For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2570 | - | - | 100% (297) | alpha/beta hydrolase fold |
M. thermoresistible (build 8) | TH_1408 | - | 9e-65 | 45.42% (295) | alpha/beta hydrolase |
M. thermoresistible (build 8) | TH_2707 | - | 5e-57 | 44.82% (299) | PUTATIVE putative alpha/beta hydrolase fold |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2330c | - | 7e-10 | 30.71% (127) | hypothetical protein Mb2330c |
M. gilvum PYR-GCK | Mflv_3976 | - | 1e-121 | 70.21% (292) | dienelactone hydrolase |
M. tuberculosis H37Rv | Rv2307c | - | 7e-10 | 30.71% (127) | hypothetical protein Rv2307c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2608 | - | 2e-52 | 40.74% (297) | putative hydrolase, alpha/beta fold |
M. marinum M | MMAR_0385 | - | 6e-73 | 49.14% (291) | hypothetical protein MMAR_0385 |
M. avium 104 | MAV_2688 | - | 7e-08 | 38.33% (60) | alpha/beta hydrolase |
M. smegmatis MC2 155 | MSMEG_4450 | - | 4e-63 | 43.46% (306) | alpha/beta hydrolase |
M. ulcerans Agy99 | MUL_1035 | - | 3e-71 | 48.47% (295) | hypothetical protein MUL_1035 |
M. vanbaalenii PYR-1 | Mvan_2419 | - | 1e-122 | 69.90% (289) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3976|M.gilvum_PYR-GCK -----MPTRDDVRIPAHGDEIAAYVYRPPAGVGA--TACVVMAHGFTGTR Mvan_2419|M.vanbaalenii_PYR-1 ------MTRQEVQIPADGGQIAAYVYRPQVTGGG--TACIVMAHGFTGTR TH_2570|M.thermoresistible__bu ---MATTDRRDLRIPAHGEQLAAYFYPPAGAGPT--TPCIVMAHGFTATR MMAR_0385|M.marinum_M -----MTQRQDVRFPCGEAMISAWLYRPAGADPARPVPMLVMAHGLGAVR MUL_1035|M.ulcerans_Agy99 -----MTQRQDVRFPCGEALISAWLYRPAGADPARPVPMLVMAHGLGAVR MAV_2688|M.avium_104 -------------------------------------------------- MAB_2608|M.abscessus_ATCC_1997 ------MNRQSIRFNSHGIDCEAWLYRAQTVEDT--APIVVMAHGVGGTK MSMEG_4450|M.smegmatis_MC2_155 MAQPLSYTRDDVTFMSDGTSCAAWLYRPDGVNNP---PIVVLAHGFAAFR Mb2330c|M.bovis_AF2122/97 ---MSLKRCRALPVVAIVALVASGVITFIWSQQR--RLIYFPSAGPVPSA Rv2307c|M.tuberculosis_H37Rv ---MSLKRCRALPVVAIVALVASGVIMFIWSQQR--RLIYFPSAGPVPSA Mflv_3976|M.gilvum_PYR-GCK DDGLPDYAEAFRDAGYVVVLFDYRHFGASSGQPRQLLDMARQREDFHTVI Mvan_2419|M.vanbaalenii_PYR-1 DDGLPDYAEAFCAAGHTVVLFDYRHFGASTGEPRQLLDIAEQRRDYHTVI TH_2570|M.thermoresistible__bu DDGLPAYAEAFHAAGYAVVLFDYRHFGASTGEPRQLLDITRQHDDYRAVV MMAR_0385|M.marinum_M TMRLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAAV MUL_1035|M.ulcerans_Agy99 TMRLDAYAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAAV MAV_2688|M.avium_104 -------------------------------------------------- MAB_2608|M.abscessus_ATCC_1997 DSGLEPFAVRLAEAGMHALAFDYRGFGASDGFPRQHVSFTHQIGDYHAAV MSMEG_4450|M.smegmatis_MC2_155 ELRLDAYAARFAQAGYAALVFDYRHWGASDGQPRRILDIPKQQTDWRAAI Mb2330c|M.bovis_AF2122/97 SSVLPAGRDVVVETQDGMRLGGWYFPHTSGGSGPAVLVCNGNAGDRSMRA Rv2307c|M.tuberculosis_H37Rv SSVLPAGRDVVVETQDGMRLGGWYFPHTSGGSGPAVLVCNGNAGDRSMRA Mflv_3976|M.gilvum_PYR-GCK EWARRLDGVDPNRIVAWGSSFSGGHVLAVAAEDPRLAAVIAQAPFTDALA Mvan_2419|M.vanbaalenii_PYR-1 AWARHLDGVDPNRIVVWGSSFSGGHVLAVAAEDPRIAAVIAQAPFTDALA TH_2570|M.thermoresistible__bu AWARTQPGVDPDRIVLWGSSFSGGHVLVVAADDPRIAAVISQAPFTDAVP MMAR_0385|M.marinum_M AYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCPFTDGIA MUL_1035|M.ulcerans_Agy99 AYARTCDGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCPFTDGIA MAV_2688|M.avium_104 -------------------------------------------------- MAB_2608|M.abscessus_ATCC_1997 NMARRLPGVDPTRIVLWGVSLAGGHVMAVAGARNDVAAVIALTPLVDGIA MSMEG_4450|M.smegmatis_MC2_155 AYARSLDNVDTTRLVGWGSSFGGGHVLTLAARDHEFAAAIVQVPHVSGPA Mb2330c|M.bovis_AF2122/97 ELAVALHGLGLSVLLFDYRGYGG--NPGRPSEQGLAADARAAQEWLSGQS Rv2307c|M.tuberculosis_H37Rv ELAVALHGLGLSVLLFDYRGYGG--NPGRPSEQGLAADARAAQEWLSGQS Mflv_3976|M.gilvum_PYR-GCK TLRNAPLRNIPPMVVAALRDQLGAWRNRPPRMLAAVGPPGDLAALTSPDA Mvan_2419|M.vanbaalenii_PYR-1 TLREIPPGNIPLLLIAAVRDQVGAWRGRPPHTVAAVGSPGTVAALTSPDA TH_2570|M.thermoresistible__bu TLRKVPPATIARLAVAGLRDQIGSWRGRPPRTASAVGAPGAVAAMTTPDA MMAR_0385|M.marinum_M SVLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAGKPGEVALMTAPDA MUL_1035|M.ulcerans_Agy99 SVLAIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAGKPGEVALMTAPDA MAV_2688|M.avium_104 -------------------------------------------------- MAB_2608|M.abscessus_ATCC_1997 AARSAMTEHSAGTLLRSAVTGLRSRLGRQQRTIPIVGRAGELAALTSDGY MSMEG_4450|M.smegmatis_MC2_155 SAFSQSPKLVARLIAAGLRDQIGAWFGGAPHRVTSIGRPGEFAMMTSPGA Mb2330c|M.bovis_AF2122/97 DVDPARIAYFGESLGAAVAVGLAVQ--RPPAALVLRSPFTSLAEVG---- Rv2307c|M.tuberculosis_H37Rv DVDPARIAYFGESLGAAVAVGLAVQ--RPPAALVLRSPFTSLAEVG---- Mflv_3976|M.gilvum_PYR-GCK EPGFGAILGPES--------LWRNEFAARLMLRFAFERPGRKAATLQMPV Mvan_2419|M.vanbaalenii_PYR-1 KPGFEAIIGPNS--------LWRNEFAARLMFTFAFNRPGRKAAKLRMPV TH_2570|M.thermoresistible__bu EPGFRAIVEPDS--------LWRNEFAARLMLRFPFYRPVRVAGRINAPL MMAR_0385|M.marinum_M YPGYLGLMPQGT--------QVPNEVAARIGIKVLGYRPGRSARKIACPI MUL_1035|M.ulcerans_Agy99 YPGYLGLMPQGT--------QVPNEVAARIGIKVLGYRPGRSARKIACPI MAV_2688|M.avium_104 ---------------------------------------------MSCPI MAB_2608|M.abscessus_ATCC_1997 YEAHLAIAGP----------AWRNEIDATVGTQLVSYRPTRCASRIGCPI MSMEG_4450|M.smegmatis_MC2_155 YELVEEMAGGEAAEHMRAQLEAENDVAARIALRVPLYSPGRHAAKITAPT Mb2330c|M.bovis_AF2122/97 --------------------AVHYPWLPLRRLLLDHYPSIERIASVHAPV Rv2307c|M.tuberculosis_H37Rv --------------------AVHYPWLPLRRLLLDHYPSIERIASVHAPV : * Mflv_3976|M.gilvum_PYR-GCK LFCVCDDDVVTPPGPTIEAARRAPCG----ELRRYPYGHFDIYHD----P Mvan_2419|M.vanbaalenii_PYR-1 LLCVCDDDVVTPPGPSVEAAHRAPRG----ELCRYPYGHFDIYHD----P TH_2570|M.thermoresistible__bu LVCVCDDDAVTPPEPAIEAARRAPRG----QLRRYPYGHFDIYHD----P MMAR_0385|M.marinum_M LFCVCETDSVAPAGPTLRYAARAPRG----EVIRYPEGHFAIYLG-DAFE MUL_1035|M.ulcerans_Agy99 LFCVCETDSVAPAGPTLRYAARAPRGEVSGEVIRYPEGHFAIYLG-DAFE MAV_2688|M.avium_104 LFAICENDTVAPAKATQKYAAQAPRG----EIKLYDAGHFDIYVG-ADFE MAB_2608|M.abscessus_ATCC_1997 LVQIADFDRAAPPHAAAK-AAFKARA----EVRHYPCDHFGVYHGQECHE MSMEG_4450|M.smegmatis_MC2_155 LVQLATKDDVTPYAKARKIVARIPNG----EVRSYDITHFEPYVD-PHFE Mb2330c|M.bovis_AF2122/97 LVIAGGSDDIVPATLSEWLVAAAAEPKRYVVVPGVGHNDPELLDG----R Rv2307c|M.tuberculosis_H37Rv LVIAGGSDDIVPATLSERLVAAAAEPKRYVVVPGVGHNDPELLDG----R *. * .* : . . : . . Mflv_3976|M.gilvum_PYR-GCK QVKADQLEFLHRALARGGR-------- Mvan_2419|M.vanbaalenii_PYR-1 KVKADQLEFLARVVGDRTA-------- TH_2570|M.thermoresistible__bu QVKSDQLDFLRQVLGTG---------- MMAR_0385|M.marinum_M RVVADQLGFLDKHLKPAGQP------- MUL_1035|M.ulcerans_Agy99 HVVADQLGFLDKHLKPAGQP------- MAV_2688|M.avium_104 RNVTDQLNFLSRHVPVS---------- MAB_2608|M.abscessus_ATCC_1997 LVIGHQISFLSRHLSIEAVSHTEALHG MSMEG_4450|M.smegmatis_MC2_155 QIVTDQIDFLNRHVGAGTR-------- Mb2330c|M.bovis_AF2122/97 VMLDAIRRFLTETAVLGQ--------- Rv2307c|M.tuberculosis_H37Rv VMLDAIRRFLTETAVLGQ--------- ** .