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M. gilvum PYR-GCK Mflv_1191 (-)

annotation: ECF subfamily RNA polymerase sigma-24 factor
coordinates: 1249092 - 1249922
length: 276

ITPSVFEATRPQLTAMAFRMLGSIHDAEDAVQSAWIKASITATDDLRNPAAYLTTVLTRECVDQLRMRQR
RREEPLAADMIPADTVAADEHYLRRESISRALMVVLDRLTPSQRVAYVLHDVFAVPFQEIAETLGTSPAS
AKKHASRARERIHRTVQIPAAATIDSAVVEAFLAAAAGGDTATMVALMADDCVRVADPTLLPAHTPAVVI
GDSAVADETSLFIDRIRVSAPMLVDGRTVHVIAPGGHELAVIDITVTDGRIARIEITRTHPSGRR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_1191--100% (276)ECF subfamily RNA polymerase sigma-24 factor
M. gilvum PYR-GCKMflv_4852-4e-3240.09% (222) RNA polymerase sigma factor SigJ
M. gilvum PYR-GCKMflv_1927-1e-2531.07% (280) ECF subfamily RNA polymerase sigma-24 factor

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3361csigJ6e-3243.00% (207) RNA polymerase sigma factor SigJ
M. tuberculosis H37RvRv3328csigJ6e-3243.00% (207) RNA polymerase sigma factor SigJ
M. leprae Br4923MLBr_01076sigE6e-1028.57% (140) RNA polymerase sigma factor SigE
M. abscessus ATCC 19977MAB_4733-1e-6653.88% (258) putative RNA polymerase sigma factor
M. marinum MMMAR_3687-8e-3838.46% (273) alternative RNA polymerase sigma factor SigJ-like protein
M. avium 104MAV_2475-7e-5647.25% (273) RNA polymerase sigma factor
M. smegmatis MC2 155MSMEG_1692-5e-3031.47% (251) ECF-family protein RNA polymerase sigma factor
M. thermoresistible (build 8)TH_1144-7e-2529.82% (275) RNA polymerase sigma factor, sigma-70 family protein
M. ulcerans Agy99MUL_3630-7e-3838.46% (273) alternative RNA polymerase sigma factor SigJ- like
M. vanbaalenii PYR-1Mvan_4710-1e-7455.72% (271) ECF subfamily RNA polymerase sigma-24 factor

CLUSTAL 2.0.9 multiple sequence alignment


Mb3361c|M.bovis_AF2122/97           -----------------MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQE
Rv3328c|M.tuberculosis_H37Rv        -----------------MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQE
MSMEG_1692|M.smegmatis_MC2_155      MDPAPSSASDPAWTELSEAEAVFTRVRPRLFGVAYRMTGTVAEAEDAVQE
TH_1144|M.thermoresistible__bu      -----VTVGSAAGAADGEHAERFTLLRPLLFTIAYEILGSATEADDVLQD
Mflv_1191|M.gilvum_PYR-GCK          ----------------MITPSVFEATRPQLTAMAFRMLGSIHDAEDAVQS
Mvan_4710|M.vanbaalenii_PYR-1       --------MTLDSFAQSAVHSAFLEGRPRLLSLAHRLLGSAHDAEDAVQT
MAB_4733|M.abscessus_ATCC_1997      ----------------MDLIEKFEAERPRLLSVAHRILGSRHDAEDAVQS
MAV_2475|M.avium_104                ---------MNAPRNLAELAQRFDDDRRHLRSVAFQLLGSLADADDAVQS
MMAR_3687|M.marinum_M               -------------MTDPALLARFQAARPRLGALAYRMLGSLADAEDVVQE
MUL_3630|M.ulcerans_Agy99           -------------MTDPALLARFQAARPRLGALAYRMLGSLADAEDVVQE
MLBr_01076|M.leprae_Br4923          ------MGDGIGMEREGRWTGNTQCPLRVVPGDESPTLDGRASPEDLIIT
                                                                 :        .   ..:* :  

Mb3361c|M.bovis_AF2122/97           AWLRWDSQD------TVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGT
Rv3328c|M.tuberculosis_H37Rv        AWLRWDSPD------TVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGT
MSMEG_1692|M.smegmatis_MC2_155      AWLRWQDTDR-----AAVTDPVPFLMTVVTRICLNVLQSARARHETYIGP
TH_1144|M.thermoresistible__bu      GYLRWSQVDL-----GTVRDTKAFLAQLITREALKVLRTRSRRREDYVGP
Mflv_1191|M.gilvum_PYR-GCK          AWIKASIT-----ATDDLRNPAAYLTTVLTRECVDQLRMRQRRREEPLAA
Mvan_4710|M.vanbaalenii_PYR-1       AWLRVAATP----GPRDIANPSAWLTTVVTRVCLDQLRDRSRRDVLSRRV
MAB_4733|M.abscessus_ATCC_1997      AWIRAQSA-----APNRVDNAPGWLTTVTARLCLDQLRARERHGEVPLTA
MAV_2475|M.avium_104                AWLKASRA-----DFAAVDNLSGWFTTITAREALDQLRARKRRAELPLAA
MMAR_3687|M.marinum_M               AWLRLNATTDRPQGAQELVNLDAWLTTVVARLCLNLLRDRRGRGREELVG
MUL_3630|M.ulcerans_Agy99           AWLRLNATTDRPEGAQELVNLDAWLTTVVARLCLNLLRDRRGRGREELVG
MLBr_01076|M.leprae_Br4923          NLLSPTIMS-----HPPPSRDDDWVEPFDALQGTAVFDATG---------
                                      :                    :.  . :      :             

Mb3361c|M.bovis_AF2122/97           WLPEPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGF
Rv3328c|M.tuberculosis_H37Rv        WLPEPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGF
MSMEG_1692|M.smegmatis_MC2_155      WLPEP---VDTTADPALGAERGAALELATLMLLERLAPPERAAYILREAF
TH_1144|M.thermoresistible__bu      WLPEPL--LLEDHDPESDVVLAESVSMAMLVLLETLSPDERAVFVLREVF
Mflv_1191|M.gilvum_PYR-GCK          -----DMIPADTVAADEHYLRRESISRALMVVLDRLTPSQRVAYVLHDVF
Mvan_4710|M.vanbaalenii_PYR-1       -----QPVQTVAYAADEEFLHREDVARALMVLLGRLTPAQRAAYVLHDLF
MAB_4733|M.abscessus_ATCC_1997      -----EHISDTQFAADEEFLRREEVSRAVLVVLDELSPKQRVAYVLHDLF
MAV_2475|M.avium_104                PEELDRLAVAASSPADEDTLLAESVSTALLVVLDRLSPAQRVAFVLHDVF
MMAR_3687|M.marinum_M               QLPDPIVDGVAAFDPEHHAMLADAVGLALFVVLDTLAPAERLAFVLHDVF
MUL_3630|M.ulcerans_Agy99           QLPDPIVDGVAAFDPEHHAMLADAVGLALFVVLDTLAPAERLAFVLHDVF
MLBr_01076|M.leprae_Br4923          ---------DKATMPSWEELVRQHAARVYWLAYRLSGNQHDAEDLTQETF
                                                  .            .  :        .    : :: *

Mb3361c|M.bovis_AF2122/97           AVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDP---AHNEV
Rv3328c|M.tuberculosis_H37Rv        AVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDP---AHNEV
MSMEG_1692|M.smegmatis_MC2_155      DYPYEQIAETVGVSVPNARQLVSRARRRVTTRR--AAPVATA---EQDRL
TH_1144|M.thermoresistible__bu      DFDYDEIAGAVGKSVPAVRQVAHRSREHVRARRKRFDPVPAA---QTTEL
Mflv_1191|M.gilvum_PYR-GCK          AVPFQEIAETLGTSPASAKKHASRARERIHRTVQIPAAAT-----IDSAV
Mvan_4710|M.vanbaalenii_PYR-1       AVPFDRVADILGVTPAGAKKHASRARARLRPVEPPSTGAPGD--AVDREV
MAB_4733|M.abscessus_ATCC_1997      AVPFGDIAAVLDTTAVSAKKLASRARARLGAADPERAREVG----SQLEI
MAV_2475|M.avium_104                AMPFETIAELLNRSPDAAKKLASRARARLHAAPAGPPRRDGHRIERHVEV
MMAR_3687|M.marinum_M               AVPFDQIAPILERTPEATRKLASRARRRIERAEPFPDRDLC----AQREV
MUL_3630|M.ulcerans_Agy99           AVPFDQIAPILERTPEATRKLASRARRRIERAEPFPDRDLC----AQREV
MLBr_01076|M.leprae_Br4923          IRVFRSVQN---YQPGTFEGWLHRITTNLFLDMVRRRARIR-----MDAL
                                       :  :           .    *    :                    :

Mb3361c|M.bovis_AF2122/97           VGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRF
Rv3328c|M.tuberculosis_H37Rv        VGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRF
MSMEG_1692|M.smegmatis_MC2_155      LRAFVTAARSGDLDALEEILAEDVVSHTDGNGARNAAQIPVVGRTTVAKF
TH_1144|M.thermoresistible__bu      AEEFIHAATTGDLDRLLSLLAPGATFTTDHGGKAPAVARPVEGAKKVANL
Mflv_1191|M.gilvum_PYR-GCK          VEAFLAAAAGGDTATMVALMADDCVRVADPTLLPAHTPAVVIGDSAVADE
Mvan_4710|M.vanbaalenii_PYR-1       VDAFLRAAGGGDIVRMVALMAPDAVRIVDPELLPTGTAAVVTGATAIAEE
MAB_4733|M.abscessus_ATCC_1997      VEAFLSAARGGDIERLITLMAPDVIRTVDHTLIPSGAATLVRGAQAVAEE
MAV_2475|M.avium_104                VQAFLAASRGGDIAALLQLLAADVLRTVDPVLVPADVPTALRGATRVAQE
MMAR_3687|M.marinum_M               VDAFFAAGRSGNFERLVSVLHPDVVLRGD--FGPNTPRFRAQGAATVAKL
MUL_3630|M.ulcerans_Agy99           VDAFFAAGRSGNFERLVSVLHPDVVLRGD--FGPNTPRFRAQGAATVAKL
MLBr_01076|M.leprae_Br4923          PDDYDRVPAD---EPNPEQIYHDSRLGPDLQAALDSLPPEFRAAVVLCDI
                                          .            :  .     *             .   :   

Mb3361c|M.bovis_AF2122/97           ILGLVQRYGPGLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRITAITV
Rv3328c|M.tuberculosis_H37Rv        ILGLVQRYGPGLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRITAITV
MSMEG_1692|M.smegmatis_MC2_155      VR-AFRNR---LWPGASLRWITANGHSAVLVVHDDS-----PAAFLTVAA
TH_1144|M.thermoresistible__bu      VMGFFRNRH--RVPDLRLEATNCNHAPAVLVYTGDH-----LEAVVLLEI
Mflv_1191|M.gilvum_PYR-GCK          TSLFIDRIR------VSAPMLVDGRTVHVIAPGGHE-----LAVIDITV-
Mvan_4710|M.vanbaalenii_PYR-1       TRHFADRIR------ASVRMRVSGREAHIIAPGGHP-----LGIIDIRC-
MAB_4733|M.abscessus_ATCC_1997      TRSFTDRIA------VAAILLIDGRVGAVIAPGGHP-----FALIRMDT-
MAV_2475|M.avium_104                TRRFAGRAR------AGAVMLIDGTPGIVIAARGRA-----QILLMIGIG
MMAR_3687|M.marinum_M               ARSYAGPER------TVLNALVNGAAGAVISISEQA-----SAVMGFLV-
MUL_3630|M.ulcerans_Agy99           ARSYAGPER------TVLNTLVNGAAGAVISISEQA-----SAVMRFLV-
MLBr_01076|M.leprae_Br4923          EGLSYEEIG------ATLGVKLGTVRSRIHRGRQ----------------
                                                                                      

Mb3361c|M.bovis_AF2122/97           RDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN------------
Rv3328c|M.tuberculosis_H37Rv        RDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN------------
MSMEG_1692|M.smegmatis_MC2_155      SADGIHRLLWVLAPEKLAGIAQAQGR------------------------
TH_1144|M.thermoresistible__bu      VDGAITNLYATRNPDKLAAVAAPRTITR----------------------
Mflv_1191|M.gilvum_PYR-GCK          TDGRIARIEITRTHPSGRR-------------------------------
Mvan_4710|M.vanbaalenii_PYR-1       SGGLITGITITPVCAADVLEPAAQPA------------------------
MAB_4733|M.abscessus_ATCC_1997      DGRLVTCIDIAPYTSGDAALSLIATAGSKVSYSPGESGRRIDPRGSGLPR
MAV_2475|M.avium_104                ADDRIHTIDITGDPERIRRAALALPPAVRFRNITT---------------
MMAR_3687|M.marinum_M               RNGRIAAIDVLADPQRIATLDISGLSGPGG--------------------
MUL_3630|M.ulcerans_Agy99           RNGRIAAIDVLADPQRIATLDISGLSGPGG--------------------
MLBr_01076|M.leprae_Br4923          ---ALRDYLLTAHPRDGATTDATHVKSA----------------------
                                        :                                             

Mb3361c|M.bovis_AF2122/97           ---
Rv3328c|M.tuberculosis_H37Rv        ---
MSMEG_1692|M.smegmatis_MC2_155      ---
TH_1144|M.thermoresistible__bu      ---
Mflv_1191|M.gilvum_PYR-GCK          ---
Mvan_4710|M.vanbaalenii_PYR-1       ---
MAB_4733|M.abscessus_ATCC_1997      VDH
MAV_2475|M.avium_104                ---
MMAR_3687|M.marinum_M               ---
MUL_3630|M.ulcerans_Agy99           ---
MLBr_01076|M.leprae_Br4923          ---