For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDLYRAIAEDRMG SVIDKGRELLAAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQALIPHIEESFYAVLGDLLRAAQ QAGTVRSDVGVHEVKALLVGCQAMQSYNKDVSRQVTDVVFDGLRPRP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0647 | - | - | 100% (187) | transcriptional regulator TetR |
M. abscessus ATCC 19977 | MAB_1873c | - | 4e-20 | 33.15% (184) | TetR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4384 | - | 3e-17 | 32.63% (190) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0068c | - | 2e-64 | 67.22% (180) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0142 | - | 2e-57 | 62.78% (180) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0067c | - | 2e-64 | 67.22% (180) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00316 | - | 2e-64 | 65.59% (186) | putative TetR/AcrR-family transcriptional regulator |
M. marinum M | MMAR_0489 | - | 2e-08 | 29.81% (161) | TetR family transcriptional regulator |
M. avium 104 | MAV_2463 | - | 4e-23 | 36.41% (195) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0878 | - | 1e-63 | 64.64% (181) | transcriptional regulator |
M. thermoresistible (build 8) | TH_1262 | - | 4e-09 | 36.90% (84) | transcriptional regulator, TetR family protein |
M. ulcerans Agy99 | MUL_1152 | - | 2e-08 | 29.81% (161) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0763 | - | 6e-59 | 64.64% (181) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0489|M.marinum_M ----------MPTVT--WARVDPARRAAIVEAAEAEFGAHGFSQGSLNVI MUL_1152|M.ulcerans_Agy99 ----------MPTVT--WARVDPARRAAIVEAAEAEFGAHGFSQGSLNVI MAV_2463|M.avium_104 ----------MTAVEDRPLRSDAARNVERILRAAREVYAELGPDAPVEAV Mb0068c|M.bovis_AF2122/97 -----------MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEI Rv0067c|M.tuberculosis_H37Rv -----------MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEI MLBr_00316|M.leprae_Br4923 MSVPRSGLSVQMAQPARPLRADAARNRARILGVAYEAFATEGLSVPIDEI MSMEG_0878|M.smegmatis_MC2_155 -----------MS-----MRADAARNRARVLEVAYEAFAQDGLAVPIDEI Mflv_0142|M.gilvum_PYR-GCK -----------MT---RPLRADAARNRARVLEVAYDTFAAEGLTVPIDEI Mvan_0763|M.vanbaalenii_PYR-1 -----------MT---RPLRADAARNRARVLEVAYDTFAAEGLGVPIDEI MAB_0647|M.abscessus_ATCC_1997 -----------MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEI TH_1262|M.thermoresistible__bu ---------MRTHGWGGSAPASDEEAIARILEAAKRTIEERGAEFSIADV . . : . .: : MMAR_0489|M.marinum_M ARRARVAKGSLFQYFADKRDLYAYIADIASQRVRTHIEGLIR-ELDSSRP MUL_1152|M.ulcerans_Agy99 ARRARVAKGSLFQYFADKRDLYAYIADIANQRVRTHIEGLIR-ELDSSRP MAV_2463|M.avium_104 ARRAGVGERTLYRRFPAKADLVRAALDQS------IAEDLTP-VIDSARH Mb0068c|M.bovis_AF2122/97 ARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLK-SKHPGDA Rv0067c|M.tuberculosis_H37Rv ARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLK-SKHPGDA MLBr_00316|M.leprae_Br4923 ARRAGVGAGTVYRHFPTKEALCAAVIGDRMPHLVDDGYVLLK-SAGPGEA MSMEG_0878|M.smegmatis_MC2_155 ARRAGVGAGTVYRHFPSKEDLYRAVVAERIREIVDQGQALLA-DGDPGEA Mflv_0142|M.gilvum_PYR-GCK ARRAGVGAGTVYRHFPTKEALVVAVAEDRVRRIAERARTLLA-VEGPGQA Mvan_0763|M.vanbaalenii_PYR-1 ARRAGVGAGTVYRHFPTKQALVVAVAEDRVRRIVDHARTLLA-AEGPGEA MAB_0647|M.abscessus_ATCC_1997 ARRAGVGAGTVYRHFPAKEDLYRAIAEDRMGSVIDKGRELLA-AVDPGEA TH_1262|M.thermoresistible__bu ARAVGVTRQTVYRYFPSTDALLVAAAMHAAGDFLDRLAVHLQGITDPVEA ** . * :::: *. . * . MMAR_0489|M.marinum_M FFEFLTDLLDGWVAYFAEHPRERALHAAATLEVDTDARISVRSVIHRHYL MUL_1152|M.ulcerans_Agy99 FFEFLTDLLDGWVAYFAEHPRERALHAAATLEVDTDARISVRSVIHRHYL MAV_2463|M.avium_104 AKDPLHGLTRLVEAAISLGAREQNLLAAAHRAGSLTSDISVS------LN Mb0068c|M.bovis_AF2122/97 LFAFLRSMVLQW------GATDRGLVEALAGVG-IEISSAAP-EAEADFL Rv0067c|M.tuberculosis_H37Rv LFAFLRSMVLQW------GATDRGLVEALAGVG-IEISSAAP-EAEADFL MLBr_00316|M.leprae_Br4923 LFTYLRSLVLHW------GATDRGLVDALAGAGGIDILGVAP-DAEDAFL MSMEG_0878|M.smegmatis_MC2_155 LFDYLRLMVLQC------GAADRGLVEALAGAG-IDVKTMVP-DAEDEYM Mflv_0142|M.gilvum_PYR-GCK LFVFFRDMVRS-------AAVDHGLVDALMNQG-LDLEAVAP-GVEAAFL Mvan_0763|M.vanbaalenii_PYR-1 LFVFLRDMVRS-------AAADYGLVDALVGYG-LDLEVAAP-GAEAAFL MAB_0647|M.abscessus_ATCC_1997 LFEFLRS-MMDW------GGTDQGLVDALSGAG-IDVQALIP-HIEESFY TH_1262|M.thermoresistible__bu VAEAIATTLEWLP-----EDTHIGLLVAPGRPT-AHTESVTSDVAIDFAN : . * * MMAR_0489|M.marinum_M EVLRPLVRDALARGDLRADSDTDALLSLLLMIFPHLALAPYMRGLDPILG MUL_1152|M.ulcerans_Agy99 EVLRPLVRDALARGDLRADSDTDALLSLLLMIFPHLALAPYMRGLDPILG MAV_2463|M.avium_104 EALGELVREGQRAGRIRADLVADDLPRLVAMLYS--VLSTMDAGSEGWRR Mb0068c|M.bovis_AF2122/97 DLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAELAAKVTDVA Rv0067c|M.tuberculosis_H37Rv DLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAELAAKVTDVA MLBr_00316|M.leprae_Br4923 TILSDLLYAAQYAGTARTDVGVREVKSILVGCQAMEAYNSALAERVTDVV MSMEG_0878|M.smegmatis_MC2_155 EMLGGLLRAAQRAGTVRGDVTATDVKALLVGCQAMQAYDATAAEHLTGVV Mflv_0142|M.gilvum_PYR-GCK STLGDLLSAAQGAGTVRPDVDVAVVKALLVVCKVPQVFDSEVTERVTRVI Mvan_0763|M.vanbaalenii_PYR-1 ATLGELLAAAQRAGTVRADVDVAVIKALLVVCKVPQVYDGEVSERVVRVI MAB_0647|M.abscessus_ATCC_1997 AVLGDLLRAAQQAGTVRSDVGVHEVKALLVGCQAMQSYNKDVSRQVTDVV TH_1262|M.thermoresistible__bu RMLRRFDVDWAAVGYSDADLDELAEHLLRVIQSFVIDPGRPPRDGQSLRA * : * * : MMAR_0489|M.marinum_M LDEPTPEQPALAVRRLVAVLTAAYSPSLTVEVRKVT MUL_1152|M.ulcerans_Agy99 LDEPTPEQPALAVRRLVAVLTAAYSPSLTVEVRKVT MAV_2463|M.avium_104 YVALVVDAISVDERRPLPPAAALRYASQPNSWPL-- Mb0068c|M.bovis_AF2122/97 LDGLRANRK--------------------------- Rv0067c|M.tuberculosis_H37Rv LDGLRANRK--------------------------- MLBr_00316|M.leprae_Br4923 VDGLRAAR---------------------------- MSMEG_0878|M.smegmatis_MC2_155 FDGLRVAPASVPSR---------------------- Mflv_0142|M.gilvum_PYR-GCK EDGLRPLR---------------------------- Mvan_0763|M.vanbaalenii_PYR-1 EDGLRVRSSV-------------------------- MAB_0647|M.abscessus_ATCC_1997 FDGLRPRP---------------------------- TH_1262|M.thermoresistible__bu YLRRWVGAAVTGAR----------------------