For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
FAGLDEPALLAAIERAACEESRAGARKSAAIAALVHESVTFDDVRDQWVWDSWAETACELGAALNTSHRR ASAQMRIAVALHDRLPKVAALFAAGRLSTRLIGQITWRTRLVQDPHLLALLDTAMADKATRWEPLSDDKL TAALDAVIERYDPDAVIRAREHVSGLDFRVGASDDPDALVTVWGKILGCDAAVLAARIAELLKGLCDNDP RSVCVRRSHAVGAIVRGQDHLRCRCGSPDCTAAAVVPGSSNVVISVLADPAALDAVRQLIADQDRDQQDK LADKHAQAKGKAEPEPEAGASEVGEDEESETAEPVREDEELRPEPQTEPRASEVDEDEEPESESEPAAET TPATPAVEPVPSPSPVNRGRCVRDSGVALLPGVKILPIVALAEAIRAGAAIKTLWLPGPDPEPHYRPSAK LAAFVRARDLFCRYPGCDVPAEHCDLDHVVPYPYGPTHPSNLNCKCRTHHLGKTFADGWHEEQLPDGTVV WTTPAGQRNTTVPGSRLFFPAWDTTTAELPPMTAPPPDPNRLAKMPKRRRTRAADTAARIKTEREHNATQ RALESERATAVEHDRQAGRPPPTDYGDEPPPF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2144 | - | - | 100% (593) | hypothetical protein Mvan_2144 |
M. vanbaalenii PYR-1 | Mvan_2714 | - | 0.0 | 93.32% (599) | hypothetical protein Mvan_2714 |
M. vanbaalenii PYR-1 | Mvan_5188 | - | 0.0 | 82.51% (606) | hypothetical protein Mvan_5188 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3805 | - | 1e-119 | 44.46% (560) | hypothetical protein Mb3805 |
M. gilvum PYR-GCK | Mflv_1272 | - | 0.0 | 74.20% (593) | HNH endonuclease |
M. tuberculosis H37Rv | Rv3776 | - | 1e-119 | 44.46% (560) | hypothetical protein Rv3776 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4752 | - | 5e-38 | 38.46% (260) | hypothetical protein MAB_4752 |
M. marinum M | MMAR_5187 | - | 7e-48 | 45.53% (246) | 13e12 repeat-containing protein |
M. avium 104 | MAV_3457 | - | 2e-50 | 46.03% (252) | 13e12 repeat-containing protein |
M. smegmatis MC2 155 | MSMEG_5583 | - | 1e-105 | 38.12% (606) | HNH endonuclease |
M. thermoresistible (build 8) | TH_0334 | - | 3e-38 | 34.96% (266) | HNH endonuclease |
M. ulcerans Agy99 | MUL_2679 | - | 3e-39 | 37.31% (260) | 13e12 repeat-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MAV_3457|M.avium_104 ---------MVEHMFEYVVAS--------RSTPEAVALLDRAREAARAEA MUL_2679|M.ulcerans_Agy99 ---------MDQHIIEYVFDT--------DDS----APLTRITAAARAEA MMAR_5187|M.marinum_M MFESMGVAAGVDHPCDALAERR----QLRTPTAESARWVQRIGAAARAEN MAB_4752|M.abscessus_ATCC_1997 -------------MFDELGDV---------------ELIDLIASAQRAEA TH_0334|M.thermoresistible__bu -------------MFESLDDG---------------AVVDSIAAASREQS Mvan_2144|M.vanbaalenii_PYR-1 ----------------MFAG------------LDEPALLAAIERAACEES Mflv_1272|M.gilvum_PYR-GCK ------------MFDSGLAG------------LDKPALISAIEQAACEEV Mb3805|M.bovis_AF2122/97 ------------MFEISLSDP------VELRDADDAALLAAIEDCARAEV Rv3776|M.tuberculosis_H37Rv ------------MFEISLSDP------VELRDADDAALLAAIEDCARAEV MSMEG_5583|M.smegmatis_MC2_155 ----------MCLLVVPVCDTGCMPFEHTFDDLDDAALVAGIEGCERAQN . : . : MAV_3457|M.avium_104 RAAAARLVAVAELLVLR--CRETGERADWAADAWEAVAAQVGAALGCSVA MUL_2679|M.ulcerans_Agy99 RAAAERLAAIGDLFRLR--LSQHGNREDWVADTCDAVAAEVAAALNTSVA MMAR_5187|M.marinum_M RAAAAQLIEIGQLFAYR--LSRCSETEDWAVDTMEAVAAEVAAGLRISQG MAB_4752|M.abscessus_ATCC_1997 QACARKLDAIGVLVDRHADLGKPDERDHHALDRWDRVASEVAAAQGITHA TH_0334|M.thermoresistible__bu AACGREMLAIGELYARR-APEDDTERANWAIDGHANVVAEISAALNISRG Mvan_2144|M.vanbaalenii_PYR-1 RAGARKSAAIAALVHES--VTFDDVRDQWVWDSWAETACELGAALNTSHR Mflv_1272|M.gilvum_PYR-GCK RAGARKTAAIAALVHDH--VTYDDVRDEWVWDSWIETACELGAVLNTSHR Mb3805|M.bovis_AF2122/97 AAGARRLSAIAELTSR---RTGNDQRADWACDGWDCAAAEVAAALTVSHR Rv3776|M.tuberculosis_H37Rv AAGARRLSAIAELTSR---RTGNDQRADWACDGWDCAAAEVAAALTVSHR MSMEG_5583|M.smegmatis_MC2_155 AAAARKLALVARFTARRA-ADSEDEVLRWAGDDWAATAAEVGAALNVGPA * . . :. : . * ...::.* MAV_3457|M.avium_104 MGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQTLVFRTDLITDAQVLA MUL_2679|M.ulcerans_Agy99 MGHSNLRYARAMRERLPQLGAEFRAGGIDFRLFRTIVFRTDLITESDALA MMAR_5187|M.marinum_M LAASRLRYARALRERLPKTGAVFAAGQIDLRAFQTIVFRTDLIVDPQVMA MAB_4752|M.abscessus_ATCC_1997 LASSQMRYAQVLRHRLRAVAERFAAGDLDFRTVALIINRTELVDDEAVVA TH_0334|M.thermoresistible__bu RAAGRLQLAIDLRERLPRVAAVFAAGDIDFRMVSALVNRSRNVVDPDLLA Mvan_2144|M.vanbaalenii_PYR-1 RASAQMRIAVALHDRLPKVAALFAAGRLSTRLIGQITWRTRLVQDPHLLA Mflv_1272|M.gilvum_PYR-GCK RASAQMRIAVALRDRLPGVAALHAQGRLSARLIGQITWRTRLVQDPQALA Mb3805|M.bovis_AF2122/97 KASGQMHLSLTLN-RLPQVAALFLAGQLSARLVSIIAWRTYLVRDPEALS Rv3776|M.tuberculosis_H37Rv KASGQMHLSLTLN-RLPQVAALFLAGQLSARLVSIIAWRTYLVRDPEALS MSMEG_5583|M.smegmatis_MC2_155 VASKWMRVAQEVGERLPRVQEMFAAGWLSAQVVATLTWATHLVGDEQVLA . :: : : ** . * :. : . : : : : :: MAV_3457|M.avium_104 RVDATLAVLVSRRPSLTRGGLAAAVDRVVAAVDADAVRRARDAVTGRYLD MUL_2679|M.ulcerans_Agy99 AVDARLAIKAPRWPSMTSWKLATEVDRVVAKFDRDAVRRSRRDAADRYVD MMAR_5187|M.marinum_M AVDALVALNVGRWPSMTKARLSGQIDAIVARADADAVRRRKERHADREIW MAB_4752|M.abscessus_ATCC_1997 RVDAAIVRALPRWARWSHKRITAALDALVLHFDQDAVRRNRSATDKRHLE TH_0334|M.thermoresistible__bu RLDAALAAWSPKWMKLSGPTLNERIDMWVERFDPTGVREPRSPGEDRYVV Mvan_2144|M.vanbaalenii_PYR-1 LLDTAMADKATRWEPLSDDKLTAALDAVIERYDPDAVIRAREHVSGLDFR Mflv_1272|M.gilvum_PYR-GCK LIDAAIAEKATRWEPLSEDNLTAALDAVIERFDPDAVIRTREQLKGVDFR Mb3805|M.bovis_AF2122/97 LLDAALAKHATAWGPLSAPKLEKAIDSWIDRYDPAALRRTRISARSRDLC Rv3776|M.tuberculosis_H37Rv LLDAALAKHATAWGPLSAPKLEKAIDSWIDRYDPAALRRTRISARSRDLC MSMEG_5583|M.smegmatis_MC2_155 IVDAQLAARAREFGPMTVDGVKAAVASLLEKYDPAAVRRSREASRDRDVR :*: :. : : : : * .: . : . MAV_3457|M.avium_104 VRANESG--MAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRAD MUL_2679|M.ulcerans_Agy99 CAPLEPG--MALVNRQVFSATAEALARRLDELAKTVCADDPRTVVQRRAD MMAR_5187|M.marinum_M IGQDADG--ISRIDGSMFTIDAHALDRRLSALAATVCAQDPRSREQRRAD MAB_4752|M.abscessus_ATCC_1997 IRPLGNGEPVAEVWGTLQAVHAVALDKRLDLLAGTVCPADPRSKTQRRAD TH_0334|M.thermoresistible__bu VTPAGQG--MVDVSARLTFEAGFAFXTRLDQIAATVCRDDPRTADQRRAD Mvan_2144|M.vanbaalenii_PYR-1 VGASDDPDALVTVWGKILGCDAAVLAARIAELLKGLCDNDPRSVCVRRSH Mflv_1272|M.gilvum_PYR-GCK IGASDDPDALVTVWGKILGCDAVVLAARIAELLKGLCDADPRGIGERRSC Mb3805|M.bovis_AF2122/97 IGDPDEDAGTAALWGRLFATDAAMLDKRLTQLAHGVCDDDPRTIAQRRAD Rv3776|M.tuberculosis_H37Rv IGDPDEDAGTAALWGRLFATDAAMLDKRLTQLAHGVCDDDPRTIAQRRAD MSMEG_5583|M.smegmatis_MC2_155 FGKPDDVTGTVSISGRVNTADAVAYQKRSAHLTGGVCGDDPRTAGQRRAD : : . * : :* *** **: MAV_3457|M.avium_104 ALGALAAGAGRLACGCGSPDCPSAAAPA-PRSTVVIHVVAEQATVAGRGA MUL_2679|M.ulcerans_Agy99 ALGTLAAGQDRLICDCGRTDCPAAGAPQ-QPSRVVIHVVAGCQTVDGAGE MMAR_5187|M.marinum_M ALGVLAAGGDRLGCRCGLPDCAAGARPA-AQP-VVIHVIAERATLDGDGG MAB_4752|M.abscessus_ATCC_1997 AVGALTQGLNRMRCACGHPDCS--GRDT-ADVPVVVNVVINQSTLAGSDD TH_0334|M.thermoresistible__bu AMAAMSEGQNRLVCGCGSEDCPADPADT-AATRLVINVIAEQATVEGRSD Mvan_2144|M.vanbaalenii_PYR-1 AVGAIVRGQDHLRCRCGSPDCTAAAVVP-GSSNVVISVLADPAALDAVRQ Mflv_1272|M.gilvum_PYR-GCK AVGAIVRGQDHLPCRCGSPDCAAAPVVP-GSSNVVISVLADPAALEAVRS Mb3805|M.bovis_AF2122/97 ALGALAAGADRLTCGCGNSDCPSSAGNHRQATGVVIHVVADAAALGAAP- Rv3776|M.tuberculosis_H37Rv ALGALAAGADRLTCGCGNSDCPSSAGNHRQATGVVIHVVADAAALGAAP- MSMEG_5583|M.smegmatis_MC2_155 AFGVIAVQGDRLVCLCGDPQCPWAGVDP-RAANTMVHIFAEPSVVDAKPD *...: .:: * ** :*. :: :. .: . MAV_3457|M.avium_104 -------------------------------------------------- MUL_2679|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5187|M.marinum_M -------------------------------------------------- MAB_4752|M.abscessus_ATCC_1997 -------------------------------------------------- TH_0334|M.thermoresistible__bu -------------------------------------------------- Mvan_2144|M.vanbaalenii_PYR-1 LIAD---------------------QDRDQQDKLADKHAQAKGKAEPEPE Mflv_1272|M.gilvum_PYR-GCK LIAD---------------------EDRHQQDALAEK------------- Mb3805|M.bovis_AF2122/97 -------------------------------------------------- Rv3776|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_5583|M.smegmatis_MC2_155 PYVHGDYASNPVPFVDPEFDPWPVYPERDSTPPPEPPSEPQWAPQWWSEI MAV_3457|M.avium_104 -------------------------------------------------- MUL_2679|M.ulcerans_Agy99 -------------------------------------------------- MMAR_5187|M.marinum_M -------------------------------------------------- MAB_4752|M.abscessus_ATCC_1997 -------------------------------------------------- TH_0334|M.thermoresistible__bu -------------------------------------------------- Mvan_2144|M.vanbaalenii_PYR-1 AGASEVGEDEESETAEPVREDEELRPEPQTEPRASEVDEDEEPESESEPA Mflv_1272|M.gilvum_PYR-GCK ------------------------------QPHAVKAKEQGEP------- Mb3805|M.bovis_AF2122/97 ------------------------------DPRLSGPE------------ Rv3776|M.tuberculosis_H37Rv ------------------------------DPRLSGPE------------ MSMEG_5583|M.smegmatis_MC2_155 PLPPEPEPEPEPEPEPEPEPEPEPELRFESEPQTASAPQPEPEPEARPEP MAV_3457|M.avium_104 ------------------------------------------------TP MUL_2679|M.ulcerans_Agy99 ------------------------------------------------AP MMAR_5187|M.marinum_M ------------------------------------------------AP MAB_4752|M.abscessus_ATCC_1997 ------------------------------------------------CP TH_0334|M.thermoresistible__bu ------------------------------------------------NP Mvan_2144|M.vanbaalenii_PYR-1 AETTPATPAVEPVPSPSPVNRGRCVR--------------------DSGV Mflv_1272|M.gilvum_PYR-GCK -------------AAPAPSNRGRCVR--------------------DSGT Mb3805|M.bovis_AF2122/97 -------------PALAPEAPATPAV--------------------KPPA Rv3776|M.tuberculosis_H37Rv -------------PALAPEAPATPAV--------------------KPPA MSMEG_5583|M.smegmatis_MC2_155 QPKTGPEPEPVSTPKPQPQDPPAAAESWGGGGVNPLVVAPAPVVSPQRAT MAV_3457|M.avium_104 AVVAGLDGLIPAQVIAELAAS-ARLVPVAVPE-GGPEPGYTPSARLADFI MUL_2679|M.ulcerans_Agy99 GVLPG-DGIIPAEIVRELAKS-AKLQPMSTP--ILAETGYVPSPALMDFV MMAR_5187|M.marinum_M AWEVGADGLVTPELVAELAKS-AKLVPLRHPGDVPPEPGYVPSKALADFV MAB_4752|M.abscessus_ATCC_1997 AHVPG-FGVLAAESARAAVAG-TPTRNLTDSR----STGYRPSAKLAAFV TH_0334|M.thermoresistible__bu GYLPG-YGAVPASILRAKAAT-ATLRPVALPQ-PCAEAGYRPSAALTRFI Mvan_2144|M.vanbaalenii_PYR-1 ALLPG-VKILPIVALAEAIRAGAAIKTLWLPG-PDPEPHYRPSAKLAAFV Mflv_1272|M.gilvum_PYR-GCK ALLPG-VKILPIVALAEAIRAGAAIKQLWLPG-PDPEPHYRPSAKLAAFV Mb3805|M.bovis_AF2122/97 ALISG-GGVVPAPLLAELIRGGAALSRVRHPGDLRSEPHYRPSAKLAEFV Rv3776|M.tuberculosis_H37Rv ALISG-GGVVPAPLLAELIRGGAALSRMRHPGDLRSEPHYRPSAKLAEFV MSMEG_5583|M.smegmatis_MC2_155 AVIVG-GGLVPASYVAQMIASGAKVKQGRVPL-EDPESGYRPSVGLAEFV . * :. : . .. * ** * *: MAV_3457|M.avium_104 RCRDLTCRAPGCDRPAVDCDVDHTIPYAQGGPTHPSNLKCLCRGHHLLKT MUL_2679|M.ulcerans_Agy99 RARDLTCRAPGCDRPATQCDVDHTIPYSDGGATHPSNLKCLCRKHHLLKT MMAR_5187|M.marinum_M RCRDLTCRWPGCDHPALNCDLDHTIPYAQGGPTHASNLKCYCRTHHLVKT MAB_4752|M.abscessus_ATCC_1997 RSRDQLCRFPGCEAVADRADIDHTVPWATGGPTTGANLKALCRKHHLLKT TH_0334|M.thermoresistible__bu RCRDLTCRFPGCDAPAAVCQIDHTIPYPAG-PTHPSNLKLLCVFHCRQAE Mvan_2144|M.vanbaalenii_PYR-1 RARDLFCRYPGCDVPAEHCDLDHVVPYPYG-PTHPSNLNCKCRTHHLGKT Mflv_1272|M.gilvum_PYR-GCK RARDLFCRYPGCNVPAEQCDIDHVVPWPYG-PTHPSNLNCKCRTHHLGKT Mb3805|M.bovis_AF2122/97 RIRDMTCRFPGCDQPTEFCDIDHTLPYPLG-PTHPSNLKCLCRKHHLLKT Rv3776|M.tuberculosis_H37Rv RIRDMTCRFPGCDQPTEFCDIDHTLPYPLG-PTHPSNLKCLCRKHHLLKT MSMEG_5583|M.smegmatis_MC2_155 RMRDLTCRFPGCGRPAECCDIDHTEPFPGG-VTHASNIKCLCRFHHLIKT * ** ** *** : .::**. *:. * * :*:: * * MAV_3457|M.avium_104 FWG-WRDRQLPDGTVIWTLPDGDTYVTTPGSALLFPTLCTPTGAVSPAKP MUL_2679|M.ulcerans_Agy99 FWG-WHDEQLPDATVIWSLPDGQTYVTTPGSAWLLPGLFAPSPELPPPP- MMAR_5187|M.marinum_M FWG-WHDQQLPDGTLILTSPAGHTYVTTPGSALLFPSLCHSTGGLPAAEA MAB_4752|M.abscessus_ATCC_1997 FGQ-WTELQEPDGTVIWKSPTGHRYATTPVSWFLFPALTR---------- TH_0334|M.thermoresistible__bu LRF-THDQHKHQSSCLP------AYFQRPHG----PATRRP--------- Mvan_2144|M.vanbaalenii_PYR-1 FADGWHEEQLPDGTVVWTTPAGQRNTTVPGSRLFFPAWDTTTAELPPMTA Mflv_1272|M.gilvum_PYR-GCK FAEGWHEEQLPDGTVIWTTPAGQRYSTVPGSRLFFPGWDTTTAELPPMAQ Mb3805|M.bovis_AF2122/97 FWTGWRDVQLPDGTIIWTAPNGHTYTTHPDSRIFLPSWHTTTAALPPAPS Rv3776|M.tuberculosis_H37Rv FWTGWRDVQLPDGTIIWTAPNGHTYTTHPDSRIFLPSWHTTTAALPPAPS MSMEG_5583|M.smegmatis_MC2_155 FWAGFVDTQLPDGQVVWTMPSGRTYTTVPGSRWVFPQWDTTTTTLPPPP- : : : :. : * . * MAV_3457|M.avium_104 DT-EHRCGERTAMMPLRRHTRAHNRAHRITTER---NHNRRTRLTTHPAT MUL_2679|M.ulcerans_Agy99 -----RSEATGSLRKPRRDDAQTRPNSRPKLGR---THCDRT-------- MMAR_5187|M.marinum_M DPPSDHCDQRSAMMPRRQRTRAQDRARRVATERRQNHHARSTQPGGQPRS MAB_4752|M.abscessus_ATCC_1997 -----HHTRQQARDRRRRTERNLNREQRLQREAALAALAAKD-------- TH_0334|M.thermoresistible__bu ---------PSARGLREAVPRQGVDPRRVSGQ------------------ Mvan_2144|M.vanbaalenii_PYR-1 --PPPD-PNRLAKMPKRRRTRAADTAARIKTEREHNATQR-ALESERATA Mflv_1272|M.gilvum_PYR-GCK --PPPD-PDRLAKMPKRRRTRAADHAARIKAEREDNAHQR-ALETERAAA Mb3805|M.bovis_AF2122/97 --PPAIGPTHTLLMPRRRRTRAAELAHRIKRERAHVTQRNKPPPSGGDTA Rv3776|M.tuberculosis_H37Rv --PPAIGPTHTLLMPRRRRTRAAELAHRIKRERAHVTQRNKPPPSGGDTA MSMEG_5583|M.smegmatis_MC2_155 --PRATSPARGVMMPQRKLTRAEQRARQIRAERARNEKYL----SERNKP . : MAV_3457|M.avium_104 PGPAPPPDPDDE--PPPF----- MUL_2679|M.ulcerans_Agy99 -----QPQHD------------- MMAR_5187|M.marinum_M AAPPTPPQSEPQSHPPPF----- MAB_4752|M.abscessus_ATCC_1997 --------------PPPF----- TH_0334|M.thermoresistible__bu ----------------------- Mvan_2144|M.vanbaalenii_PYR-1 VEHDRQAGRPPPTDYGDEPPPF- Mflv_1272|M.gilvum_PYR-GCK RRSGLPP--PAPPDYGDDPPPF- Mb3805|M.bovis_AF2122/97 VAEGFEP--PDGVSRLSLSRRVH Rv3776|M.tuberculosis_H37Rv VAEGFEP--PDGVSRLSLSRRVH MSMEG_5583|M.smegmatis_MC2_155 PPQ--------------------