      :     *  

MAB_3808c|M.abscessus_ATCC_199      S--SFQYVTLVGGHVLAQFTLLIILTVFD--TAQVHEFGWRIAFATGGVA
MSMEG_0985|M.smegmatis_MC2_155      S--SFQYVTLVGGHVLAQFTLLIILTAFT--TEQVHDFGWRIGFAIGGVA
Mb3503c|M.bovis_AF2122/97           S--SFQYVTLVGGHVLAQFTLLVILAVFT--REQVHEFGWRIGFAVGGGA
Rv3476c|M.tuberculosis_H37Rv        S--SFQYVTLVGGHVLAQFTLLVILAVFT--REQVHEFGWRIGFAVGGGA
MMAR_4238|M.marinum_M               G--MFTVLGGGVALVVSGLTFLGVNYTIGESSSAFLQWGWRVPFLLSALL
MUL_0949|M.ulcerans_Agy99           G--MFTVLGGGVALVVSGLTFLGVNYTIGESSSALLQWGWRVPFLLSALL
MAV_4627|M.avium_104                G--AVPQVGLALGLALGTGIFAFLQIVLG--PARFLSYGWRIGFLLSVLL
Mflv_2381|M.gilvum_PYR-GCK          V--SFLVWSVVVGFLAGAITVTALETWLS--EDAMNSYGWRIPFMIAGLL
Mvan_4266|M.vanbaalenii_PYR-1       V--SFLVWSVVVGFLLGSVTVTALEATLS--ESAMNSFGWRIPFLIAGAL
TH_3400|M.thermoresistible__bu      G--SFLEFGTLAGFSLGALMMLGVSLMLS--DDQMNTWGWRVPFLIAAPL
MLBr_01562|M.leprae_Br4923          VGGALTEVSWRLAFLVNVPIGLVMIYLARTALHETHKERMKLDAAGAILA
                                        .       .          :                ::    .   

MAB_3808c|M.abscessus_ATCC_199      AIVVYWLRRTMDESLSEEQLAAIKAGADTSS---GSMRELLT--------
MSMEG_0985|M.smegmatis_MC2_155      AIVVFWLRRTMDESLSEEQLEAIKTGKDTSS---GSLGELLT--------
Mb3503c|M.bovis_AF2122/97           AIVVFWLRRTMDESLSQERLTAIKAGRDHDS---GSLRELAT--------
Rv3476c|M.tuberculosis_H37Rv        AIVVFWLRRTMDESLSQERLTAIKAGRDHDS---GSLRELAT--------
MMAR_4238|M.marinum_M               IAFALYVRLEINETPVFARAMAQADDQESTAAARAPLAAVLC--------
MUL_0949|M.ulcerans_Agy99           IAFALYVRLEINETPVFARAMAQADDQESTAAARAPLAAVLC--------
MAV_4627|M.avium_104                VAIGIVVRLRVEETPAFR------ELQDLQAASTVPIRDILRE-------
Mflv_2381|M.gilvum_PYR-GCK          GAVGLYIRLKLGDTPEFRSLR---ESGEVSQ---SPLREAVT--------
Mvan_4266|M.vanbaalenii_PYR-1       GAVGLYIRLRLGDTPEFEALR---ESGEVST---TPLKEAVT--------
TH_3400|M.thermoresistible__bu      GLIGLYLRSRLDDTPIFRELQ---ESDREEKSIWTEFKDLLV--------
MLBr_01562|M.leprae_Br4923          TLACTAAVFAFSMGPEKGWISLTTIGSGLVALVAAIAFAVVERTAENPVV
                                              .                                       

MAB_3808c|M.abscessus_ATCC_199      ----RYRKPLLLCFLITMGGTLAFYTYSVNAPAIVKAAYKDQAMTATWIN
MSMEG_0985|M.smegmatis_MC2_155      ----RYPKALLMCFLITLGGTIAFYTYSVNAPAIVKTTYKDQAMTATWIN
Mb3503c|M.bovis_AF2122/97           ----HYWKPLLLCFLVTLGGTVAFYTYSVNAPAIVKSVYGSQAMTATWIN
Rv3476c|M.tuberculosis_H37Rv        ----HYWKPLLLCFLVTLGGTVAFYTYSVNAPAIVKSVYGSQAMTATWIN
MMAR_4238|M.marinum_M               ----RQRREIVLAAGAMLAAFGCLYLASTFLPSYAQLHLGYSRNLVLLIG
MUL_0949|M.ulcerans_Agy99           ----RQRREIVLAAGAMLAAFGCLYLASTFLPSYAQLHLGYSRNLVLLIG
MAV_4627|M.avium_104                ---RRSRRNTVLGLLSRWAEGSAFNTWGVFAISYATGALGLNRVSVLIAV
Mflv_2381|M.gilvum_PYR-GCK          ----TSWRPILQIIGLVVIHNVGFYIVYTFLPSYFTETLDFSKVDAFWSI
Mvan_4266|M.vanbaalenii_PYR-1       ----TSWRPILQIIGLVVVHNVGFYVVYTFLPSYFTRTLEFSKIDAFYSI
TH_3400|M.thermoresistible__bu      ----EYRGQILRLGGLVVALNVVNYTLLSYMPTYLQTSIGLSTDTALVVP
MLBr_01562|M.leprae_Br4923          PFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIGLYIQDILGYSALRAGIGF
                                              :                              .   .    

MAB_3808c|M.abscessus_ATCC_199      LAGLIFLMLLQPVGGIISDKVGRKPLLLFFGFGGVVYTYVLITYLPQVHA
MSMEG_0985|M.smegmatis_MC2_155      LFGLIFLMLLQPVGGLISDKVGRKPLLLWFGFGGVIYTYILITYLPQTHS
Mb3503c|M.bovis_AF2122/97           LVGLILLMMLQPIGGMISDKIGRKPLLLWFGVGGLIYTYVLVTYLPETRS
Rv3476c|M.tuberculosis_H37Rv        LVGLILLMMLQPIGGMISDKIGRKPLLLWFGVGGLIYTYVLVTYLPETRS
MMAR_4238|M.marinum_M               VLGGLVCIGFVALSAILCDRFGRRRVMLVGWAVGLFWSPLVMPLIGSGDT
MUL_0949|M.ulcerans_Agy99           VLGGLVCIGFVALSAILCDRFGRRRVMLVGWAVGLFWSPLVMPLIGSGDT
MAV_4627|M.avium_104                TIAALLMAVLLPVSGVLTDRFGARRVYLAGIACYGLAAFPAFALFGTKKL
Mflv_2381|M.gilvum_PYR-GCK          TVASLVGIVLIPPLGALSDRIGRKSLLIAGAVAFAVFAYPLFLLLNTGSL
Mvan_4266|M.vanbaalenii_PYR-1       TVASLVGIVLIPPLGALSDRVGRKPLLLAGSIGFAVFAYPLFLLLNTGSL
TH_3400|M.thermoresistible__bu      IIGMLSMMVFLPFAGLLSDRFGRKPMWWISLGGLLALVVPMFMLMST-SV
MLBr_01562|M.leprae_Br4923          IPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWLLMVAMLYGWAFMNRGVP
                                        :         . : .:.. : :                  :     

MAB_3808c|M.abscessus_ATCC_199      PIVSFLLVAVSYVLLTGYTSINALVKSELFPSHVRALGVGVGYALANSVF
MSMEG_0985|M.smegmatis_MC2_155      AIMSFLLVAGGYIILTGYTSINAVVKAELFPSHIRALGVGVGYALANSLV
Mb3503c|M.bovis_AF2122/97           PTMSFLLVAVGYVILTGYCSINALVKSELFPAHVRALGVGVGYALANSVF
Rv3476c|M.tuberculosis_H37Rv        PTMSFLLVAVGYVILTGYCSINALVKSELFPAHVRALGVGVGYALANSVF
MMAR_4238|M.marinum_M               VGFTVALLGLY-AVAASGFGPAASLIPELFATRYRYTGTALALNVAGIVG
MUL_0949|M.ulcerans_Agy99           VGFTVALLGLY-AVAASGFGPAASLIPELFATRYRYTGTALALNVAGIVG
MAV_4627|M.avium_104                LWFGLAMVIVFGVVHALFYGAQGTLYSALYPTNTRYTGLSFVYQFSGVYA
Mflv_2381|M.gilvum_PYR-GCK          AAAIAAHAALA-AIESVFVSASLAAGAELFATKVRSSGYSIGYNVSVAVF
Mvan_4266|M.vanbaalenii_PYR-1       AAAIAAHAALA-AIEAVFVCASLAAGAELFATRVRSSGYSIGYNVSVAIF
TH_3400|M.thermoresistible__bu      PGAIIGFAVLG-LLYVPQLATISATFPAMFPTHVRYAGFAIAYNVSTSLF
MLBr_01562|M.leprae_Br4923          YFPNLLAPIVVGGIGIGMAVVPLTLSAIAGVGFDRIGPVSAIALMLQSLG
                                                 :            .       *    .    .     

MAB_3808c|M.abscessus_ATCC_199      GGTAPLIYQALKEH------------------------DQVPLFIGYVTV
MSMEG_0985|M.smegmatis_MC2_155      GGTAPVIYQALKER------------------------DQVPLFIGYVTV
Mb3503c|M.bovis_AF2122/97           GGTAPLIYQALKER------------------------DQVPMFIAYVTA
Rv3476c|M.tuberculosis_H37Rv        GGTAPLIYQALKER------------------------DQVPMFIAYVTA
MMAR_4238|M.marinum_M               GAAPPLIAGTLLAS------------------------YGSS-AVGLMMT
MUL_0949|M.ulcerans_Agy99           GAAPPLIAGTLLAS------------------------YGSS-AVGLMMT
MAV_4627|M.avium_104                SGVTPMILTALIAA------------------------LGG--APWLACG
Mflv_2381|M.gilvum_PYR-GCK          GGTAPYVATWLVSR------------------------TGNDIAPAYYLI
Mvan_4266|M.vanbaalenii_PYR-1       GGTAPYVATWLVSR------------------------TGNDIAPAFYVI
TH_3400|M.thermoresistible__bu      GGTAPAANDWLIQQ------------------------TGNNLMPAFYMM
MLBr_01562|M.leprae_Br4923          GPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQLRALDHGYTYGLLWVAG
                                    .         :                                       

MAB_3808c|M.abscessus_ATCC_199      CIAISLVVYLFFLKNKSQTYLDREQGSAFNR-------------
MSMEG_0985|M.smegmatis_MC2_155      CIAISLVVYLFYLKNKSETYLDREKGAAFVR-------------
Mb3503c|M.bovis_AF2122/97           CIAVSLIVYVFFIKNKADTYLDREQGFAFYGHA-----------
Rv3476c|M.tuberculosis_H37Rv        CIAVSLIVYVFFIKNKADTYLDREQGFAFYGHA-----------
MMAR_4238|M.marinum_M               ALVAASLLCTYLLPETAGAPLTAA--------------------
MUL_0949|M.ulcerans_Agy99           ALVAASLLCTYLLPETAGAPLTAA--------------------
MAV_4627|M.avium_104                YLVATAVISVLATALIRDRDLYL---------------------
Mflv_2381|M.gilvum_PYR-GCK          AAAIVSLLTVLTMRETARKPLR----------------KLVHP-
Mvan_4266|M.vanbaalenii_PYR-1       AAAVVTFLTVLTMRETARQPLR----------------KLVSD-
TH_3400|M.thermoresistible__bu      AACLVGMLALVKLPETARCPIGGTEIPGTEDAPPPVEYDLVGNR
MLBr_01562|M.leprae_Br4923          AVVIVGVAALFIGYTPEQVAYAQEVKEAVDAGEL----------
                                          .