For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSRIRALALRDALLDEGSFVSWDGPPLAVPTSAEYRRELAEAEAATGLDESVLTGEGRVFGRRVALIACE FDFLAGSIGVAAAERIIAAVQKATAERLPLLASPSSGGTRMQEGTVAFLQMVKIAAAVELHKKAHLPYLV YLRHPTTGGVFASWGSLGHVTAAEPGALIGFLGPRVYEHLYGEPFPAGIQTAENLHRHGVVDAVIPPGIL RATLDRALRVVSDAPDVPPAAPDAEPLPDVPAWESVEISRRPDRPGVSALLRYGTTDRVLLSGTGQGEAA TTLLALARFGGQPAVVLGQQRVVGGLVGPAALREARRGMALAAGLKLPLVLVIDTAGPALSTEAEEGGLA GEIARCLAELVTLDTPTVSVLLGQGSGGPALAMVPADRVLAALHGWLAPLPPEGASAIVFRDVDHAPELA AAQGIRSADLLRNGIVDAIVPEHPDAADEPQAFTQRLSATIAVELHRLRTVPDEQRLAARLERYRRIGLP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4993 | - | - | 100% (490) | carboxyl transferase |
M. vanbaalenii PYR-1 | Mvan_1677 | - | 1e-14 | 24.52% (420) | carboxyl transferase |
M. vanbaalenii PYR-1 | Mvan_5639 | - | 5e-14 | 23.67% (469) | carboxyl transferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0928c | accD3 | 0.0 | 78.50% (493) | putative acetyl-coenzyme A carboxylase carboxyl transferase |
M. gilvum PYR-GCK | Mflv_1754 | - | 0.0 | 87.53% (489) | carboxyl transferase |
M. tuberculosis H37Rv | Rv0904c | accD3 | 0.0 | 78.50% (493) | putative acetyl-coenzyme A carboxylase carboxyl transferase |
M. leprae Br4923 | MLBr_00102 | accD4 | 3e-14 | 22.20% (428) | putative acyl CoA carboxylase beta subunit |
M. abscessus ATCC 19977 | MAB_0181 | - | 1e-14 | 24.17% (422) | propionyl-CoA carboxylase, beta subunit (PccB) |
M. marinum M | MMAR_4626 | accD3 | 0.0 | 79.59% (490) | acetyl-coenzyme A carboxylase carboxyl transferase (subunit |
M. avium 104 | MAV_2190 | - | 1e-14 | 23.77% (408) | propionyl-CoA carboxylase beta chain |
M. smegmatis MC2 155 | MSMEG_5642 | - | 0.0 | 83.64% (489) | acetyl-coenzyme a carboxylase carboxyl transferase |
M. thermoresistible (build 8) | TH_0091 | accD3 | 0.0 | 79.84% (491) | PUTATIVE ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE |
M. ulcerans Agy99 | MUL_0237 | accD3 | 0.0 | 78.78% (490) | acetyl-coenzyme a carboxylase carboxyl transferase (subunit |
CLUSTAL 2.0.9 multiple sequence alignment Mb0928c|M.bovis_AF2122/97 ---------------MSRITTDQLRHAVLDRGSFVSWDSEPLAVPVADSY Rv0904c|M.tuberculosis_H37Rv ---------------MSRITTDQLRHAVLDRGSFVSWDSEPLAVPVADSY MMAR_4626|M.marinum_M ---------------MSRITTDQLRDAVLDEGSFISWDTPPLEVPISESY MUL_0237|M.ulcerans_Agy99 ---------------MSRITTDQLRDAVLDEDSFISWDTPPLEVPISESY Mvan_4993|M.vanbaalenii_PYR-1 ---------------MSRIRALALRDALLDEGSFVSWDGPPLAVPTSAEY Mflv_1754|M.gilvum_PYR-GCK ---------------MSRIGALALRDAVLDEGSFLSWDRPPIPVVTSAEY MSMEG_5642|M.smegmatis_MC2_155 ---------------MSRIGALALRDAVLDEGSFRSWDTAPLDVGADDEY TH_0091|M.thermoresistible__bu ---------------MSRIGAVQFVETVLDTGSFVSWDDPPLAIPADEDY MLBr_00102|M.leprae_Br4923 MIMKSTAEKLAELRVRLELANEPGGEKAAAKRDKKNIPSARARIYALVDP MAB_0181|M.abscessus_ATCC_1997 MPPHTTAEKLADLRERIALTREPGDAKAIARRDKKGIPSARARIDALLDK MAV_2190|M.avium_104 ----------------MTITAPETVGESLDPRD------PLLRLSNFFDD : . : . Mb0928c|M.bovis_AF2122/97 ARELAAARAATGADE-------SVQTGEGRVFGRRVAVVACEFDFLGGSI Rv0904c|M.tuberculosis_H37Rv ARELAAARAATGADE-------SVQTGEGRVFGRRVAVVACEFDFLGGSI MMAR_4626|M.marinum_M ARDLADARAATGRDE-------SVLTGEGRVLGRRVAVVVCEFDFLAGSI MUL_0237|M.ulcerans_Agy99 ARDLADVRAATGRDE-------SVLTGEGRVLGRRVAVVACEFDFLAGSI Mvan_4993|M.vanbaalenii_PYR-1 RRELAEAEAATGLDE-------SVLTGEGRVFGRRVALIACEFDFLAGSI Mflv_1754|M.gilvum_PYR-GCK RAELAAAADATGLDE-------SVVTGEGRVFGRRVALIACEFDFLAGSI MSMEG_5642|M.smegmatis_MC2_155 RRELAEASAKTGLDE-------SVLTGEGTVFGRRVAVVACEFDFLAGSI TH_0091|M.thermoresistible__bu RRELTDAAAVTGLDE-------AVLTGEGTIFGRRVALVACEFDFLAGSI MLBr_00102|M.leprae_Br4923 GTFLEIGALTRTPGDPNALYGDGVVTGHGLINGRQVGVFSHDQTVFGGTV MAB_0181|M.abscessus_ATCC_1997 GSFLELDAFARTPGDANAPYTDGVVTGLGRIDGRPVAVFSHDQTVYQGSV MAV_2190|M.avium_104 GSVALLHERDRS----------GVLAAAGTVNGVRTIAFCTDGTVMGGAM .* :. * : * . . : . *:: Mb0928c|M.bovis_AF2122/97 GVAAAERITAAVERATAERLPLLASPSSGGTRMQEGTVAFLQMVKIAAAI Rv0904c|M.tuberculosis_H37Rv GVAAAERITAAVERATAERLPLLASPSSGGTRMQEGTVAFLQMVKIAAAI MMAR_4626|M.marinum_M GVAAAERITAAVERATRQRLPLLASPSSGGTRMQEGTVAFLQMVKIAAAV MUL_0237|M.ulcerans_Agy99 GVAAAERITAAMERATSQRLPLLASPSSGGTRMQEGTVAFLQMVKIAAAV Mvan_4993|M.vanbaalenii_PYR-1 GVAAAERIIAAVQKATAERLPLLASPSSGGTRMQEGTVAFLQMVKIAAAV Mflv_1754|M.gilvum_PYR-GCK GVAAAERITAAVQRATAEGLPLLASPSSGGTRMQEGTVAFLQMVKIAAAV MSMEG_5642|M.smegmatis_MC2_155 GVAAAERITAAVQRATAERLPLLASPSSGGTRMQEGTVAFLQMVKIAAAV TH_0091|M.thermoresistible__bu GVAAAERIVAAVQRATAERLPLVASPSSGGTRMQEGTVAFLQMVKIAAAV MLBr_00102|M.leprae_Br4923 GEMFGRKVARLMEWCAMAGCPIVGINDSGGARIQDAVTSLAWYAELGRRH MAB_0181|M.abscessus_ATCC_1997 GEMFGRKVAKLMEWAATNGCPVIGINDSAGARIQDTATSLAWYAELGRRH MAV_2190|M.avium_104 GIEGCSHIVDAYDTAIEEQSPIVGIWHSGGARLAEGVKALHAVGLVFEAM * :: : . *::. *.*:*: : . :: : Mb0928c|M.bovis_AF2122/97 QLHNQARLPYLVYLRHPTTGGVFASWGSLGHLTVAEPGALIGFLGPRVYE Rv0904c|M.tuberculosis_H37Rv QLHNQARLPYLVYLRHPTTGGVFASWGSLGHLTVAEPGALIGFLGPRVYE MMAR_4626|M.marinum_M RLHKQAHLPYLVYLRHPTTGGVFASWGSLGHVTVAEPGALIGFLGPRVYE MUL_0237|M.ulcerans_Agy99 RLHKQAHLPYLVYLRHPTTGGVFASWGSLGHVTVAEPGALIGFLGPRVYE Mvan_4993|M.vanbaalenii_PYR-1 ELHKKAHLPYLVYLRHPTTGGVFASWGSLGHVTAAEPGALIGFLGPRVYE Mflv_1754|M.gilvum_PYR-GCK ELHKKGNLPYLVYLRHPTTGGVFASWGSLGHVTAAEPDALIGFLGPRVYE MSMEG_5642|M.smegmatis_MC2_155 ELHKQAHLPYLVYLRHPTTGGVFASWGSLGHVTAAEPGALIGFLGPRVYE TH_0091|M.thermoresistible__bu QLHKLAHLSYLVYLRHPTTGGVFASWGSLGHITIAEPNALIGFLGPRVYQ MLBr_00102|M.leprae_Br4923 ELLS-GIVPQISIVLGKCAGGAVYSPIQTDLVVAVRGQGYMFVTGPDVIK MAB_0181|M.abscessus_ATCC_1997 ELLR-GTVPEISIILGKCAGGAVYSPIQTDLLVAVRDQGYMFITGPDVIK MAV_2190|M.avium_104 IRAS-GYIPQISVVVGFAAGGAAYGPALTDVVVMAP-ESRVFVTGPDVVR . :. : : :**. . . :. . . : . ** * . Mb0928c|M.bovis_AF2122/97 LLYGDPFPSGVQTAENLRRHG--IIDGVVALDRLRPMLDRALTVLIDAPE Rv0904c|M.tuberculosis_H37Rv LLYGDPFPSGVQTAENLRRHG--IIDGVVALDRLRPMLDRALTVLIDAPE MMAR_4626|M.marinum_M LLYDEPFPAGIQTAENLQRHG--VIDGVVTLDELRRTLDRALTVLTDAPA MUL_0237|M.ulcerans_Agy99 LLYDEPFPAGVQTAENLQRHG--VIDGVVTLDELRRTLDRALTVLTDAPA Mvan_4993|M.vanbaalenii_PYR-1 HLYGEPFPAGIQTAENLHRHG--VVDAVIPPGILRATLDRALRVVSDAPD Mflv_1754|M.gilvum_PYR-GCK HLYGERFPSGVQTSENLQRHG--VIDAVVPLEVLRATVDRTLKVVADAPG MSMEG_5642|M.smegmatis_MC2_155 HLYGEPFPSGVQTAENLHAHG--VIDGVVPLALLRETLDRTLRVVADPPG TH_0091|M.thermoresistible__bu HLYGEPFPPGVQTAENLHRHG--VIDSVVPLPRLRSELDRALRVLVDEPG MLBr_00102|M.leprae_Br4923 DVTGEEVSLDELGGVDSQAKY-GNIHQVVESEAAAFGYVRDFLSFLPPN- MAB_0181|M.abscessus_ATCC_1997 DVTGEDVSFDELGGADVQAQR-GNIHKVVEDEAAAFQYVRDYLSFLPSN- MAV_2190|M.avium_104 SVTGEDVDMASLGGPETHHKKSGVCHIVADDELDAYERGRRLVGLFCQQG : .: . . : : : . * * . Mb0928c|M.bovis_AF2122/97 PLPAPQTPA--PVPDVPTWDSVVASRRPDRP----GVRQLLRHGATDRVL Rv0904c|M.tuberculosis_H37Rv PLPAPQTPA--PVPDVPTWDSVVASRRPDRP----GVRQLLRHGATDRVL MMAR_4626|M.marinum_M PAPAAPAPT--AIPDVPAWTSVLASRRPDRP----GVEHLLRYGATDRVL MUL_0237|M.ulcerans_Agy99 PAPAAPAPP--AIPDVAAWTSVLASRRPDRP----GVEHLLRYGATDRVL Mvan_4993|M.vanbaalenii_PYR-1 VPPAAPDAE--PLPDVPAWESVEISRRPDRP----GVSALLRYGTTDRVL Mflv_1754|M.gilvum_PYR-GCK PPPAAPEPE--VLPDIPAWDSVEISRRPDRP----GVSFLLRHGATERVL MSMEG_5642|M.smegmatis_MC2_155 PAPAVIETE--DLPDVPAWDSVIASRRPDRP----GVGFLLRHGATDQVL TH_0091|M.thermoresistible__bu TPPAPPDVDT-SQPDVPAWDSVIASRRPDRP----GVGYLLRHGATDTVL MLBr_00102|M.leprae_Br4923 CFDKAPIVNPGLEPEIMAHDLELDSIVPDSDNTAYDMREVLLRIFDDGH- MAB_0181|M.abscessus_ATCC_1997 TFDYPPIVNPGLEPEITEDDLYLDTFIPDSDNQGYDMMEILLRIFDDGD- MAV_2190|M.avium_104 HFDRT---------KAEAGDTDIHALLPESARRAYDVRPIVTAILDDETP . : *: .: :: : Mb0928c|M.bovis_AF2122/97 LSGTDQGEAATTLLALARFGGQPTVVLGQQRAVGGGGSTVGPAALREARR Rv0904c|M.tuberculosis_H37Rv LSGTDQGEAATTLLALARFGGQPTVVLGQQRAVGGGGSTVGPAALREARR MMAR_4626|M.marinum_M LSGTGYGDAATTLLALARMAGQPMVVLGQQ-GIGGG--IIGPASLREARR MUL_0237|M.ulcerans_Agy99 LSGTGYGDAATTLLALARMAGQPMVVLGQQ-GIGGG--IIGPASLREARR Mvan_4993|M.vanbaalenii_PYR-1 LSGTGQGEAATTLLALARFGGQPAVVLGQQRVVGGL---VGPAALREARR Mflv_1754|M.gilvum_PYR-GCK LSGTGQGESATMMLALARFGNQPAVVLGQQRVVGGL---VGPAALREARR MSMEG_5642|M.smegmatis_MC2_155 LSGTERGEAATTLLALARFGGQPAVVLGQRRIVGGL---VGPGALREARR TH_0091|M.thermoresistible__bu LSGSGGGEAATTLLALARFGGQPAVVLGQQRVIGAM---VGPAALREARR MLBr_00102|M.leprae_Br4923 FLDVAAQAGQAIITGYARVDGRTVGVVANQPMHLSG--AIDNEASDKAAR MAB_0181|M.abscessus_ATCC_1997 IFEISEQRGPAMITAFARVDGHPVGVIANQPLQMAG--AVDTDASDKAAS MAV_2190|M.avium_104 FDEFQANWAPSMVIGLGRLSGRTVGVLANNPLRLGG--CLNSESAEKAAR : . : : . .*. .:. *:.:. . :. : :* Mb0928c|M.bovis_AF2122/97 GMALAAELCLPLVLVIDAAGPALSAAAEQGGLAGQIAHCLAELVTLDTPT Rv0904c|M.tuberculosis_H37Rv GMALAAELCLPLVLVIDAAGPALSAAAEQGGLAGQIAHCLAELVTLDTPT MMAR_4626|M.marinum_M GMALAAELRLPLVLVIDTAGPALSADAEQGGLAGQIAQCLAELVTLGTPT MUL_0237|M.ulcerans_Agy99 GMALAAELRLPLVLVIDTAGPALSADAEQGGLAGQIAQCLAELVTLGTPT Mvan_4993|M.vanbaalenii_PYR-1 GMALAAGLKLPLVLVIDTAGPALSTEAEEGGLAGEIARCLAELVTLDTPT Mflv_1754|M.gilvum_PYR-GCK GMALAASLKLPLVLVIDTAGPALSTEAEEGGLAGEIARCLAELVTLDTPT MSMEG_5642|M.smegmatis_MC2_155 GMALAAGLQLPLVLVIDTAGPALSTEAEQGGLAGEIARCLAELVTLDTPT TH_0091|M.thermoresistible__bu GMALAADLQLPLVLVIDTAGPALTAEAEQGGLASEIAHCLAELVTLDTAT MLBr_00102|M.leprae_Br4923 FIRFCDAFNIPLVFVVDTPGFLPGVEQEKNGIIKRGGRFLYAVVEADVPK MAB_0181|M.abscessus_ATCC_1997 FIRFCDAYNLPLVFVVDTPGALPGVSEEKNGIIKKGGRFFNAVVEADVPK MAV_2190|M.avium_104 FVRLCDAFGIPLVVIVDVPGYLPGVDQEWGGVVRRGAKLLHAFGEATVPR : :. :***.::*..* . * .*: . .: : . .. Mb0928c|M.bovis_AF2122/97 VSILLGQGSGGPALAMLP----ADRVLAALHGWLAPLPPEGASAIVFRDT Rv0904c|M.tuberculosis_H37Rv VSILLGQGSGGPALAMLP----ADRVLAALHGWLAPLPPEGASAIVFRDT MMAR_4626|M.marinum_M VSVLLGQGSGGPALAMVP----ADRVLAAQHGWLAPLPPEGASAIVFRDT MUL_0237|M.ulcerans_Agy99 VSVLLGQGSGGPALAMVP----ADRVLAAQHGWLAPLPPEGASAIVFRDT Mvan_4993|M.vanbaalenii_PYR-1 VSVLLGQGSGGPALAMVP----ADRVLAALHGWLAPLPPEGASAIVFRDV Mflv_1754|M.gilvum_PYR-GCK VSVLLGQGSGGPALAMVP----ADRVLAALHGWLAPLPPEGASAIVFRDV MSMEG_5642|M.smegmatis_MC2_155 VSVLMGQGSGGPALAMVP----ADRVLAASNGWLAPLPPEGASAIVYRDT TH_0091|M.thermoresistible__bu LSVLLGQGSGGPALAMVP----ADRVLAARHGWLAPLPPEGVSAIVHRDL MLBr_00102|M.leprae_Br4923 VTITIRKSYGGAYAVMGSKQLAADLNFAWPTARIAVIGADGAAQLLMKR- MAB_0181|M.abscessus_ATCC_1997 VTIITRKAYGGGYAVMGSKQLSADLNYVWPTARIAVIGAEGAAQLLVKR- MAV_2190|M.avium_104 VTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAVGILHKKK ::: : ** .* . * . . :* : .... :: : Mb0928c|M.bovis_AF2122/97 AHAAELAAAQGIRSADLLKSGIVDTIVPEYPDAADEPIEFALRLSNAIAA Rv0904c|M.tuberculosis_H37Rv AHAAELAAAQGIRSADLLKSGIVDTIVPEYPDAADEPIEFALRLSNAIAA MMAR_4626|M.marinum_M THAAELAAAQGIRSADLLAAGIVDVIVPELPDAAAEPVEFAQRLSIAIAT MUL_0237|M.ulcerans_Agy99 THAAELAAAQGIRSADLLAAGIVDVIVPELPDAAAEPVEFAQRLSIAIAT Mvan_4993|M.vanbaalenii_PYR-1 DHAPELAAAQGIRSADLLRNGIVDAIVPEHPDAADEPQAFTQRLSATIAV Mflv_1754|M.gilvum_PYR-GCK DHAPELAAAQGIRSVDLLRDGIVDAVVPEHPDAADEPRAFVERLSATIAV MSMEG_5642|M.smegmatis_MC2_155 EHAPELAAAQGVRAVDLLRHGIVDVVVAEKPDAADEPRAFTARLSTAIAA TH_0091|M.thermoresistible__bu DHAPELAARQGIRSVDLLRHGIVDAIVDERPDAADEPMEFTARLADSIAV MLBr_00102|M.leprae_Br4923 FPDPSSPDVQAIR--KTFVDNYNLNMAIPWIAAERGFIDAVVEPHQTRLL MAB_0181|M.abscessus_ATCC_1997 FPDPTAPEVQKIR--ADFIEGYNKNLATPWIAAERGYIDGVIEPHQTRLL MAV_2190|M.avium_104 LAAAPEHEREALH--DQLAAEHEKIAGGVDSAIEIGVVDEKIDPAHTRSK . : :: : : Mb0928c|M.bovis_AF2122/97 EVHALRKIPAPERLATRLQRYRRIGLPRD- Rv0904c|M.tuberculosis_H37Rv EVHALRKIPAPERLATRLQRYRRIGLPRD- MMAR_4626|M.marinum_M EVAALREIPDAQRMTARLARYRSIGLPRDR MUL_0237|M.ulcerans_Agy99 EVAALREIPDAQRMTARLARYRSIGLPRDR Mvan_4993|M.vanbaalenii_PYR-1 ELHRLRTVPDEQRLAARLERYRRIGLP--- Mflv_1754|M.gilvum_PYR-GCK ELHRLRFAPEAERSASRLERYRRIGLA--- MSMEG_5642|M.smegmatis_MC2_155 ELHNLRAVPDDERLQTRLQRYRRIGL---- TH_0091|M.thermoresistible__bu ELHRLREMPAESRLETRLARYRRIGLPR-- MLBr_00102|M.leprae_Br4923 LRKSLHLLRDKQQWWRVGRKHGLIPL---- MAB_0181|M.abscessus_ATCC_1997 LRKSLKLLRDKQKHDRMQRKHGLTPI---- MAV_2190|M.avium_104 LTEALAQAPARR------GRHKNIPL---- * :: :