For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4007 | - | - | 100% (296) | alpha/beta hydrolase fold |
M. thermoresistible (build 8) | TH_2570 | - | 9e-55 | 44.10% (288) | PUTATIVE alpha/beta hydrolase fold |
M. thermoresistible (build 8) | TH_1408 | - | 5e-41 | 36.43% (291) | alpha/beta hydrolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2330c | - | 4e-05 | 31.25% (112) | hypothetical protein Mb2330c |
M. gilvum PYR-GCK | Mflv_3465 | - | 3e-50 | 42.86% (308) | peptidase S15 |
M. tuberculosis H37Rv | Rv2307c | - | 4e-05 | 31.25% (112) | hypothetical protein Rv2307c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2608 | - | 2e-35 | 36.18% (293) | putative hydrolase, alpha/beta fold |
M. marinum M | MMAR_0385 | - | 2e-48 | 41.58% (291) | hypothetical protein MMAR_0385 |
M. avium 104 | MAV_2688 | - | 2e-07 | 42.42% (66) | alpha/beta hydrolase |
M. smegmatis MC2 155 | MSMEG_4450 | - | 3e-45 | 37.37% (297) | alpha/beta hydrolase |
M. ulcerans Agy99 | MUL_1035 | - | 2e-46 | 40.68% (295) | hypothetical protein MUL_1035 |
M. vanbaalenii PYR-1 | Mvan_1417 | - | 7e-50 | 41.37% (307) | peptidase S15 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3465|M.gilvum_PYR-GCK --MTAGWTTSAVSFPCDGEQIAGVLY--RPEGGAPPFPCVVFAHGFSGTM Mvan_1417|M.vanbaalenii_PYR-1 --MGVGFTTRQVSFSSGGSRIAAELY--LPAG-PGPYPAVVFAHGFSGTM TH_4007|M.thermoresistible__bu -------VSTPVTFPAGGETCVGRLYGDAPGPADARKPCVVLCHGFGGTQ MMAR_0385|M.marinum_M -----MTQRQDVRFPCGEAMISAWLYRPAGADPARPVPMLVMAHGLGAVR MUL_1035|M.ulcerans_Agy99 -----MTQRQDVRFPCGEALISAWLYRPAGADPARPVPMLVMAHGLGAVR MAV_2688|M.avium_104 -------------------------------------------------- MSMEG_4450|M.smegmatis_MC2_155 MAQPLSYTRDDVTFMSDGTSCAAWLYRPDGVNNP---PIVVLAHGFAAFR MAB_2608|M.abscessus_ATCC_1997 ------MNRQSIRFNSHGIDCEAWLYRAQTVEDT--APIVVMAHGVGGTK Mb2330c|M.bovis_AF2122/97 ----------------------------MSLKRCRALPVVAIVALVASGV Rv2307c|M.tuberculosis_H37Rv ----------------------------MSLKRCRALPVVAIVALVASGV Mflv_3465|M.gilvum_PYR-GCK DW-ILPDFAAVFCAAGLAVLTFDYRGFGSSEGTPRQIVNSARQLEDIRAA Mvan_1417|M.vanbaalenii_PYR-1 DW-ILPDFASVFAAGGLAVLLFDYRHFGSSEGQPRQLVDTGCQLEDIRAA TH_4007|M.thermoresistible__bu DTPAFTATARDFVRAGYLALTLDYRRFGESSGLPRQLVNIADQLDDIAAA MMAR_0385|M.marinum_M TM-RLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAA MUL_1035|M.ulcerans_Agy99 TM-RLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAA MAV_2688|M.avium_104 -------------------------------------------------- MSMEG_4450|M.smegmatis_MC2_155 EL-RLDAYAARFAQAGYAALVFDYRHWGASDGQPRRILDIPKQQTDWRAA MAB_2608|M.abscessus_ATCC_1997 DS-GLEPFAVRLAEAGMHALAFDYRGFGASDGFPRQHVSFTHQIGDYHAA Mb2330c|M.bovis_AF2122/97 ITFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGG Rv2307c|M.tuberculosis_H37Rv IMFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGG Mflv_3465|M.gilvum_PYR-GCK LDVVRNRADVDPGRIGLWGTSLGGSHVLQIAAEDPRVAAVVANVPALDMY Mvan_1417|M.vanbaalenii_PYR-1 LAYARAHEAIDARRIGLWGTSLGGSHVINVASADPRIAAVVATVPALDMY TH_4007|M.thermoresistible__bu VGHARTHPGVDPDRIVLWGTSLGGGHVVTAAARDPRIAAVIAQIP----Y MMAR_0385|M.marinum_M VAYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCPFTD-- MUL_1035|M.ulcerans_Agy99 VAYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCPFTD-- MAV_2688|M.avium_104 -------------------------------------------------- MSMEG_4450|M.smegmatis_MC2_155 IAYARSLDNVDTTRLVGWGSSFGGGHVLTLAARDHEFAAAIVQVPHVS-- MAB_2608|M.abscessus_ATCC_1997 VNMARRLPGVDPTRIVLWGVSLAGGHVMAVAGARNDVAAVIALTPLVD-- Mb2330c|M.bovis_AF2122/97 WYFPHTSGGSGPAVLVCNGNAGDRSMRAELAVALHGLGLSVLLFDYRG-- Rv2307c|M.tuberculosis_H37Rv WYFPHTSGGSGPAVLVCNGNAGDRSMRAELAVALHGLGLSVLLFDYRG-- Mflv_3465|M.gilvum_PYR-GCK TGLRGRHRSPDYRPGPAQIVVAVARLLSAAVVDEVRGRLGRSPRYLPVYG Mvan_1417|M.vanbaalenii_PYR-1 VGLRGRHRPATFRPGPARTVIATLRLVGAAALDAIRGRCGLRPYYLPVYG TH_4007|M.thermoresistible__bu NGFP--------RKVEGRSTAATLRLLAVMVRDATRGALGLSPVYIKQVG MMAR_0385|M.marinum_M ----------GIASVLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAG MUL_1035|M.ulcerans_Agy99 ----------GIASVLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAG MAV_2688|M.avium_104 -------------------------------------------------- MSMEG_4450|M.smegmatis_MC2_155 ----------GPASAFSQSPKLVARLIAAGLRDQIGAWFGGAPHRVTSIG MAB_2608|M.abscessus_ATCC_1997 ----------GIAAARSAMTEHSAGTLLRSAVTGLRSRLGRQQRTIPIVG Mb2330c|M.bovis_AF2122/97 -----------YGGNPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFG Rv2307c|M.tuberculosis_H37Rv -----------YGGNPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFG Mflv_3465|M.gilvum_PYR-GCK RLGRAFFADPALAQRFRAVEAQ---------APSWRNAVAPRFLLHAPRY Mvan_1417|M.vanbaalenii_PYR-1 PLGHAVFSDPALAERFRHVESN---------SPTWRNEVTPRFLFHAPRY TH_4007|M.thermoresistible__bu PAGETAVIAGARAQQTVDAMT----------SATWRNEVAPRSLWDMWRY MMAR_0385|M.marinum_M KPGEVALMTAPDAYPGYLGLMP--------QGTQVPNEVAARIGIKVLGY MUL_1035|M.ulcerans_Agy99 KPGEVALMTAPDAYPGYLGLMP--------QGTQVPNEVAARIGIKVLGY MAV_2688|M.avium_104 -------------------------------------------------- MSMEG_4450|M.smegmatis_MC2_155 RPGEFAMMTSPGAYELVEEMAGGEAAEHMRAQLEAENDVAARIALRVPLY MAB_2608|M.abscessus_ATCC_1997 RAGELAALTSDGYYEAHLAIAG----------PAWRNEIDATVGTQLVSY Mb2330c|M.bovis_AF2122/97 ESLGAAVAVGLAVQRPPAALVLRSPFTSLAEVGAVHYPWLPLRRLLLDHY Rv2307c|M.tuberculosis_H37Rv ESLGAAVAVGLAVQRPPAALVLRSPFTSLAEVGAVHYPWLPLRRLLLDHY Mflv_3465|M.gilvum_PYR-GCK RDGTIER-VRCPVLVTLARDDAEVSTPFVERKVRRGRDV----EIRKYPA Mvan_1417|M.vanbaalenii_PYR-1 RDGTVER-IRCPVLVTLARDDAEVSSPYVRRKLGHAADV----EIMEYPV TH_4007|M.thermoresistible__bu RPGAHASFVRAPLLVCLGANDAETPAEKAAELARRAPRG----ELRTYDH MMAR_0385|M.marinum_M RPGRSARKIACPILFCVCETDSVAPAGPTLRYAARAPRG----EVIRYPE MUL_1035|M.ulcerans_Agy99 RPGRSARKIACPILFCVCETDSVAPAGPTLRYAARAPRGEVSGEVIRYPE MAV_2688|M.avium_104 --------MSCPILFAICENDTVAPAKATQKYAAQAPRG----EIKLYDA MSMEG_4450|M.smegmatis_MC2_155 SPGRHAAKITAPTLVQLATKDDVTPYAKARKIVARIPNG----EVRSYDI MAB_2608|M.abscessus_ATCC_1997 RPTRCASRIGCPILVQIADFDRAAPPHAAAKAAFKARA-----EVRHYPC Mb2330c|M.bovis_AF2122/97 PSIERIASVHAPVLVIAGGSDDIVPATLSEWLVAAAAEPKRYVVVPGVGH Rv2307c|M.tuberculosis_H37Rv PSIERIASVHAPVLVIAGGSDDIVPATLSERLVAAAAEPKRYVVVPGVGH : .* *. * .. : Mflv_3465|M.gilvum_PYR-GCK GHFDMYHG-AVRDEVARDQREFLIRHLQ--PDRAARKDR--- Mvan_1417|M.vanbaalenii_PYR-1 AHFDVYHG-PVRAEIARDQRDFLVRHLLRGPNRATNSSGCGR TH_4007|M.thermoresistible__bu AHFEFDRD-DVRRRVTADQLAFLARVLPR------------- MMAR_0385|M.marinum_M GHFAIYLG-DAFERVVADQLGFLDKHLKPAGQP--------- MUL_1035|M.ulcerans_Agy99 GHFAIYLG-DAFEHVVADQLGFLDKHLKPAGQP--------- MAV_2688|M.avium_104 GHFDIYVG-ADFERNVTDQLNFLSRHVPVS------------ MSMEG_4450|M.smegmatis_MC2_155 THFEPYVD-PHFEQIVTDQIDFLNRHVGAGTR---------- MAB_2608|M.abscessus_ATCC_1997 DHFGVYHGQECHELVIGHQISFLSRHLSIEAVSHTEALHG-- Mb2330c|M.bovis_AF2122/97 NDPELLDG----RVMLDAIRRFLTETAVLGQ----------- Rv2307c|M.tuberculosis_H37Rv NDPELLDG----RVMLDAIRRFLTETAVLGQ----------- . . ** .