For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GVGFTTRQVSFSSGGSRIAAELYLPAGPGPYPAVVFAHGFSGTMDWILPDFASVFAAGGLAVLLFDYRHF GSSEGQPRQLVDTGCQLEDIRAALAYARAHEAIDARRIGLWGTSLGGSHVINVASADPRIAAVVATVPAL DMYVGLRGRHRPATFRPGPARTVIATLRLVGAAALDAIRGRCGLRPYYLPVYGPLGHAVFSDPALAERFR HVESNSPTWRNEVTPRFLFHAPRYRDGTVERIRCPVLVTLARDDAEVSSPYVRRKLGHAADVEIMEYPVA HFDVYHGPVRAEIARDQRDFLVRHLLRGPNRATNSSGCGR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1417 | - | - | 100% (321) | peptidase S15 |
M. vanbaalenii PYR-1 | Mvan_2419 | - | 2e-44 | 37.62% (303) | alpha/beta hydrolase fold |
M. vanbaalenii PYR-1 | Mvan_1972 | - | 6e-34 | 33.57% (286) | alpha/beta hydrolase fold |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2330c | - | 1e-07 | 30.00% (120) | hypothetical protein Mb2330c |
M. gilvum PYR-GCK | Mflv_3465 | - | 1e-120 | 67.20% (311) | peptidase S15 |
M. tuberculosis H37Rv | Rv2307c | - | 1e-07 | 30.00% (120) | hypothetical protein Rv2307c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2608 | - | 2e-34 | 34.98% (303) | putative hydrolase, alpha/beta fold |
M. marinum M | MMAR_0385 | - | 1e-42 | 36.81% (307) | hypothetical protein MMAR_0385 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_4450 | - | 9e-39 | 33.23% (319) | alpha/beta hydrolase |
M. thermoresistible (build 8) | TH_4007 | - | 5e-50 | 41.37% (307) | PUTATIVE alpha/beta hydrolase fold |
M. ulcerans Agy99 | MUL_1035 | - | 2e-41 | 36.66% (311) | hypothetical protein MUL_1035 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1417|M.vanbaalenii_PYR-1 MGVG--FTTRQVSFSSGGSRIAAELY--LPAG-PGPYPAVVFAHGFSGTM Mflv_3465|M.gilvum_PYR-GCK MTAG--WTTSAVSFPCDGEQIAGVLY--RPEGGAPPFPCVVFAHGFSGTM TH_4007|M.thermoresistible__bu -------VSTPVTFPAGGETCVGRLYGDAPGPADARKPCVVLCHGFGGTQ MMAR_0385|M.marinum_M MTQ-----RQDVRFPCGEAMISAWLYRPAGADPARPVPMLVMAHGLGAVR MUL_1035|M.ulcerans_Agy99 MTQ-----RQDVRFPCGEALISAWLYRPAGADPARPVPMLVMAHGLGAVR MSMEG_4450|M.smegmatis_MC2_155 MAQPLSYTRDDVTFMSDGTSCAAWLYRPDGVNNP---PIVVLAHGFAAFR MAB_2608|M.abscessus_ATCC_1997 MNR------QSIRFNSHGIDCEAWLYRAQTVEDT--APIVVMAHGVGGTK Mb2330c|M.bovis_AF2122/97 ----------------------------MSLKRCRALPVVAIVALVASGV Rv2307c|M.tuberculosis_H37Rv ----------------------------MSLKRCRALPVVAIVALVASGV * :.: ... Mvan_1417|M.vanbaalenii_PYR-1 DW-ILPDFASVFAAGGLAVLLFDYRHFGSSEGQPRQLVDTGCQLEDIRAA Mflv_3465|M.gilvum_PYR-GCK DW-ILPDFAAVFCAAGLAVLTFDYRGFGSSEGTPRQIVNSARQLEDIRAA TH_4007|M.thermoresistible__bu DTPAFTATARDFVRAGYLALTLDYRRFGESSGLPRQLVNIADQLDDIAAA MMAR_0385|M.marinum_M TM-RLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAA MUL_1035|M.ulcerans_Agy99 TM-RLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAA MSMEG_4450|M.smegmatis_MC2_155 EL-RLDAYAARFAQAGYAALVFDYRHWGASDGQPRRILDIPKQQTDWRAA MAB_2608|M.abscessus_ATCC_1997 DS-GLEPFAVRLAEAGMHALAFDYRGFGASDGFPRQHVSFTHQIGDYHAA Mb2330c|M.bovis_AF2122/97 ITFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGG Rv2307c|M.tuberculosis_H37Rv IMFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGG : . : . : : * .. Mvan_1417|M.vanbaalenii_PYR-1 LAYARAHEAIDARRIGLWGTSLGGSHVINVASADPRIAAVVATVPALDMY Mflv_3465|M.gilvum_PYR-GCK LDVVRNRADVDPGRIGLWGTSLGGSHVLQIAAEDPRVAAVVANVPALDMY TH_4007|M.thermoresistible__bu VGHARTHPGVDPDRIVLWGTSLGGGHVVTAAARDPRIAAVIAQIP----Y MMAR_0385|M.marinum_M VAYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCP---FT MUL_1035|M.ulcerans_Agy99 VAYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCP---FT MSMEG_4450|M.smegmatis_MC2_155 IAYARSLDNVDTTRLVGWGSSFGGGHVLTLAARDHEFAAAIVQVP---HV MAB_2608|M.abscessus_ATCC_1997 VNMARRLPGVDPTRIVLWGVSLAGGHVMAVAGARNDVAAVIALTP---LV Mb2330c|M.bovis_AF2122/97 WYFPHTSGGSGPAVLVCNGNAGDRSMRAELAVALHGLGLSVLLFD----Y Rv2307c|M.tuberculosis_H37Rv WYFPHTSGGSGPAVLVCNGNAGDRSMRAELAVALHGLGLSVLLFD----Y : . : * : . * .. : Mvan_1417|M.vanbaalenii_PYR-1 VGLRGRHRPATFRPGPARTVIATLRLVGAAALDAIRGRCGLRPYYLPVYG Mflv_3465|M.gilvum_PYR-GCK TGLRGRHRSPDYRPGPAQIVVAVARLLSAAVVDEVRGRLGRSPRYLPVYG TH_4007|M.thermoresistible__bu NGFP--------RKVEGRSTAATLRLLAVMVRDATRGALGLSPVYIKQVG MMAR_0385|M.marinum_M DGIAS---------VLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAG MUL_1035|M.ulcerans_Agy99 DGIAS---------VLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAG MSMEG_4450|M.smegmatis_MC2_155 SGPAS---------AFSQSPKLVARLIAAGLRDQIGAWFGGAPHRVTSIG MAB_2608|M.abscessus_ATCC_1997 DGIAA---------ARSAMTEHSAGTLLRSAVTGLRSRLGRQQRTIPIVG Mb2330c|M.bovis_AF2122/97 RGYGG---------NPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFG Rv2307c|M.tuberculosis_H37Rv RGYGG---------NPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFG * . . . : * Mvan_1417|M.vanbaalenii_PYR-1 PLGHAVFSDPALAERFRHVESN---------SPTWRNEVTPRFLFHAPRY Mflv_3465|M.gilvum_PYR-GCK RLGRAFFADPALAQRFRAVEAQ---------APSWRNAVAPRFLLHAPRY TH_4007|M.thermoresistible__bu PAGETAVIAGARAQQTVDAMT----------SATWRNEVAPRSLWDMWRY MMAR_0385|M.marinum_M KPGEVALMTAPDAYP---GYLG-----LMPQGTQVPNEVAARIGIKVLGY MUL_1035|M.ulcerans_Agy99 KPGEVALMTAPDAYP---GYLG-----LMPQGTQVPNEVAARIGIKVLGY MSMEG_4450|M.smegmatis_MC2_155 RPGEFAMMTSPGAYELVEEMAGGEAAEHMRAQLEAENDVAARIALRVPLY MAB_2608|M.abscessus_ATCC_1997 RAGELAALTSDGYYEAHLAIAG----------PAWRNEIDATVGTQLVSY Mb2330c|M.bovis_AF2122/97 ESLGAAVAVGLAVQRPPAALVLRSPFTSLAEVGAVHYPWLPLRRLLLDHY Rv2307c|M.tuberculosis_H37Rv ESLGAAVAVGLAVQRPPAALVLRSPFTSLAEVGAVHYPWLPLRRLLLDHY . * Mvan_1417|M.vanbaalenii_PYR-1 RDGTVER-IRCPVLVTLARDDAEVSSPYVRRKLGHAADV----EIMEYPV Mflv_3465|M.gilvum_PYR-GCK RDGTIER-VRCPVLVTLARDDAEVSTPFVERKVRRGRDV----EIRKYPA TH_4007|M.thermoresistible__bu RPGAHASFVRAPLLVCLGANDAETPAEKAAELARRAPRG----ELRTYDH MMAR_0385|M.marinum_M RPGRSARKIACPILFCVCETDSVAPAGPTLRYAARAPRG----EVIRYPE MUL_1035|M.ulcerans_Agy99 RPGRSARKIACPILFCVCETDSVAPAGPTLRYAARAPRGEVSGEVIRYPE MSMEG_4450|M.smegmatis_MC2_155 SPGRHAAKITAPTLVQLATKDDVTPYAKARKIVARIPNG----EVRSYDI MAB_2608|M.abscessus_ATCC_1997 RPTRCASRIGCPILVQIADFDRAAPPHAAAKAAFKARAE-----VRHYPC Mb2330c|M.bovis_AF2122/97 PSIERIASVHAPVLVIAGGSDDIVPATLSEWLVAAAAEPKRYVVVPGVGH Rv2307c|M.tuberculosis_H37Rv PSIERIASVHAPVLVIAGGSDDIVPATLSERLVAAAAEPKRYVVVPGVGH : .* *. * .. : Mvan_1417|M.vanbaalenii_PYR-1 AHFDVYHG-PVRAEIARDQRDFLVRHLLRGPNRATNSSGCGR Mflv_3465|M.gilvum_PYR-GCK GHFDMYHG-AVRDEVARDQREFLIRHLQ--PDRAARKDR--- TH_4007|M.thermoresistible__bu AHFEFDRD-DVRRRVTADQLAFLARVLPR------------- MMAR_0385|M.marinum_M GHFAIYLG-DAFERVVADQLGFLDKHLKPAGQP--------- MUL_1035|M.ulcerans_Agy99 GHFAIYLG-DAFEHVVADQLGFLDKHLKPAGQP--------- MSMEG_4450|M.smegmatis_MC2_155 THFEPYVD-PHFEQIVTDQIDFLNRHVG-AGTR--------- MAB_2608|M.abscessus_ATCC_1997 DHFGVYHGQECHELVIGHQISFLSRHLSIEAVSHTEALHG-- Mb2330c|M.bovis_AF2122/97 NDPELLDG----RVMLDAIRRFLTETAVLGQ----------- Rv2307c|M.tuberculosis_H37Rv NDPELLDG----RVMLDAIRRFLTETAVLGQ----------- . . : ** .