For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTRPLRADAARNRARVLEVAYDTFAAEGLGVPIDEIARRAGVGAGTVYRHFPTKQALVVAVAEDRVRRIV DHARTLLAAEGPGEALFVFLRDMVRSAAADYGLVDALVGYGLDLEVAAPGAEAAFLATLGELLAAAQRAG TVRADVDVAVIKALLVVCKVPQVYDGEVSERVVRVIEDGLRVRSSV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0763 | - | - | 100% (186) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1492 | - | 2e-20 | 35.29% (187) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1060 | - | 2e-19 | 33.15% (181) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0068c | - | 2e-56 | 63.33% (180) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0142 | - | 5e-83 | 85.64% (181) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0067c | - | 2e-56 | 63.33% (180) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00316 | - | 8e-54 | 60.77% (181) | putative TetR/AcrR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0647 | - | 5e-59 | 64.64% (181) | transcriptional regulator TetR |
M. marinum M | MMAR_2062 | - | 3e-08 | 50.00% (54) | hypothetical protein MMAR_2062 |
M. avium 104 | MAV_2463 | - | 1e-16 | 34.92% (189) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0878 | - | 2e-53 | 60.89% (179) | transcriptional regulator |
M. thermoresistible (build 8) | TH_4110 | - | 9e-08 | 31.64% (177) | PUTATIVE putative transcriptional regulator, TetR family |
M. ulcerans Agy99 | MUL_3785 | - | 2e-06 | 27.56% (127) | putative regulatory protein |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0763|M.vanbaalenii_PYR-1 -----------MT---RPLRADAARNRAR-------VLEVAYDTFAAEGL Mflv_0142|M.gilvum_PYR-GCK -----------MT---RPLRADAARNRAR-------VLEVAYDTFAAEGL Mb0068c|M.bovis_AF2122/97 -----------MAPTDRRVRADAARNRAR-------VLEVAYQTFAADGL Rv0067c|M.tuberculosis_H37Rv -----------MAPTDRRVRADAARNRAR-------VLEVAYQTFAADGL MLBr_00316|M.leprae_Br4923 MSVPRSGLSVQMAQPARPLRADAARNRAR-------ILGVAYEAFATEGL MSMEG_0878|M.smegmatis_MC2_155 -----------MS-----MRADAARNRAR-------VLEVAYEAFAQDGL MAB_0647|M.abscessus_ATCC_1997 -----------MDQPARPLRADAARNRAR-------VLEVAYQTFAEEGL MAV_2463|M.avium_104 ----------MTAVEDRPLRSDAARNVER-------ILRAAREVYAELGP TH_4110|M.thermoresistible__bu ----------VTATDAAATGRAAARGRPRDPALDSAILDAALEIFVEQGI MUL_3785|M.ulcerans_Agy99 ----------MAASAPDEQTATPNRRSQQKSDRRLQLLSAAERLFAERGF MMAR_2062|M.marinum_M -----------MAIPEATTAAVPAR--ER-------ILGAAYDLFSRRGI . * : :* .* : * Mvan_0763|M.vanbaalenii_PYR-1 GVP-IDEIARRAGVGAGTVYRHFPTKQALVVAVAEDR---VRRIVDHART Mflv_0142|M.gilvum_PYR-GCK TVP-IDEIARRAGVGAGTVYRHFPTKEALVVAVAEDR---VRRIAERART Mb0068c|M.bovis_AF2122/97 SVP-VDEIARRAGVGAGTVYRHFPTKEALFQAVIADR---MHRIIDKGHA Rv0067c|M.tuberculosis_H37Rv SVP-VDEIARRAGVGAGTVYRHFPTKEALFQAVIADR---MHRIIDKGHA MLBr_00316|M.leprae_Br4923 SVP-IDEIARRAGVGAGTVYRHFPTKEALCAAVIGDR---MPHLVDDGYV MSMEG_0878|M.smegmatis_MC2_155 AVP-IDEIARRAGVGAGTVYRHFPSKEDLYRAVVAER---IREIVDQGQA MAB_0647|M.abscessus_ATCC_1997 GVP-IDEIARRAGVGAGTVYRHFPAKEDLYRAIAEDR---MGSVIDKGRE MAV_2463|M.avium_104 DAP-VEAVARRAGVGERTLYRRFPAKADLVRAALDQS---IAEDLTPVID TH_4110|M.thermoresistible__bu SALSIEQVARRAGVGKPTIYRRWSDKEQLVADAIEHR---VSAELAWPTP MUL_3785|M.ulcerans_Agy99 LAVRLEDIGAAAGISGPAIYRHFPNKESLLVELLVGI---SSRLLAGARQ MMAR_2062|M.marinum_M RAVGTDEVIERAGVARATLYRHFATKDDLVLAVLQRREELWTFGLIEQKS . : : **:. ::**::. * * Mvan_0763|M.vanbaalenii_PYR-1 LLAAEGPGEALFVFLRDM-VRSAAA--DYGLVDALVGYG-LDLEVAAPGA Mflv_0142|M.gilvum_PYR-GCK LLAVEGPGQALFVFFRDM-VRSAAV--DHGLVDALMNQG-LDLEAVAPGV Mb0068c|M.bovis_AF2122/97 LLKSKHPGDALFAFLRSMVLQWGAT--DRGLVEALAGVG-IEISSAAPEA Rv0067c|M.tuberculosis_H37Rv LLKSKHPGDALFAFLRSMVLQWGAT--DRGLVEALAGVG-IEISSAAPEA MLBr_00316|M.leprae_Br4923 LLKSAGPGEALFTYLRSLVLHWGAT--DRGLVDALAGAGGIDILGVAPDA MSMEG_0878|M.smegmatis_MC2_155 LLADGDPGEALFDYLRLMVLQCGAA--DRGLVEALAGAG-IDVKTMVPDA MAB_0647|M.abscessus_ATCC_1997 LLAAVDPGEALFEFLRSM-MDWGGT--DQGLVDALSGAG-IDVQALIPHI MAV_2463|M.avium_104 SARHAKDPLHGLTRLVEAAISLGAR--EQNLLAAAHRAG-----SLTSDI TH_4110|M.thermoresistible__bu AEASVSDPYELVRRNISAAARTAADPAFRGLIAAIYGSAVTHPALLRTYW MUL_3785|M.ulcerans_Agy99 VTTNSNDAAAALDGLIDFHLDFALG--EPDLIRIQDRDLGHLPAAAERQV MMAR_2062|M.marinum_M RARGNTPEEQLLAIFDVLHEWFQSR---DGYEGCSFINVLLELGADHPAG . . Mvan_0763|M.vanbaalenii_PYR-1 EAAFL---ATLGELLAAAQRAGTVRADVDVAVIK---ALLVVCKVPQVYD Mflv_0142|M.gilvum_PYR-GCK EAAFL---STLGDLLSAAQGAGTVRPDVDVAVVK---ALLVVCKVPQVFD Mb0068c|M.bovis_AF2122/97 EADFL---DLLTDLLRAAQRAGTVRPDVDVLEVK---TLLVGCQAMQSYN Rv0067c|M.tuberculosis_H37Rv EADFL---DLLTDLLRAAQRAGTVRPDVDVLEVK---TLLVGCQAMQSYN MLBr_00316|M.leprae_Br4923 EDAFL---TILSDLLYAAQYAGTARTDVGVREVK---SILVGCQAMEAYN MSMEG_0878|M.smegmatis_MC2_155 EDEYM---EMLGGLLRAAQRAGTVRGDVTATDVK---ALLVGCQAMQAYD MAB_0647|M.abscessus_ATCC_1997 EESFY---AVLGDLLRAAQQAGTVRSDVGVHEVK---ALLVGCQAMQSYN MAV_2463|M.avium_104 SVSLN---EALGELVREGQRAGRIRADLVADDLPRLVAMLYSVLSTMDAG TH_4110|M.thermoresistible__bu EHYILPRRTAAIALLRRARDLGTVAADADLDVLV---DMLAGAVTYRVLQ MUL_3785|M.ulcerans_Agy99 RKAQRQYVEIWVGVLR-QLDPGLAEADARLMAHAAFGLLNSTPHSMESAD MMAR_2062|M.marinum_M RACIGHIDHVRGIVRERAVAAGLHDVEDFAWSWHILMKGAIILAAVGDPD : * : Mvan_0763|M.vanbaalenii_PYR-1 GE-VSERVVRVIEDGLRVRSSV------------------- Mflv_0142|M.gilvum_PYR-GCK SE-VTERVTRVIEDGLRPLR--------------------- Mb0068c|M.bovis_AF2122/97 AE-LAAKVTDVALDGLRANRK-------------------- Rv0067c|M.tuberculosis_H37Rv AE-LAAKVTDVALDGLRANRK-------------------- MLBr_00316|M.leprae_Br4923 SA-LAERVTDVVVDGLRAAR--------------------- MSMEG_0878|M.smegmatis_MC2_155 AT-AAEHLTGVVFDGLRVAPASVPSR--------------- MAB_0647|M.abscessus_ATCC_1997 KD-VSRQVTDVVFDGLRPRP--------------------- MAV_2463|M.avium_104 SE-GWRRYVALVVDAISVDERRPLPPAAALRYASQPNSWPL TH_4110|M.thermoresistible__bu PE-PPSARQLRCYLEVAYRQVGLLP---------------- MUL_3785|M.ulcerans_Agy99 TKSACAPHSRAVMRAMTVAALTVDVGA-------------- MMAR_2062|M.marinum_M SARRAQRMAQVLIEQHRAAGAAAC-----------------