For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4497 | - | - | 100% (210) | putative transcriptional regulator, TetR family |
| M. thermoresistible (build 8) | TH_3734 | - | 8e-91 | 81.50% (200) | PUTATIVE putative transcriptional regulator, TetR family |
| M. thermoresistible (build 8) | TH_2894 | - | 3e-25 | 36.13% (191) | PUTATIVE transcriptional regulator, TetR family |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3076c | - | 5e-06 | 29.85% (134) | AsnC family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2097 | - | 2e-26 | 37.57% (189) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3050c | - | 5e-06 | 29.85% (134) | AsnC family transcriptional regulator |
| M. leprae Br4923 | MLBr_01733 | - | 3e-06 | 40.91% (66) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_2812 | - | 3e-07 | 45.90% (61) | TetR family transcriptional regulator |
| M. marinum M | MMAR_1569 | - | 1e-15 | 30.00% (190) | putative regulatory protein |
| M. avium 104 | MAV_1858 | - | 8e-18 | 29.59% (196) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_3142 | - | 5e-07 | 26.00% (150) | HTH-type transcriptional repressor AcnR |
| M. ulcerans Agy99 | MUL_3464 | - | 1e-15 | 30.00% (190) | putative regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_4608 | - | 3e-29 | 36.45% (203) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1569|M.marinum_M --MSDIAATMKCRLRVSRKRLVGTYGSMTHPNNPGTRRQADLSSRLTRRR
MUL_3464|M.ulcerans_Agy99 --MSDIAATMKCRLRVSRKRLVGTYGSMTHPNNPGTRRQADLSSRLTRRR
Mflv_2097|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4608|M.vanbaalenii_PYR-1 -------------------------------------------------M
TH_4497|M.thermoresistible__bu -----------------------------------------------VAE
Mb3076c|M.bovis_AF2122/97 -----------------------------MVRIPRPHPSAKPGVKVDARS
Rv3050c|M.tuberculosis_H37Rv -----------------------------MVRIPRPHPSAKPGVKVDARS
MLBr_01733|M.leprae_Br4923 MTRRSIHTRKPLKWSGCAGQHVRSGKVFDVGRISLSYPSMKPGVKIDARS
MAV_1858|M.avium_104 --------------------------------------------------
MAB_2812|M.abscessus_ATCC_1997 -----------------------------------------MATRGRGRP
MSMEG_3142|M.smegmatis_MC2_155 ------------------------------------------------MP
MMAR_1569|M.marinum_M HKLAPD-PGIRRAILVAASMSVRE-----HGVRGLSVATVLDRAQLSTRA
MUL_3464|M.ulcerans_Agy99 HKLAPD-PGIRRAILVAASMSVRE-----HGVRGLSVATVLDRAQLSTRA
Mflv_2097|M.gilvum_PYR-GCK --------------MEAAYRCLAD-----PHAGPVSMAAILGTAGVSSRA
Mvan_4608|M.vanbaalenii_PYR-1 QPGPDH-DGDRRRIIEAAYRCLAQ-----PHAGPIPMTSILRSAGLSSRA
TH_4497|M.thermoresistible__bu TRTVDR-SSERQHIIDAAYRCLHR-----NAGSAVSITEILDEAGLGTRA
Mb3076c|M.bovis_AF2122/97 ERWREHRKKVRNEIVDAAFRAIDR-----LGP-ELSVRQIAEEAGTAKPK
Rv3050c|M.tuberculosis_H37Rv ERWREHRKKVRNEIVDAAFRAIDR-----LGP-ELSVRQIAEEAGTAKPK
MLBr_01733|M.leprae_Br4923 ERWREHRKKVRGEIVDAAFRALDR-----LGP-EVSVREIAEEAGTAKPK
MAV_1858|M.avium_104 -MSDHRRPTERDAIMRAAYRLISEGAAGPSASSSTSIENILRVARVNRRV
MAB_2812|M.abscessus_ATCC_1997 SGAPYDRKLRTEELLDAAERAIRN------SGGTVSIAEVAREAGFARSA
MSMEG_3142|M.smegmatis_MC2_155 RVTDDHLAARRRQILDGARRCFAK-----YGYESATVRRLEETIGLSRGA
: .* . .: :
MMAR_1569|M.marinum_M FYRHFESKDQLVAAVFLEVARVEAVRLRTLMAKATN-PIEGVAAWIDGRL
MUL_3464|M.ulcerans_Agy99 FYRHFESKDQLVAAMFLEVARVEAVRLRTLMAKATN-PIEGVAAWIDGRL
Mflv_2097|M.gilvum_PYR-GCK FYRHFESKDDLFLALLEQECSAVVGQVDRVADAAQGSPADQLAAWIEAMF
Mvan_4608|M.vanbaalenii_PYR-1 FYRHFLSKDDLFLALLRQECEAVIAQVDRIADAAVGSPADQLADWIAAMF
TH_4497|M.thermoresistible__bu FYRNFSTKHDLLLELFRRDRDAVRAQLREVVARAEG-PVEALRAWMAHML
Mb3076c|M.bovis_AF2122/97 IYRHFTDKSDLLEAIGMRLRDMLWAAIFPSLDLATDSAREVIRRSVEEYV
Rv3050c|M.tuberculosis_H37Rv IYRHFTDKSDLLEAIGMRLRDMLWAAIFPSLDLATDSAREVIRRSVEEYV
MLBr_01733|M.leprae_Br4923 IYRHFTDKSDLFEAIGIRLRDMLWAAIFPAIDLATDSAREIIRRSVDEYV
MAV_1858|M.avium_104 FYRHFASKDDLIIAMQEWAGDLILADLQKAVAAADT-PAAAVAAWIEDYL
MAB_2812|M.abscessus_ATCC_1997 CYAVFPTKADLLRSLSRRHADRLISGAWQHSMVGDT--RDQIRAFSTLVI
MSMEG_3142|M.smegmatis_MC2_155 IFHHFKDKDTLFFELAREDAERMAEVAAR----------EGLIQVMRDLL
: * * *. : : .
MMAR_1569|M.marinum_M DLAFDDAVKADLRHLSMDAQSHLLNTPELVEPAYAETLEPLIEQLHLGVA
MUL_3464|M.ulcerans_Agy99 DLAFDDAVKADLRHLSMGAQSHLLNAPELVEPAYAETLEPLIEQLHLGVA
Mflv_2097|M.gilvum_PYR-GCK DIVVDPRQRLQLTVIDSEEVRTAKGYRQTRDRLHAARERGLAEILRRGLR
Mvan_4608|M.vanbaalenii_PYR-1 DIIVDPQQRLQLTVIDSDEVRAAKGYREMRERLHAERERSLAEILRRGRR
TH_4497|M.thermoresistible__bu DLVSNPRKRKRMATFYSEEMRRTPGYDRELEIMSAADQASIAAILHRGKA
Mb3076c|M.bovis_AF2122/97 NLVDQHPNVLRVFIQGRSAKQSEATVRTLNE--GREITLAMAEMFNNELR
Rv3050c|M.tuberculosis_H37Rv NLVDQHPNVLRVFIQGRSAKQSEATVRTLNE--GREITLAMAEMFNNELR
MLBr_01733|M.leprae_Br4923 SLVDKHPNVLRVFIQGRFSAQSEATVRTLDE--GREITLTMAEMFNNELR
MAV_1858|M.avium_104 SIGWQEARFRDALAFMSAEVIGAPGIAAALEVTYDRHRAVLTEALAAGLA
MAB_2812|M.abscessus_ATCC_1997 DWISAEP------ELYIALDRDLTAQEQLDHGVFDLIAQVTEEHLHAQFP
MSMEG_3142|M.smegmatis_MC2_155 AAPEQYDWLATRLEIAR-KLRNDPDFHRGWAERSAELTAATTERLRRQKQ
:
MMAR_1569|M.marinum_M QEVFHDVDPHSEARSIQGVVWANTEQQWASGDC-----RRDEVRESTVRF
MUL_3464|M.ulcerans_Agy99 QEVFHDVDPHSEARSIQGVVWANTEQQWASGDC-----RRDEVRESTVRF
Mflv_2097|M.gilvum_PYR-GCK DGSFPLTEPEADAVAINAVVSRVLNTQTTDEPE-----ARKKALVAVLDF
Mvan_4608|M.vanbaalenii_PYR-1 DGSFPLAEPEIDAVAVNALVSRLLVRQTTDDPQ-----ARKQAEVAVLDF
TH_4497|M.thermoresistible__bu EGIFTECAPESDARTIRAAVEAALLDRFQQKTTG----SVADEVDHLMGF
Mb3076c|M.bovis_AF2122/97 EMELNRAALELAAFAAFGSAASATEWWLGPEPDSPRRMPREQFVAHLTTI
Rv3050c|M.tuberculosis_H37Rv EMELNRAALELAAFAAFGSAASATEWWLGPEPDSPRRMPREQFVAHLTTI
MLBr_01733|M.leprae_Br4923 EMELNRAASELAAFAAFGSVASATEWWLGPEPDSPRRMPREQFVAHLTII
MAV_1858|M.avium_104 DGSLPNAHPELDSFAIHAVTVRHLEARIRGRLDS----DFREVRDQIVTL
MAB_2812|M.abscessus_ATCC_1997 GDQMTRLAPIWSRLAVGGVLMTINWWSASRTMT------QDDLIGYIVET
MSMEG_3142|M.smegmatis_MC2_155 AGRLRDDVPSAVLHIYLDVVLDGLVARLASGEDSKNLSAVLDLVEASVRQ
: .
MMAR_1569|M.marinum_M CLRGLGVAPDTIAQITAPD--------------
MUL_3464|M.ulcerans_Agy99 CLRGLGVAPDTIAQITAPD--------------
Mflv_2097|M.gilvum_PYR-GCK ALRAVGAAAR-----------------------
Mvan_4608|M.vanbaalenii_PYR-1 ALRAVGAVPGGQDTRR-----------------
TH_4497|M.thermoresistible__bu VLRGLGAAGMEGAPDDR----------------
Mb3076c|M.bovis_AF2122/97 MMGVIVGTAEALGIAVDPDQPIHDAVPNNPAVR
Rv3050c|M.tuberculosis_H37Rv MMGVIVGTAEALGIAVDPDQPIHDAVPNNPAVR
MLBr_01733|M.leprae_Br4923 MMAVIVGTAETLGISMNPDRPIHDAVPLDRSAS
MAV_1858|M.avium_104 MLTGLSAPAVYRTATR-----------------
MAB_2812|M.abscessus_ATCC_1997 FAEGIGEGSRLVAANC-----------------
MSMEG_3142|M.smegmatis_MC2_155 QPKPAPAVSTDHSFSDES---------------