For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TRQKILIAGASSGLGAGMARAFAARGRDLALCARRTDRLEELKSELAQKHPEITIAIAELDVNDHDQVPK VFAELRDELGGIDRVIVNAGIGKGAPLGSGKLWANKATIETNLVAALVQIETALEMFHKSGSGHLVLISS VLASKGVPGVKAAYAASKAGLSSLGESLRAEYDKSPITVSVMEPGYIESEMTAKSGSTMLMVDNETGVNA LVSAIEREPGRAAVPWWPWAPLVQLMRVLPPPIAKKFA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4417 | - | - | 100% (249) | short chain dehydrogenase |
M. ulcerans Agy99 | MUL_0819 | adh_1 | 3e-20 | 31.77% (192) | short-chain dehydrogenase Adh_1 |
M. ulcerans Agy99 | MUL_1491 | fabG1 | 2e-18 | 30.00% (190) | 3-oxoacyl- |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0970 | - | 1e-116 | 83.13% (249) | short chain dehydrogenase |
M. gilvum PYR-GCK | Mflv_1853 | - | 1e-105 | 75.10% (249) | short chain dehydrogenase |
M. tuberculosis H37Rv | Rv0945 | - | 1e-116 | 83.13% (249) | short chain dehydrogenase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 6e-17 | 29.47% (190) | 3-oxoacyl- |
M. abscessus ATCC 19977 | MAB_1039 | - | 2e-93 | 67.87% (249) | short chain dehydrogenase |
M. marinum M | MMAR_4558 | - | 1e-137 | 98.80% (249) | hypothetical protein MMAR_4558 |
M. avium 104 | MAV_1067 | - | 1e-122 | 87.55% (249) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5544 | - | 1e-108 | 77.91% (249) | short chain dehydrogenase |
M. thermoresistible (build 8) | TH_2552 | - | 8e-19 | 33.51% (188) | PUTATIVE putative short-chain dehydrogenase/reductase SDR |
M. vanbaalenii PYR-1 | Mvan_4881 | - | 1e-105 | 75.10% (249) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1853|M.gilvum_PYR-GCK ----MTRQKILITGASS-GLGAGMARQFAAKG--RDLALCARRLDNLDEL Mvan_4881|M.vanbaalenii_PYR-1 ----MTRQKILITGASS-GLGAGMARQFAAKG--RDLALCARRLDNLDEL MSMEG_5544|M.smegmatis_MC2_155 ----MTRQNILITGASS-GLGAGMARQFAARG--RNLALCARRTDRLEEL Mb0970|M.bovis_AF2122/97 MLTGVTRQKILITGASS-GLGAGMARSFAAQG--RDLALCARRTDRLTEL Rv0945|M.tuberculosis_H37Rv MLTGVTRQKILITGASS-GLGAGMARSFAAQG--RDLALCARRTDRLTEL MUL_4417|M.ulcerans_Agy99 ----MTRQKILIAGASS-GLGAGMARAFAARG--RDLALCARRTDRLEEL MMAR_4558|M.marinum_M ----MTRQKILITGASS-GLGAGMARAFAARG--RDLALCARRTDRLEEL MAV_1067|M.avium_104 MLPEMTRQKILITGASS-GLGAGMARAFAAKG--RDLALCARRADRLDEL MAB_1039|M.abscessus_ATCC_1997 ----MTRQKILITGASS-GLGAEMARQFAAKG--RDLALCARRTEALEEL TH_2552|M.thermoresistible__bu ---VLSDSVALITGASG-GIGRVLARRYAQRG--ARVALVARRRDELNVT MLBr_01807|M.leprae_Br4923 ----MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGH :: ::.*.. * ::* * :.* . * Mflv_1853|M.gilvum_PYR-GCK RTQLLADFPNIKVAVA--ALDVNDHEQVPKVFTELSDELGGIDCVIVNAG Mvan_4881|M.vanbaalenii_PYR-1 KAELLERYPDIKIAVA--ALDVNDHEQVPKVFNELSEELGGIDCVIVNAG MSMEG_5544|M.smegmatis_MC2_155 KAEIADRHPYIKVAIA--ALDVNDHEAVPRVFNELSEELGGIDRVIVNAG Mb0970|M.bovis_AF2122/97 KAELSQRYPDIKIAVA--ELDVNDHERVPKVFAELSDEIGGIDRVIVNAG Rv0945|M.tuberculosis_H37Rv KAELSQRYPDIKIAVA--ELDVNDHERVPKVFAELSDEIGGIDRVIVNAG MUL_4417|M.ulcerans_Agy99 KSELAQKHPEITIAIA--ELDVNDHDQVPKVFAELRDELGGIDRVIVNAG MMAR_4558|M.marinum_M KSELAQKHPEITIAIA--ELDVNDHDQVPKVFAELRDELGGIDRVIVNAG MAV_1067|M.avium_104 KAELSQRYPGITVAVA--ALDVNDHEQVPKVFAELSDELGGIDRVIVNAG MAB_1039|M.abscessus_ATCC_1997 KAELLGANPGIKVAVR--ALDVTNHESVPVVFGELRDELGGLDRVVVNAG TH_2552|M.thermoresistible__bu AAAVTEAGG--EALVL--VADIRDETQCADAVAATVARWGRLDVLVNNAA MLBr_01807|M.leprae_Br4923 RVAVTHRASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQGPVEVLVANAG : . *: :. .. . * :: :: **. Mflv_1853|M.gilvum_PYR-GCK IG-KGYPLGGGKMWANKATLETNLVAALVQIETALEMFKA-AGAGHLVLV Mvan_4881|M.vanbaalenii_PYR-1 IG-KGYPLGGGKLWANKATIETNLVAALVQIESALEIFKA-AGKGHLVLV MSMEG_5544|M.smegmatis_MC2_155 IG-KGWPLGEGKPWANKATLETNLVAGLVQIEAALEMFKK-AGGGHLVLI Mb0970|M.bovis_AF2122/97 IG-KGARLGSGKLWANKATIETNLVAALVQIETALDMFNQ-RGSGHLVLI Rv0945|M.tuberculosis_H37Rv IG-KGARLGSGKLWANKATIETNLVAALVQIETALDMFNQ-RGSGHLVLI MUL_4417|M.ulcerans_Agy99 IG-KGAPLGSGKLWANKATIETNLVAALVQIETALEMFHK-SGSGHLVLI MMAR_4558|M.marinum_M IG-KGAPLGSGKLWANKATIETNLVAALVQIETALEMFHK-SGSGHLVLI MAV_1067|M.avium_104 IG-KGAKLGSGKLWANKATIETNLVSALVQIETALEMFHK-NGSGHLVLI MAB_1039|M.abscessus_ATCC_1997 IA-KGWHLGGGKSWANIQTIETNLIGALVQIEAALALFKE-QGYGHLVLI TH_2552|M.thermoresistible__bu VPGSDQSVAEATVDNWNQVLATNLVAPMVLSREALCQAMIPAGSGNIQFL MLBr_01807|M.leprae_Br4923 IT-SDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIK-QRFGRYIFM : .. : . .: .** . : . * *. :: Mflv_1853|M.gilvum_PYR-GCK SSVLGNVGVPGFKAAYSASKAGVTSLGESLRAEYPSGPIKITVLEPGYIE Mvan_4881|M.vanbaalenii_PYR-1 ASVLGNVGVPGTKAAYSASKAGVISLGESLRSEYASGPIKITVLEPGYIE MSMEG_5544|M.smegmatis_MC2_155 SSVLGNTGVPGGKAAYCASKAGMTSLGESLRAEYDKGPIRVTVVEPGYIE Mb0970|M.bovis_AF2122/97 SSVLGVKGVPGVKAAYAASKAGVRSLGESLRAEYAQGPIRVTVLEPGYIE Rv0945|M.tuberculosis_H37Rv SSVLGVKGVPGVKAAYAASKAGVRSLGESLRAEYAQRPIRVTVLEPGYIE MUL_4417|M.ulcerans_Agy99 SSVLASKGVPGVKAAYAASKAGLSSLGESLRAEYDKSPITVSVMEPGYIE MMAR_4558|M.marinum_M SSVLASKGVPGVKAAYAASKAGLSSLGESLRAEYDKGPITVSVMEPGYIE MAV_1067|M.avium_104 SSVLGNKGVPGVKAAYAASKAGLSSLGESLRAEYAKGPIKVSVLEPGYIE MAB_1039|M.abscessus_ATCC_1997 SSVTAAKGLPGTKAAYAASKAGLSSLGESLRSEYARGPIKVSTIEPGYIQ TH_2552|M.thermoresistible__bu SSAAARNVAPG-KAHYAAAKLALSALGQTLALEVGGTGIRVNTLVVGSVE MLBr_01807|M.leprae_Br4923 GSVVGLSGVPG-QANYAASKSGLIGMARSLARELGSRSITANVVAPGFID .*. . ** :* *.*:* .: .:..:* * * ..: * :: Mflv_1853|M.gilvum_PYR-GCK SEMTAKSNSTMLMVDNETGVKAMVDAIE-KEKGRAVVPGWPWWPLVEVMK Mvan_4881|M.vanbaalenii_PYR-1 SEMTAKANKTMLMVDNETGVKAMVDAIE-KEKGRAVVPGWPWWPLVEVMK MSMEG_5544|M.smegmatis_MC2_155 SEMTAKANSTMLMVDNETGVRAMVEAIE-KEKGRAVVPRWPWAPLTQVMR Mb0970|M.bovis_AF2122/97 SEMTAKSASTMLMVDNATGVKALVAAIE-REPGRAAVPWWPWAPLVRLMW Rv0945|M.tuberculosis_H37Rv SEMTAKSASTMLMVDNATGVKALVAAIE-REPGRAAVPWWPWAPLVRLMW MUL_4417|M.ulcerans_Agy99 SEMTAKSGSTMLMVDNETGVNALVSAIE-REPGRAAVPWWPWAPLVQLMR MMAR_4558|M.marinum_M SEMTAKSGSTMLMVDNETGVNALVSAIE-REPGRAAVPWWPWAPLVQLMR MAV_1067|M.avium_104 SEMTAKSNSTMLMVDNETGVKALVAAME-REPGRAAVPWWPWAPLVQLMR MAB_1039|M.abscessus_ATCC_1997 TDLSAKSPTTPMMVDTLTGVTAMVNAIE-KEPGRAAVPRWPWEPVMAVMR TH_2552|M.thermoresistible__bu GELLDRYVARRAAADGVSPDEVLSGLARSTKLGRLISPEEVADVSLWLAS MLBr_01807|M.leprae_Br4923 TEMTRAMDSKYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGYISGAVI :: . : . . . Mflv_1853|M.gilvum_PYR-GCK LLPPRFTKYFA----- Mvan_4881|M.vanbaalenii_PYR-1 VLPPRFAKYFA----- MSMEG_5544|M.smegmatis_MC2_155 LLPPKYTKRFA----- Mb0970|M.bovis_AF2122/97 VLPPRLTRRFA----- Rv0945|M.tuberculosis_H37Rv VLPPRLTRRFA----- MUL_4417|M.ulcerans_Agy99 VLPPPIAKKFA----- MMAR_4558|M.marinum_M VLPPPLAKKFA----- MAV_1067|M.avium_104 VLPPRLTKMFA----- MAB_1039|M.abscessus_ATCC_1997 LLPPRLAGRLA----- TH_2552|M.thermoresistible__bu DAASAITGQDIFVTGG MLBr_01807|M.leprae_Br4923 PVDGGLGMGH------