For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDVVSGVDSGESLTVRKQRATKARIAAAAAQSVIDHGLAAATVERIAAAAEVGRATFFRYFSAKEDAVAE GMTAHWLDLITAAIAAQPPHLPAGAALAAAFEDLGDGFDAISGQVRELATLTRSSPVFSAWTLQIYLRYE SAIAELLGPRCPDPAPDDPRPRLLGALAMASVRIALDDWLVHGGSLPDRVRAALASIEVV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2270 | - | - | 100% (200) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1927 | - | 2e-12 | 28.43% (197) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1156 | - | 1e-10 | 31.53% (203) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0790c | - | 1e-05 | 30.34% (89) | hypothetical protein Mb0790c |
M. gilvum PYR-GCK | Mflv_4072 | - | 4e-87 | 80.40% (199) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0767c | - | 1e-05 | 30.34% (89) | hypothetical protein Rv0767c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3705 | - | 3e-07 | 36.47% (85) | TetR family regulatory protein |
M. marinum M | MMAR_0222 | - | 2e-65 | 67.55% (188) | TetR family transcriptional regulator |
M. avium 104 | MAV_2657 | - | 3e-12 | 30.46% (174) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_5673 | - | 6e-10 | 43.04% (79) | transcriptional regulator |
M. thermoresistible (build 8) | TH_3524 | - | 2e-08 | 30.59% (170) | PUTATIVE - |
M. ulcerans Agy99 | MUL_4892 | - | 4e-64 | 65.96% (188) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2270|M.vanbaalenii_PYR-1 ----------MDVVSGVDSGESLTVRKQRATKARIAAAAAQSVIDHGLAA Mflv_4072|M.gilvum_PYR-GCK ----MRHSLIMDAVSGPKSGESLTVRRQRATKARIAAAAAEAVAAHGLAG MMAR_0222|M.marinum_M -------------MSPPPAATSLAERKRTATRQRIATAAAQLVADLGLAA MUL_4892|M.ulcerans_Agy99 -------------MSPPPAATALAERKRTATRQRIATAAAQLVADLGLVA Mb0790c|M.bovis_AF2122/97 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYAD Rv0767c|M.tuberculosis_H37Rv MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYAD MAV_2657|M.avium_104 ---------------MARGDRSPRDAHADRVRNALLNAALNLFSTNGYDE MSMEG_5673|M.smegmatis_MC2_155 -------------MAYQTQQPGLRERKKQRTRATLISAAIDLCVRQGYEQ TH_3524|M.thermoresistible__bu -------------------------VRGHRNREALIAAAIDLFTVNGYEQ MAB_3705|M.abscessus_ATCC_1997 -----------------------MPPDASATKKRLLDAAYAEFAEHGLAG : ** . Mvan_2270|M.vanbaalenii_PYR-1 ATVERIAAAAEVGRATFFRYFSAKEDAVAEGMTAHWLDLITAAIAAQPPH Mflv_4072|M.gilvum_PYR-GCK ATIEHIAAAAEVGRATFFRYFSAKEDAVVEGMAAHWLDAIADAIAAQPPE MMAR_0222|M.marinum_M ATVERIADTADISRATFFRYFNSKEDAVAEGMTAHWLDRIATALAAQPEH MUL_4892|M.ulcerans_Agy99 ATVERIADTADISRATFFRYFNSKEDAVAEGMTAHWLDRIATALAAQPEH Mb0790c|M.bovis_AF2122/97 LTVRLVAARAKVAPATAYTYFSSKNHLIAE-VYLDLVRQVPCVTDVNVPM Rv0767c|M.tuberculosis_H37Rv LTVRLVAARAKVAPATAYTYFSSKNHLIAE-VYLDLVRQVPCVTDVNVPM MAV_2657|M.avium_104 TTTDQIAESVGVSPRTFFRYFPTK-ESVLFFGEYDFIDAVSGVYLAQPEE MSMEG_5673|M.smegmatis_MC2_155 TTVEQIAAAAEVSARTFSRYFATK-DAVMLAFLDDVVDLVAGELAQQPPE TH_3524|M.thermoresistible__bu TTVEQIAEAAGVAPRTFFRHFAAKEDILFHGYADRLAEATRRFRAARSGS MAB_3705|M.abscessus_ATCC_1997 ARVDRIGAAAEANKRLLYVYYTNK-ETLFDIVVAHSIQQMSEAVPFTPED :. . :: * . : Mvan_2270|M.vanbaalenii_PYR-1 LPAGAALAA----AFEDLGDGFD--AISGQVRELATLTRSSPVFSAWTLQ Mflv_4072|M.gilvum_PYR-GCK LAADAAVVA----AFQDLGHGFE--AVSDQVRELAVMTRSSPVFSAWTLQ MMAR_0222|M.marinum_M LSAVEAVVG----AFGGLAVGFA--EMEDQVRELATLTRSSETLEAWTLH MUL_4892|M.ulcerans_Agy99 QSAVEAVVG----AFGGLAVGFA--EMEDQVRELATLTRSSETLEAWTLH Mb0790c|M.bovis_AF2122/97 PIRVTSSLR----HLALVVADEP--EIGAACTAALLDGGADPAVRAVRDR Rv0767c|M.tuberculosis_H37Rv PIRVTSSLR----HLALVVADEP--EIGAACTAALLDGGADPAVRAVRDR MAV_2657|M.avium_104 ASDFEALAN----SFALLAPGLK--RIRKRIAQYHDAVASSLVLLGRERK MSMEG_5673|M.smegmatis_MC2_155 LGELDAVFCAHITAFEKTRVAMPGQLTDDRLLAAARIFTSSPSLMQATMG TH_3524|M.thermoresistible__bu LWKALAEAS------EAVATAIA--ENPGIFLVRARMYGELPALRATMLR MAB_3705|M.abscessus_ATCC_1997 LPGYAGALFD---HLIKHPEHLR----LATWAQLERPAAGPAETSAYAAK . Mvan_2270|M.vanbaalenii_PYR-1 I-YLRYESAIAELLGPRCPDPAPDDPRPRLLGALAMA-SVRIALDDWLVH Mflv_4072|M.gilvum_PYR-GCK L-YLRYEAAIADLVGIRMADPAPDDPRPRLLGALAMA-SVRIALDDWLVH MMAR_0222|M.marinum_M I-YVRYESAIADLIAPRIPNLVPQDPRPRLVGALAMA-VVRIALDDWLGQ MUL_4892|M.ulcerans_Agy99 I-YVRYESAIADLIAPRIPNLVPQDPRPRLVGALAMA-VVRIALDDWLGQ Mb0790c|M.bovis_AF2122/97 I-GAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAGSGTFTYHEIADR Rv0767c|M.tuberculosis_H37Rv I-GAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAGSGTFTYHEIADR MAV_2657|M.avium_104 N-HEANAETVAQVIAERRRMPAP-DSECRLLAAVGML-LVERALNQWLST MSMEG_5673|M.smegmatis_MC2_155 FRPAPLFEVLAKRMGVSADDRKIALIASLWNAIMTTALVQLVPDVDWATV TH_3524|M.thermoresistible__bu I-NDDWIDQMTTEVARWLGSDAAVDVRPRLAATVING-ANRTAIDLWVSA MAB_3705|M.abscessus_ATCC_1997 VAAIAQTGLSAGDVEPADILALTLGLTTAWLGASPALRGLAASEPFSPER : : . . Mvan_2270|M.vanbaalenii_PYR-1 GG------SLPDRVRAALASIEVV----------------- Mflv_4072|M.gilvum_PYR-GCK GG------SLPERVRTALASLHVA----------------- MMAR_0222|M.marinum_M GG------SLPDRVQQGLAAIVIA----------------- MUL_4892|M.ulcerans_Agy99 GG------SLPDRVQQGLAAIVIA----------------- Mb0790c|M.bovis_AF2122/97 LG------YVVGLILAGANEPSTGGSE-------------- Rv0767c|M.tuberculosis_H37Rv LG------YVVGLILAGANEPSTGGSE-------------- MAV_2657|M.avium_104 PGR-----SLDDLIRQEFAALPAVLK--------------- MSMEG_5673|M.smegmatis_MC2_155 TVE-----RIVNQMRTTYAEFLEVAGRRHEFA--------- TH_3524|M.thermoresistible__bu DGKGDLVELMADAVRLVRPTLDRIERESRTVANPVRRRDVV MAB_3705|M.abscessus_ATCC_1997 LAT-----HRTALIAAVEALVSAAAR--------------- :