For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNLRKNVIRSVLRGARPLFASRRLGIAGRRVLLATLTAGARAPKGTRFQRVSIAGVPVQRVQPPHAATSG TLIYLHGGAYALGSARGYRGLAAQLAAAAGMTALVPDYTRAPHAHYPVALEEMAAVYTRLLDDGLDPKTT VIAGDSAGGGLTLALAMALRDRGIQAPAALGLICPWADLAVDIEATRPALRDPLILPSMCTEWAPRYVGS SDPRLPGISPVYGDMSGLPPIVMQTAGDDPICVDADKIETACAASKTSIEHRRFAGMWHDFHLQVSLLPE ARDAIADLGARLRGHLHQSQGQPRGVVK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3084 | lipR | - | 100% (308) | PROBABLE ACETYL-HYDROLASE/ESTERASE LIPR |
M. tuberculosis H37Rv | Rv1076 | lipU | 2e-22 | 31.02% (274) | lipase LipU |
M. tuberculosis H37Rv | Rv3487c | lipF | 9e-18 | 28.45% (239) | esterase/lipase LipF |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3111 | lipR | 1e-177 | 100.00% (308) | acetyl-hydrolase/esterase LipR |
M. gilvum PYR-GCK | Mflv_4606 | - | 8e-25 | 31.44% (229) | alpha/beta hydrolase domain-containing protein |
M. leprae Br4923 | MLBr_00314 | - | 4e-21 | 31.75% (274) | putative esterase |
M. abscessus ATCC 19977 | MAB_0141c | - | 2e-33 | 34.93% (229) | putative esterase |
M. marinum M | MMAR_3137 | - | 2e-28 | 28.81% (302) | esterase/lipase |
M. avium 104 | MAV_3032 | - | 1e-25 | 31.02% (245) | alpha/beta hydrolase domain-containing protein |
M. smegmatis MC2 155 | MSMEG_3010 | - | 2e-32 | 31.56% (263) | acetyl-hydrolase |
M. thermoresistible (build 8) | TH_2573 | - | 2e-21 | 35.61% (205) | PUTATIVE Alpha/beta hydrolase fold-3 domain protein |
M. ulcerans Agy99 | MUL_2832 | lipU_1 | 4e-23 | 30.67% (238) | lipase LipU_1 |
M. vanbaalenii PYR-1 | Mvan_2672 | - | 2e-23 | 29.73% (259) | alpha/beta hydrolase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Rv3084|M.tuberculosis_H37Rv ------------------------------------------------MN Mb3111|M.bovis_AF2122/97 ------------------------------------------------MN Mflv_4606|M.gilvum_PYR-GCK ----------------------------------MS--SPARPNPSMASH MMAR_3137|M.marinum_M ----------------------------------MTNTDAADRRPSLASH MLBr_00314|M.leprae_Br4923 -----------------------------MAISAGAPVEIVESGPSIAAR MUL_2832|M.ulcerans_Agy99 MSGVTTFDKLFGPPYDAIRPRRNRRVGRRAASGHGAHVEVVESGPSIAAR MAV_3032|M.avium_104 ---------------------------------------------MTSPP Mvan_2672|M.vanbaalenii_PYR-1 ---------------------------------------------MTVNP TH_2573|M.thermoresistible__bu ------------------------------------------VARSSKLP MAB_0141c|M.abscessus_ATCC_199 ----------------MTDPAHKPTFGDTVTIETVGSDSAVQRSSHAVAR MSMEG_3010|M.smegmatis_MC2_155 ---------------------------MIQACVILRHHGNGLVTAHTLAP Rv3084|M.tuberculosis_H37Rv LRKNVIRSVLRGARPLFASRRLGIAGRRVLLATLTAGARAPKGTRFQRVS Mb3111|M.bovis_AF2122/97 LRKNVIRSVLRGARPLFASRRLGIAGRRVLLATLTAGARAPKGTRFQRVS Mflv_4606|M.gilvum_PYR-GCK LVAATARRVLRPLTQVIPANDHGFAVMDRVLRGTLVVSRPRRAISVEKVD MMAR_3137|M.marinum_M FVAMTSRNTLRPLSQLIPSSAHGLAVMDRVLRMALVGSRPRRSVAVRTID MLBr_00314|M.leprae_Br4923 LASLTSRLTIRPILAVGSYVPQLPWPFGLIDHAARVLLPVTNAARAEVNL MUL_2832|M.ulcerans_Agy99 VVSLASRLTVRPVIAVASHFPHLPWPWSLVDFALLPITWASGIIGERVSL MAV_3032|M.avium_104 LDPDAAARIASFGETAPMRQRGLP-AVRAGLESAPRPATMPEMASVTEAL Mvan_2672|M.vanbaalenii_PYR-1 ATLDAVLQKVLEAVPFKLTTEGGPEPARQRFKELPRNAILPEVA-AQDLS TH_2573|M.thermoresistible__bu LDFHPDLRRLARFIPRQAVSPVTLPLMRLATRPMTRRAPR-------DIE MAB_0141c|M.abscessus_ATCC_199 ALLRPTLELLARIAARHPTARTHGFRAANFIELAAYPLRPSRDTRRRIVM MSMEG_3010|M.smegmatis_MC2_155 MSINQPNDPLGVIYAEWTEEFVANPDMSLRLMRWVFEDWQRVTSEPEDVT Rv3084|M.tuberculosis_H37Rv IAG----VPVQRVQPPHAATSG-TLIYLHGGAYALGSARGYRGLAAQLAA Mb3111|M.bovis_AF2122/97 IAG----VPVQRVQPPHAATSG-TLIYLHGGAYALGSARGYRGLAAQLAA Mflv_4606|M.gilvum_PYR-GCK TPFAGERVRGDWVKAANVASDAPPILYIHGGAFSMCSPETHRGLISELSA MMAR_3137|M.marinum_M TEFAGNQIRGDWITSPAVDPHAVPLLYIHGGAYSMCSPATHRGLLGELAS MLBr_00314|M.leprae_Br4923 SNTSAQLVRAAGVRPA--DGSGRIVLYLHGGAFLGCGANSHRRLVETLSK MUL_2832|M.ulcerans_Agy99 PNASGHLVRASGVPPP--DGSRRVVLYMHGGAFLKGGIHSHARLAGTLSK MAV_3032|M.avium_104 VPSAAGGIPVRIYRPTTD-SGVAVLVYLHGGGLVMGSNRSFEPLARELAS Mvan_2672|M.vanbaalenii_PYR-1 IEGPAGPVPVRIYRPPSDEAAPPTVVFIHGGGWTVGDLDSYDGTARLHAA TH_2573|M.thermoresistible__bu VLTLSSGIGIRLFRPPGG-GTGAAMLWIHGGGYVIGCAAQDDALCRRYAR MAB_0141c|M.abscessus_ATCC_199 FEQFRAEWLWHKDLPDPDQAAQGAILYFHGGAFILGGLHSHRRMAARLAR MSMEG_3010|M.smegmatis_MC2_155 YASTRIGGVPGILVKPLDADPGQMLVVLHGGGFALGSSASHRKLAGHLAR :: :***. : Rv3084|M.tuberculosis_H37Rv AAGMTALVPDYTRAPHAHYPVALEEMAAVYTRLLDDG----LDPKTTVIA Mb3111|M.bovis_AF2122/97 AAGMTALVPDYTRAPHAHYPVALEEMAAVYTRLLDDG----LDPKTTVIA Mflv_4606|M.gilvum_PYR-GCK AARRPVFAVRYRLVPRYPFPAAADDALIAYRWLTEGSA-ITASSGTVALA MMAR_3137|M.marinum_M ASGRPIFAVRYRLAPRYPFPAAADDALNAYRWLVTGQP-SASGERGVAVA MLBr_00314|M.leprae_Br4923 LADSPILVVNYRLLPKHSIGMALDDCHDGYQWLRRLG----YDPEQIVLA MUL_2832|M.ulcerans_Agy99 FADSPLLVVNYRLVPKHTVGMALEDCHDAYLWLRLRG----HAPEQIVLA MAV_3032|M.avium_104 ASAATVVAVDYRLAPESPPPAQFDDAYAATEWVSRKAGELGVDADRLAVI Mvan_2672|M.vanbaalenii_PYR-1 GAGAVVVSVDYRLAPEHPYPAAVDDVWAATRWVAENAAELGADPDRLAVA TH_2573|M.thermoresistible__bu ELDVTVAAVDYRLAPENPYPIPLEDCYAALLWLTRLP---TVDPQRVVIA MAB_0141c|M.abscessus_ATCC_199 ASGIPVLVVDYRQLPLAHITDSITDAVDSYRYLLDRG----YAPGKIVFA MSMEG_3010|M.smegmatis_MC2_155 AFGAHAFVADFRLAPEHPYPAQIDDATAVFTSLLDNG----IDASSITFV : * : : .. Rv3084|M.tuberculosis_H37Rv GDSAGGGLTLALAMALRDRGIQAPAALGLICPWADLAVDIEATRPALR-D Mb3111|M.bovis_AF2122/97 GDSAGGGLTLALAMALRDRGIQAPAALGLICPWADLAVDIEATRPALR-D Mflv_4606|M.gilvum_PYR-GCK GDSAGGQLAAATALGAREHRLPTPDAMLLMSPVLDLTCQLAMDRDLRRRD MMAR_3137|M.marinum_M GDSAGGQLTMATALGARSDGLPLPDSMLLMSPVLDLTCELARARELRRRD MLBr_00314|M.leprae_Br4923 GDSAGGYLALALAQRLQDVGE-EPAALVAISPLLQLAKKGKQAHPNAKTD MUL_2832|M.ulcerans_Agy99 GDSAGGYLAFALAQRLRARGE-EPAALVAISPLLQLAMRSKKAHPNIKSD MAV_3032|M.avium_104 GDSAGGSLAAAVALAARDRRGPPICAQVLLYPGLDRDMSVASIAAMPD-A Mvan_2672|M.vanbaalenii_PYR-1 GDSAGGNLAAVVAQSARD-AGIPLRFQLLWYPSTTFDTSLPSFVENAQ-A TH_2573|M.thermoresistible__bu GGSAGGGLAAALALLARDRGEVAPVAQLLVYPMLDDRTLHRTDLDHPG-L MAB_0141c|M.abscessus_ATCC_199 GDSAGGGLAFSAALAARDEGLPVPGGIAAISPWADLDCSAKRAHPNEAHD MSMEG_3010|M.smegmatis_MC2_155 GDSAGASIAVATTLRLLRDGAPVPGRVITISPWLDMENSGSTIESNDATD *.***. :: : * Rv3084|M.tuberculosis_H37Rv PLILPSMCTEWAPRYVGSSDP------RLPGISPVYGDMSGLPPIVMQTA Mb3111|M.bovis_AF2122/97 PLILPSMCTEWAPRYVGSSDP------RLPGISPVYGDMSGLPPIVMQTA Mflv_4606|M.gilvum_PYR-GCK PFASAISASRTIGLYVAGADP------ADPRISVLDADLTDMPPTLIQVG MMAR_3137|M.marinum_M PFASARSAARALDLYVAGADH------RNERISVLDADLRSMPPILIQVG MLBr_00314|M.leprae_Br4923 AMFPPKAFDALGRLVASSAAKNKVDDKPEELYEPLDHIAPGLPRTLIHVS MUL_2832|M.ulcerans_Agy99 AMFPARAFDALVAIVAGAAARNETAGRREEIYEPLEHIAPGLPPTLIHVS MAV_3032|M.avium_104 PLLIRDDIDYMHALVDGDAGPPT----DPYLVPAYAADLSGLPPAIVVTA Mvan_2672|M.vanbaalenii_PYR-1 PILDLAACKGFTRWYIGDTDLSE----PPVTLVPARGNLAGLPPAYIAVA TH_2573|M.thermoresistible__bu RLWNQSSNRFGWSAYLGDADP-------EVAVPARQTDLAGLPPAWIGVG MAB_0141c|M.abscessus_ATCC_199 AMLSGFILSVPGELGMARGNG------LDPAWSAVNHDFHGMPAIFIQVG MSMEG_3010|M.smegmatis_MC2_155 FLITREGLQGNIDRYLSGGASP-----TDPLVNPLYADFTGFPRLYITVS : . .:* : .. Rv3084|M.tuberculosis_H37Rv GDDPICVDADKIETACAASKTSIEHRRFAGMWHDFHLQVSLLPEARDAIA Mb3111|M.bovis_AF2122/97 GDDPICVDADKIETACAASKTSIEHRRFAGMWHDFHLQVSLLPEARDAIA Mflv_4606|M.gilvum_PYR-GCK GREMLLDDSRVFAKRLQTAGVSSQLQVFRGQIHVFQAMFRLLPEAREALR MMAR_3137|M.marinum_M GREMLIDDSRHLADRLRSAGSSVEIQVYRGQIHVFQAMFRILPEAREAIH MLBr_00314|M.leprae_Br4923 GSEVLLHDAQLAATKLAAVGVPAEIRVWPGQVHVFQAAAPMVPEATLSLR MUL_2832|M.ulcerans_Agy99 GAEALLHDARLAAGKLAAAGVRAEVRVWPGQLHDFQVAAPMLPEATYSLR MAV_3032|M.avium_104 GCDPIRDWGERYADRLRDAGVQTTVTRYPGMYHGFLMRSDATARGRLAIA Mvan_2672|M.vanbaalenii_PYR-1 GHDPLRDDGLRYGELLTAAGVPVELHHAESLVHGYLGYAGIVPAATEATE TH_2573|M.thermoresistible__bu TYDLFHDEDLAYAERLRAAGVPCEVEVVPGAFHGFDAIAPRAGVSRQFFD MAB_0141c|M.abscessus_ATCC_199 SLEVLRVDVDLLARRCAEAHVPCTVQVWKHAIHDFQLGADLLPDARAAVG MSMEG_3010|M.smegmatis_MC2_155 DTESLYADATRLAEKARAAGVDVTFEVASGQQHVFPLQAGVLPEADAAIE : : * : . Rv3084|M.tuberculosis_H37Rv DLGARLRGHLHQSQGQPRGVVK------- Mb3111|M.bovis_AF2122/97 DLGARLRGHLHQSQGQPRGVVK------- Mflv_4606|M.gilvum_PYR-GCK LGGEFLATSATVR---------------- MMAR_3137|M.marinum_M RAGNFLKASAHR----------------- MLBr_00314|M.leprae_Br4923 QISQYIREATASKASRDRQSL-------- MUL_2832|M.ulcerans_Agy99 QIGEYIRQATG------------------ MAV_3032|M.avium_104 EIGGLLRAKFTHPLRFDVPITGRHSTPTR Mvan_2672|M.vanbaalenii_PYR-1 RGLAALRAALA------------------ TH_2573|M.thermoresistible__bu SQCAMLRGLLRPEAA-------------- MAB_0141c|M.abscessus_ATCC_199 DMAHFIYRITDPDNLKAGTP--------- MSMEG_3010|M.smegmatis_MC2_155 SMAAWYRSAKPLAV---------------