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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1144 | - | - | 100% (307) | RNA polymerase sigma factor, sigma-70 family protein |
| M. thermoresistible (build 8) | TH_1142 | - | e-112 | 66.12% (304) | RNA polymerase sigma factor, sigma-70 family protein |
| M. thermoresistible (build 8) | TH_0604 | sigG | 1e-16 | 28.84% (319) | PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3361c | sigJ | 3e-41 | 35.07% (288) | RNA polymerase sigma factor SigJ |
| M. gilvum PYR-GCK | Mflv_1927 | - | 1e-104 | 65.10% (298) | ECF subfamily RNA polymerase sigma-24 factor |
| M. tuberculosis H37Rv | Rv3328c | sigJ | 3e-41 | 35.07% (288) | RNA polymerase sigma factor SigJ |
| M. leprae Br4923 | MLBr_01076 | sigE | 2e-07 | 24.83% (145) | RNA polymerase sigma factor SigE |
| M. abscessus ATCC 19977 | MAB_4200 | - | 1e-109 | 67.01% (294) | putative sigma factor |
| M. marinum M | MMAR_4487 | - | 1e-103 | 62.59% (294) | alternative RNA polymerase sigma factor |
| M. avium 104 | MAV_1129 | - | 1e-106 | 64.43% (298) | sigma factor |
| M. smegmatis MC2 155 | MSMEG_6817 | - | 1e-100 | 63.73% (295) | RNA polymerase sigma factor, sigma-70 family protein |
| M. ulcerans Agy99 | MUL_3630 | - | 2e-29 | 30.00% (290) | alternative RNA polymerase sigma factor SigJ- like |
| M. vanbaalenii PYR-1 | Mvan_5347 | - | 1e-118 | 69.46% (298) | ECF subfamily RNA polymerase sigma-24 factor |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3361c|M.bovis_AF2122/97 ------------MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRW
Rv3328c|M.tuberculosis_H37Rv ------------MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRW
TH_1144|M.thermoresistible__bu VTVGSAAGAADGEHAERFTLLRPLLFTIAYEILGSATEADDVLQDGYLRW
Mvan_5347|M.vanbaalenii_PYR-1 ------MTASTDEHGERFTVLRPLLFTIAYEILGSATESEDVLQDSYLRW
MAB_4200|M.abscessus_ATCC_1997 -------MINSDEHAERFTLLRPLLFTIVYEILGSATESDDVLQDSYLRW
MSMEG_6817|M.smegmatis_MC2_155 ------MTARLDDHTERFTMLRPLLFTIAYEILGSVTEADDVLQDSYLNW
MMAR_4487|M.marinum_M ----MTPPSHSDEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRW
MAV_1129|M.avium_104 ---MMTQAPTGSEHADRFTLLRPLLFTIAYEMLGSATEADDVLQDSYLRW
Mflv_1927|M.gilvum_PYR-GCK -----MTAAPGDEHAERFTQLRPLLFTIAYEILGSATESDDVLQESYLRW
MUL_3630|M.ulcerans_Agy99 --------MTDPALLARFQAARPRLGALAYRMLGSLADAEDVVQEAWLRL
MLBr_01076|M.leprae_Br4923 -------------MGDGIGMEREGRWTGNTQCPLRVVPGD--------ES
: * : . . .: .
Mb3361c|M.bovis_AF2122/97 DSQD------TVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGTWLPEP
Rv3328c|M.tuberculosis_H37Rv DSPD------TVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGTWLPEP
TH_1144|M.thermoresistible__bu SQVDL-----GTVRDTKAFLAQLITREALKVLRTRSRRREDYVGPWLPEP
Mvan_5347|M.vanbaalenii_PYR-1 ADVDL-----ATVRDTKSYLAQLVTREALNALRARSRRREEYVGPWLPEP
MAB_4200|M.abscessus_ATCC_1997 AQVDL-----ATVRDTKSYLAQLVTRQALKALRTSVRRREDYIGPWLPEP
MSMEG_6817|M.smegmatis_MC2_155 AKVDL-----AAVRDTKSYLAQLVTRQALKAQRTSARRRESYVGPWLPEP
MMAR_4487|M.marinum_M AAVDL-----SAVRDTKSYLAQLVTRQSLNALRAGARRREEYVGPWLPEP
MAV_1129|M.avium_104 STVDL-----ATVRDTKSYLAQLVTRQALNALRAGARRREEYVGPWLPEP
Mflv_1927|M.gilvum_PYR-GCK AEVDL-----ATVTDTKAYLARLVTRQALNTLRAQSRRREDYVGPWLPEP
MUL_3630|M.ulcerans_Agy99 NATTDRPEGAQELVNLDAWLTTVVARLCLNLLRDRRGRGREELVGQLPDP
MLBr_01076|M.leprae_Br4923 PTLDG------RASPEDLIITNLLSPTIMSHPPPS--RDDDWVEPFDALQ
:: ::: :. * .
Mb3361c|M.bovis_AF2122/97 VVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGFAVPFA
Rv3328c|M.tuberculosis_H37Rv VVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGFAVPFA
TH_1144|M.thermoresistible__bu --LLLEDHDPESDVVLAESVSMAMLVLLETLSPDERAVFVLREVFDFDYD
Mvan_5347|M.vanbaalenii_PYR-1 --LLLDERDASADIVLAESVSMAMLVLLETLTPDERAVFVLREVFGFDYD
MAB_4200|M.abscessus_ATCC_1997 --LLLDEHDGSADVLLAESVSMAMLILLETLTPDERAVFVLREVFGFGYD
MSMEG_6817|M.smegmatis_MC2_155 --LLLDDRDASADVVLAESVSMAMLVVLETLTPDERAVFVLHDVFGFDYA
MMAR_4487|M.marinum_M --LLLDESDPSADLVLAESVSMAMLVLLETLTPDERAVFVLREVFGFDYD
MAV_1129|M.avium_104 --LLLDEQDPSTDVVLAESISMAMLVLLETLSPDERAVFVLREVFGFDYD
Mflv_1927|M.gilvum_PYR-GCK --LLT-EADPSADVVLAESVSMAMLVVLETLSPDERAVFVLREVFGFGHD
MUL_3630|M.ulcerans_Agy99 IVDGVAAFDPEHHAMLADAVGLALFVVLDTLAPAERLAFVLHDVFAVPFD
MLBr_01076|M.leprae_Br4923 -----------GTAVFDATGDKATMPSWEELVR-QHAARVYWLAYRLSGN
: * : : * :: . * : .
Mb3361c|M.bovis_AF2122/97 EVAEVLGTSEAAARQLASRARKAVTAQPALIS----GDPDPAHNEVVGRL
Rv3328c|M.tuberculosis_H37Rv EVAEVLGTSEAAARQLASRARKAVTAQPALIS----GDPDPAHNEVVGRL
TH_1144|M.thermoresistible__bu EIAGAVGKSVPAVRQVAHRSREHVRARRKRFD----PVPAAQTTELAEEF
Mvan_5347|M.vanbaalenii_PYR-1 EIAGAVGRSTQAVRQIAHRAKEHVHARRKRFG----PVDSRRTTQITEQF
MAB_4200|M.abscessus_ATCC_1997 EIAGAVSKSATAVRQIAHRAREHVHARRKRFD----PLDAKESTRIAEQF
MSMEG_6817|M.smegmatis_MC2_155 EISEAVGKSTAAVRQIAHRAREHVHARRKRFD----PVDSDQAAEITQQF
MMAR_4487|M.marinum_M EIADAVGKPAPTVRQVAHRARAHIQARRKKYG----DVDPQRNAQLTAQF
MAV_1129|M.avium_104 EIAEAVGKPAPTVRQVARRAREHVRARRKRHPGAGQAIDPKRNAELTAQF
Mflv_1927|M.gilvum_PYR-GCK EIAATLGKSTAAVRQIAHRAREHVQSRRKRFE----PVDPKTSGEITMTF
MUL_3630|M.ulcerans_Agy99 QIAPILERTPEATRKLASRARRRIERAEPFPD-----RDLCAQREVVDAF
MLBr_01076|M.leprae_Br4923 QHDAEDLTQETFIRVFRSVQNYQPGTFEGWLH------------RITTNL
: * . . .:. :
Mb3361c|M.bovis_AF2122/97 MAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGL
Rv3328c|M.tuberculosis_H37Rv MAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGL
TH_1144|M.thermoresistible__bu IHAATTGDLDRLLSLLAPGATFTTDHGGKAPAVARPVEGAKKVANLVMGF
Mvan_5347|M.vanbaalenii_PYR-1 LTAAATGDMEELVSMLAPGATWTADHGGKATAVRRPVVGARKVAAIMARV
MAB_4200|M.abscessus_ATCC_1997 LLATETGDVEGLMALLAPDATWIADGNGRAGAARRPLTGAGKLARIFAGP
MSMEG_6817|M.smegmatis_MC2_155 LTAASTGDMAGLVALLAPDVVTITDGGGLPGAARRPLVGAERVAGAIVRG
MMAR_4487|M.marinum_M LQTAASGDVEALMAMLAPDATWLADSGGKVSAARKPVVGAERVARAITGL
MAV_1129|M.avium_104 LATAASGDVEALMAMLAPDATWTADSGGVVSAARRPVVGAEKVARAITGL
Mflv_1927|M.gilvum_PYR-GCK FAAAATGDLDALMAMLAPDVVWTADSDGKVSAARRPVEGADKVARLILGF
MUL_3630|M.ulcerans_Agy99 FAAGRSGNFERLVSVLHPDVVLRGDFG--PNTPRFRAQGAATVAKLARSY
MLBr_01076|M.leprae_Br4923 FLDMVRRRARIRMDALPDDYDRVPADEPNPEQIYHDSRLGPDLQAALDSL
: : * . . :
Mb3361c|M.bovis_AF2122/97 VQRYGPGLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGK
Rv3328c|M.tuberculosis_H37Rv VQRYGPGLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGK
TH_1144|M.thermoresistible__bu FRNRHRVPDLRLEATNCNHAPAVLVYTG-------DHLEAVVLLEIVDGA
Mvan_5347|M.vanbaalenii_PYR-1 FQAVRKTPQMRLETAVYNSAPAVVVYTE-------DHLEGVLLFEVVDDK
MAB_4200|M.abscessus_ATCC_1997 FRKG--MADRRTEIVIANAAPAVAVYAG-------DALEVVITMEIADGK
MSMEG_6817|M.smegmatis_MC2_155 MRR-----DLRFEIVTANGAPAVALRTDE------DQLLGLVTLEIHDGR
MMAR_4487|M.marinum_M IRKAAT--ELQVELVTCNSAPAVLFYLG-------GQLEGVITLEIVGDK
MAV_1129|M.avium_104 FRKAAEYATLRVDTVTCNGAPAVLLYLG-------DRLEGVITVEIAADK
Mflv_1927|M.gilvum_PYR-GCK VRLAG--GEARVEPAFYNSAPALVLYTG-------DVLEGVVTFEVADGR
MUL_3630|M.ulcerans_Agy99 AGP-----ERTVLNTLVNGAAGAVISIS-------EQASAVMRFLVRNGR
MLBr_01076|M.leprae_Br4923 PPEFRAAVVLCDIEGLSYEEIGATLGVK--------LGTVRSRIHRGRQA
. .
Mb3361c|M.bovis_AF2122/97 VCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN
Rv3328c|M.tuberculosis_H37Rv VCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN
TH_1144|M.thermoresistible__bu ITNLYATRNPDKLAAVAAPRTITR----------
Mvan_5347|M.vanbaalenii_PYR-1 ITNLYAMRNPDKLTGITIPRKITR----------
MAB_4200|M.abscessus_ATCC_1997 ITRLYAVANPDKLVAAATTRMVSR----------
MSMEG_6817|M.smegmatis_MC2_155 ITSLYAIANPDKLAALDGPRVITR----------
MMAR_4487|M.marinum_M ITNFYVMRNPDKLTAVARAHEISRG---------
MAV_1129|M.avium_104 ITNFYVMRNPHKLAALATARDVSRG---------
Mflv_1927|M.gilvum_PYR-GCK ITNFYAMRNPEKLTGVMVARTISR----------
MUL_3630|M.ulcerans_Agy99 IAAIDVLADPQRIATLDISGLSGPGG--------
MLBr_01076|M.leprae_Br4923 LRDYLLTAHPRDGATTDATHVKSA----------
: .* .