For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLGWWRGWWQRPDQFDWFSAYLRDRGLQVRWRMATFVFTVLLVAVPVVMVGSPAGPGGPLQTWIVIGAAA SALAASLLWLFRWPSRAQSLAYSTVCSVSIAAGCLAIQDPYAGLMGCTMFAAIGGFVAYFHALAHVVANL VVALSCATINAVRILVETDDIRIVAGSAALVLGLNLGVPFGIHTLVHSLHIDLRDSDRDPLTGLLNRRSF YNMVRDLIAARRQVNTPVNVTMVDLDDFKLLNDTHGHAVGDAALVSVAAVLQEHTEPGTVLGRLGGEEFV IADVDAAARHAITAERIRRGIAATPFQITASFGICSTTVAAGAEIDHPGFLDRLIRAADAAMYQSKRAGG NRVVHDRLDIPG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2385 | - | - | 100% (362) | diguanylate cyclase |
M. vanbaalenii PYR-1 | Mvan_1665 | - | 2e-68 | 42.24% (348) | diguanylate cyclase |
M. vanbaalenii PYR-1 | Mvan_4819 | - | 2e-64 | 38.40% (349) | diguanylate cyclase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1389c | - | 7e-12 | 31.93% (166) | hypothetical protein Mb1389c |
M. gilvum PYR-GCK | Mflv_4002 | - | 1e-119 | 59.66% (357) | diguanylate cyclase |
M. tuberculosis H37Rv | Rv1354c | - | 7e-12 | 31.93% (166) | hypothetical protein Rv1354c |
M. leprae Br4923 | MLBr_00397 | - | 2e-13 | 31.45% (159) | putative transporter protein |
M. abscessus ATCC 19977 | MAB_3940c | - | 7e-40 | 30.34% (379) | hypothetical protein MAB_3940c |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1995 | - | 5e-59 | 37.64% (356) | diguanylate cyclase |
M. smegmatis MC2 155 | MSMEG_2774 | - | 2e-32 | 30.43% (345) | diguanylate cyclase |
M. thermoresistible (build 8) | TH_3406 | - | 2e-53 | 33.61% (363) | PUTATIVE diguanylate cyclase |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb1389c|M.bovis_AF2122/97 ------------------MCNDTATPQLEELVTT--VANQLMTVDAATSA Rv1354c|M.tuberculosis_H37Rv ------------------MCNDTATPQLEELVTT--VANQLMTVDAATSA Mvan_2385|M.vanbaalenii_PYR-1 ----------MLGWWRGWWQRPDQFDWFSAYLRDRGLQVRWRMATFVFTV Mflv_4002|M.gilvum_PYR-GCK ----------MPASDRQWWRQTDQFEWFSNYLRERGMQQRWRWATFTFTV MAB_3940c|M.abscessus_ATCC_199 MIVSYIRSTAWMGFLRQWWTEPVPTGWLRGFLHARKLDRTVRNLIGGYAL MAV_1995|M.avium_104 -----------MKWLAAWWGQPDHFDWLTGYLQDHGFGTATRRAMAVVGA MSMEG_2774|M.smegmatis_MC2_155 ------------------MSPFDHYYARTAMLSAQGQRSRMRRIIGVTIT TH_3406|M.thermoresistible__bu ----------MLKALRRTWRKPDHYYWFTSFLAARRARTSTCRFIASITL MLBr_00397|M.leprae_Br4923 --------MDHTTKCDAEQYFQAIVTSMADGVIVVDIDGRIESINPAATR : Mb1389c|M.bovis_AF2122/97 EVSQRVLAYLVEQLGV----DVSFLRHNDRDRRATRLVAEWPPRLN-IPD Rv1354c|M.tuberculosis_H37Rv EVSQRVLAYLVEQLGV----DVSFLRHNDRDRRATRLVAEWPPRLN-IPD Mvan_2385|M.vanbaalenii_PYR-1 LLVAVPVVMVGSPAGP----GGPLQTWIVIGAAASALAASLLWLFR-WPS Mflv_4002|M.gilvum_PYR-GCK VLGALPLVMLASPLGP----DTDLTRGVAIVSGAAGAGASLLWLSG-WPS MAB_3940c|M.abscessus_ATCC_199 IFAAICIAVQFSDTGP----RSMIGRVIVGLCAVGSLGWALRWAVGPWPS MAV_1995|M.avium_104 SLVLVPANVLWGATPF----FPGLTLTVSVLAGMVGLGMAVLWLHG-WPT MSMEG_2774|M.smegmatis_MC2_155 ALAFVPVLMLASPAGP----AGAL-RYVPLGATACGVLMSVWWWRRKWPS TH_3406|M.thermoresistible__bu ILGLMPMVMLAGPAGP----QSMPGRLIAVAVTVTALVITLIWLRDRWPS MLBr_00397|M.leprae_Br4923 ILGLRAHDVVDMKHGHPFCFYDTDNQRVDLEREVMRVVRREVTTVSKVVG . Mb1389c|M.bovis_AF2122/97 PDPLRLIYFADADPVFALCEHAKEP---LVFRPEP--ATEDYQRLIEEAR Rv1354c|M.tuberculosis_H37Rv PDPLRLIYFADADPVFALCEHAKEP---LVFRPEP--ATEDYQRLIEEAR Mvan_2385|M.vanbaalenii_PYR-1 RAQSLAYSTVCSVSIAAGCLAIQDPYAGLMGCTMF--AAIGGFVAYFHAL Mflv_4002|M.gilvum_PYR-GCK RTQSLVYNALCSGGIAMGCLALSNPYSGLMGCTLF--AVIGGFLAYFHSV MAB_3940c|M.abscessus_ATCC_199 LREAVAFVAFADIGIAVACWQDSDPLAGLVGTVLF--TPVGAYVSFFLAN MAV_1995|M.avium_104 RRQSVVFALTGSVAIGAGCLWQTEPLVGLMACSAL--SVTGGYNAFFHTA MSMEG_2774|M.smegmatis_MC2_155 RNQSWLVVGIGTVGIAVTLSSMSDPTVGLLSSSVF--SLVTTYSAFLHSR TH_3406|M.thermoresistible__bu RNQSRVVSLAAGLAIAVFAFTLPDPSAGLVWTAAF--AVLAGYVALFHSA MLBr_00397|M.leprae_Br4923 IDQHSGQRLWLSVNVSLLAYKAPPHSALVVSFSDISAHHLSIERLTYEAT : :: : Mb1389c|M.bovis_AF2122/97 GVPVTSAAAVPLVSGEITTGLLGFIKFGDRKWHEAELNALMTIATLFAQV Rv1354c|M.tuberculosis_H37Rv GVPVTSAAAVPLVSGEITTGLLGFIKFGDRKWHEAELNALMTIATLFAQV Mvan_2385|M.vanbaalenii_PYR-1 AHVVANLVVALSCATINAVRILVET--DDIRIVAGSAALVLGLNLGVPFG Mflv_4002|M.gilvum_PYR-GCK GQVAANFAVAAICATITAARLVTET--GDVALTAAAAINVIALNTGVPFG MAB_3940c|M.abscessus_ATCC_199 RLLVAHVAWCAPMIIALSSRLFAEGTVGAAMTALVKVTSMLLVVVLIPAV MAV_1995|M.avium_104 KFMGLNFGLAGAIGALQAARLAAS---GQAMLAFTGYFLVLELNVIVPLS MSMEG_2774|M.smegmatis_MC2_155 RVLVLSWIASGLTVGFLAIRVAFTS----IPMALSGALVSGLVIATTSML TH_3406|M.thermoresistible__bu RYATFTVLFAAITAGVLSFELAKTAG---VAAAVCGFVFITVVTFAVVCA MLBr_00397|M.leprae_Br4923 HDCLTGLANRRFAEDQITKSLQHDERSRLAAVLLLDLDDFKVINDSLGHD : : : Mb1389c|M.bovis_AF2122/97 QARVAAEARLRYLAD---HDDLTGLHNRRALLQHLDQRLAPGQPGP---- Rv1354c|M.tuberculosis_H37Rv QARVAAEARLRYLAD---HDDLTGLHNRRALLQHLDQRLAPGQPGP---- Mvan_2385|M.vanbaalenii_PYR-1 IHTLVHSLHIDLRDS--DRDPLTGLLNRRSFYNMVRDLIAARRQVN---- Mflv_4002|M.gilvum_PYR-GCK IHSLVHSLHTDLRAA--DRDPLTGLLNRRAFYSAVNQLLADTHAVD---- MAB_3940c|M.abscessus_ATCC_199 IQFGIAVVRWDALAA--QRDPLTGLLNRRGIYAEWQRLYGELRREQPLDG MAV_1995|M.avium_104 IQIVVRALWLDLLRA--NRDPLTGLLNRR---ACNRAIIGRMLTG---AS MSMEG_2774|M.smegmatis_MC2_155 CRMAIRLLDAGNVQHPNEIDRLTGLLNREAFEIQAATMLGSHSRHD---- TH_3406|M.thermoresistible__bu CNLLVGLLDVDVLDA--DIEPLTGLLNRDAFYRSAGHLI-SRSRDD---- MLBr_00397|M.leprae_Br4923 VGDAVLQTVAQRLRSAVRPDDVVARLGGDEFIVLLRGPLSDMNAND---V : :.. . Mb1389c|M.bovis_AF2122/97 ---VAALFLDLDRLKAINDYLGHAAGDQFIHVFAQRIGDALVGESLIARL Rv1354c|M.tuberculosis_H37Rv ---VAALFLDLDRLKAINDYLGHAAGDQFIHVFAQRIGDALVGESLIARL Mvan_2385|M.vanbaalenii_PYR-1 -TPVNVTMVDLDDFKLLNDTHGHAVGDAALVSVAAVLQEHTEPGTVLGRL Mflv_4002|M.gilvum_PYR-GCK -AAFNVTVIDLDKFKSLNDTRGHAVGDAALVYVAEILHRHAGASAVSGRL MAB_3940c|M.abscessus_ATCC_199 DQVTAAAIVDIDRFKSINDRYGHGTGDRVLIDVAHALTCGTTGTSVVGRS MAV_1995|M.avium_104 HMFLAVAMVDLDRFKALNDTHGHAAGDEALIAVAGALTAACGDTTVVGRV MSMEG_2774|M.smegmatis_MC2_155 DQYLVILAVGIDDMSLLSDMDGTHSTLHARVAVAQALRETVRHRVPLAHV TH_3406|M.thermoresistible__bu DRQLVIALINIDNLRLLRDTQGQAAADRARVAIGQTLRENTRHNAFVAHL MLBr_00397|M.leprae_Br4923 AKRLHTTLSESLVVDQLTVPIGASVGILEVRPDDRRRAADILRDADSAMY . : * . Mb1389c|M.bovis_AF2122/97 GGDEFVLIPASPMSADAAQPLAERLRDQLKDHVAIG----GEVLTRTVSI Rv1354c|M.tuberculosis_H37Rv GGDEFVLIPASPMSADAAQPLAERLRDQLKDHVAIG----GEVLTRTVSI Mvan_2385|M.vanbaalenii_PYR-1 GGEEFVIADVDAAAR--HAITAERIRRGIAATPFQ---ITASFGICSTTV Mflv_4002|M.gilvum_PYR-GCK GGEEFVVADVDLPVL--QRRTADLIREGIAAGPFG---ITASLGICSARI MAB_3940c|M.abscessus_ATCC_199 GGEEFLVVTVCPASA--VAEFATRLRQAVTASMPAGIAVTASVGVAAQAV MAV_1995|M.avium_104 GGEEFLVADIVTTEQ--LPGWGQQLCEAVAALDPP---VTASVGTATLPL MSMEG_2774|M.smegmatis_MC2_155 SDSEFLIADVFKTND--PSPLVERMRLAISTTPMR---LTASIGTVCSPL TH_3406|M.thermoresistible__bu GQDEFLIADTFSSTD--SFPLVERVRGAIATTPPR---LTASIGVVSTPM MLBr_00397|M.leprae_Br4923 AAKNKKQCAVTPQQLVPFVALIALFVFFTAAAGAKFYAPSNLLVILQQTV . .: . . : Mb1389c|M.bovis_AF2122/97 GVASGTP---GQHTPSDLLRRADQAALAAKHAGGDSVAIFTADMSVSGEL Rv1354c|M.tuberculosis_H37Rv GVASGTP---GQHTPSDLLRRADQAALAAKHAGGDSVAIFTADMSVSGEL Mvan_2385|M.vanbaalenii_PYR-1 AAGAEID---HPGFLDRLIRAADAAMYQSKRAGGNRVVHDRLDIPG---- Mflv_4002|M.gilvum_PYR-GCK AWEDSAAGGMSPDFLDKLIESADAAMYVSKRAGGDRVEHRRLDGADLADA MAB_3940c|M.abscessus_ATCC_199 SRVVSAT---SQEAIEVLTACADRAMYEAKHDGGDQSRILHADDDSEGRY MAV_1995|M.avium_104 RDLVSEY---AEHAFHQLVAQADSAMYEAKRCGGNQTRHRPAQVST---- MSMEG_2774|M.smegmatis_MC2_155 APLASLP---AEQVLQELIDVAMRAMNESRAAGGNQTISVNYPTPTPNQE TH_3406|M.thermoresistible__bu RGLAVCP---PETLLDELIAVASATMYEARRAGGNQARYRKYPNPTAVTE MLBr_00397|M.leprae_Br4923 VLAIVGYG-MTFVIMAGSVDLSVGSIVALTGVTAALVAAQNQFAAIVTAL : : . Mb1389c|M.bovis_AF2122/97 RNDIELHLRRGIESDALRLVYLPEVDLRTGDIVGTEALVRWQHPTRGLLA Rv1354c|M.tuberculosis_H37Rv RNDIELHLRRGIESDALRLVYLPEVDLRTGDIVGTEALVRWQHPTRGLLA Mvan_2385|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3940c|M.abscessus_ATCC_199 LWRSGA-------------------------------------------- MAV_1995|M.avium_104 -------------------------------------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------------------------------------- TH_3406|M.thermoresistible__bu AHYPEQAADDF--------------------------------------- MLBr_00397|M.leprae_Br4923 LVGLAAGMVNGIVFAYGKIPSFVSTLGMLQVCRGITLMISDSSAKPMPFH Mb1389c|M.bovis_AF2122/97 PGCFIPVAESINLAGELDRWVLRRACNEFSEWQSAGLGHDALLRINVSAG Rv1354c|M.tuberculosis_H37Rv PGCFIPVAESINLAGELDRWVLRRACNEFSEWQSAGLGHDALLRINVSAG Mvan_2385|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3940c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1995|M.avium_104 -------------------------------------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------------------------------------- TH_3406|M.thermoresistible__bu -------------------------------------------------- MLBr_00397|M.leprae_Br4923 GILGAMGAMPWILIVCLFVTILAGILFQFTMFGRWVKAIGGNERVATLAG Mb1389c|M.bovis_AF2122/97 QLVTGGFVDFVADTIGQHGLDASSVCLEITENVVVQDLHTARATLARLKE Rv1354c|M.tuberculosis_H37Rv QLVTGGFVDFVADTIGQHGLDASSVCLEITENVVVQDLHTARATLARLKE Mvan_2385|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3940c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1995|M.avium_104 -------------------------------------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------------------------------------- TH_3406|M.thermoresistible__bu -------------------------------------------------- MLBr_00397|M.leprae_Br4923 VPTRGIKVAIFAICGLTAGLGGIVLASRLGAGTPTAATGFEIDVIAAVVI Mb1389c|M.bovis_AF2122/97 VGVHIAIDDFGTGYSAISLLQTLPIDTLKIDKTFVRQLGTNTSDLVIVRG Rv1354c|M.tuberculosis_H37Rv VGVHIAIDDFGTGYSAISLLQTLPIDTLKIDKTFVRQLGTNTSDLVIVRG Mvan_2385|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3940c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1995|M.avium_104 -------------------------------------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------------------------------------- TH_3406|M.thermoresistible__bu -------------------------------------------------- MLBr_00397|M.leprae_Br4923 GGTPLTGGLGRLSGTLIGAIIISMLSNGMVFMGVGNAASQIIKGIMLAAA Mb1389c|M.bovis_AF2122/97 IMTLAEGFQLDVVAEGVETEAAARILLDQRCYRAQGFLFSRPVPGEAMRH Rv1354c|M.tuberculosis_H37Rv IMTLAEGFQLDVVAEGVETEAAARILLDQRCYRAQGFLFSRPVPGEAMRH Mvan_2385|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3940c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1995|M.avium_104 -------------------------------------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------------------------------------- TH_3406|M.thermoresistible__bu -------------------------------------------------- MLBr_00397|M.leprae_Br4923 VFVFLQRRKIGIIK------------------------------------ Mb1389c|M.bovis_AF2122/97 MLSARRLPPTCIPATDPALS Rv1354c|M.tuberculosis_H37Rv MLSARRLPPTCIPATDPALS Mvan_2385|M.vanbaalenii_PYR-1 -------------------- Mflv_4002|M.gilvum_PYR-GCK -------------------- MAB_3940c|M.abscessus_ATCC_199 -------------------- MAV_1995|M.avium_104 -------------------- MSMEG_2774|M.smegmatis_MC2_155 -------------------- TH_3406|M.thermoresistible__bu -------------------- MLBr_00397|M.leprae_Br4923 --------------------