For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2552 | - | - | 100% (256) | putative short-chain dehydrogenase/reductase SDR |
| M. thermoresistible (build 8) | TH_3268 | - | 5e-35 | 35.83% (254) | PUTATIVE short-chain dehydrogenase/reductase SDR |
| M. thermoresistible (build 8) | TH_4266 | - | 8e-32 | 35.43% (254) | PUTATIVE short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3560c | - | 5e-32 | 33.33% (258) | short chain dehydrogenase |
| M. gilvum PYR-GCK | Mflv_1530 | - | 6e-33 | 33.33% (258) | short chain dehydrogenase |
| M. tuberculosis H37Rv | Rv3530c | - | 5e-32 | 33.33% (258) | short chain dehydrogenase |
| M. leprae Br4923 | MLBr_02565 | fabG | 9e-18 | 32.30% (257) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. abscessus ATCC 19977 | MAB_0259c | - | 2e-31 | 32.94% (255) | short chain dehydrogenase |
| M. marinum M | MMAR_5018 | - | 2e-31 | 34.12% (255) | short-chain alcohol dehydrogenase |
| M. avium 104 | MAV_1391 | - | 1e-36 | 38.28% (256) | short-chain dehydrogenase/reductase SDR |
| M. smegmatis MC2 155 | MSMEG_5931 | - | 2e-33 | 34.88% (258) | short chain dehydrogenase |
| M. ulcerans Agy99 | MUL_4092 | - | 1e-27 | 34.02% (241) | short chain dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_5228 | - | 1e-32 | 33.33% (258) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1530|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5228|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5931|M.smegmatis_MC2_155 --------------------------------------------------
Mb3560c|M.bovis_AF2122/97 --------------------------------------------------
Rv3530c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_5018|M.marinum_M --------------------------------------------------
MUL_4092|M.ulcerans_Agy99 --------------------------------------------------
MAB_0259c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2552|M.thermoresistible__bu --------------------------------------------------
MAV_1391|M.avium_104 --------------------------------------------------
MLBr_02565|M.leprae_Br4923 MAPKCSSDLFSQIVSSGPGSFVAKQLGVPRPETLRRYRPSDAPLCGSLLI
Mflv_1530|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5228|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5931|M.smegmatis_MC2_155 --------------------------------------------------
Mb3560c|M.bovis_AF2122/97 --------------------------------------------------
Rv3530c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_5018|M.marinum_M --------------------------------------------------
MUL_4092|M.ulcerans_Agy99 --------------------------------------------------
MAB_0259c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2552|M.thermoresistible__bu --------------------------------------------------
MAV_1391|M.avium_104 --------------------------------------------------
MLBr_02565|M.leprae_Br4923 GGDGRLVEPLRATLEKDYDLVSNNLGGRWTDSFGGLVFDATGITAPAELK
Mflv_1530|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5228|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5931|M.smegmatis_MC2_155 --------------------------------------------------
Mb3560c|M.bovis_AF2122/97 --------------------------------------------------
Rv3530c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_5018|M.marinum_M --------------------------------------------------
MUL_4092|M.ulcerans_Agy99 --------------------------------------------------
MAB_0259c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2552|M.thermoresistible__bu --------------------------------------------------
MAV_1391|M.avium_104 --------------------------------------------------
MLBr_02565|M.leprae_Br4923 GLHNFFTPLLRNLGRCARVVVIGTTPDATTSTDERIAQRALEGFSRSLGK
Mflv_1530|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5228|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5931|M.smegmatis_MC2_155 --------------------------------------------------
Mb3560c|M.bovis_AF2122/97 --------------------------------------------------
Rv3530c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_5018|M.marinum_M --------------------------------------------------
MUL_4092|M.ulcerans_Agy99 --------------------------------------------------
MAB_0259c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2552|M.thermoresistible__bu --------------------------------------------------
MAV_1391|M.avium_104 --------------------------------------------------
MLBr_02565|M.leprae_Br4923 ELRRGATVALVYLSPDAKPAATGLESTMRFILSAKSAYVNGQVFYVGAAD
Mflv_1530|M.gilvum_PYR-GCK ---MSEALPLLENKVVVISGVGPALGTTLARRCAEAGADLVLAARTVERL
Mvan_5228|M.vanbaalenii_PYR-1 -----MAFGLLRDKVVVISGVGPALGTTLARRCAEEGADLVLAARTVERL
MSMEG_5931|M.smegmatis_MC2_155 ------MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL
Mb3560c|M.bovis_AF2122/97 ------MTGMLKRKVIVVSGVGPGLGTTLAHRCARDGADLVLAARSAERL
Rv3530c|M.tuberculosis_H37Rv ------MTGMLKRKVIVVSGVGPGLGTTLAHRCARDGADLVLAARSAERL
MMAR_5018|M.marinum_M ------MPGLLDGKTLVISGVGPGLGTTLAHRCAAEGADLVLAARSGDRL
MUL_4092|M.ulcerans_Agy99 --------------------MGPGLGTTLAHRCAAEGADLVLAARIGDRL
MAB_0259c|M.abscessus_ATCC_199 ------MTGLLSGKTVVISGVGTGLGREVALKAHQDGANVVLGARTRENL
TH_2552|M.thermoresistible__bu ---------VLSDSVALITGASGGIGRVLARRYAQRGARVALVARRRDEL
MAV_1391|M.avium_104 ----MSDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPL
MLBr_02565|M.leprae_Br4923 STPPTNWDRPLENKVAIVTGAARGIGAAIAEVVARDGARVVAIDVES-AA
. .:* * ** :.
Mflv_1530|M.gilvum_PYR-GCK EDVATQITDLGRRAVSVGTDITDEAQVANLVEESLKAYGKVDVLINNAFR
Mvan_5228|M.vanbaalenii_PYR-1 DDVARQITDLGRRAVSVGTDITDEAQVNNLVDESLKAYGKVDVLINNAFR
MSMEG_5931|M.smegmatis_MC2_155 EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFR
Mb3560c|M.bovis_AF2122/97 DDVAKQIIDTGRRAVAVRTDITDDDDVSNLVQATLAAYGKADVLINNAFR
Rv3530c|M.tuberculosis_H37Rv DDVAKQIIDTGRRAVAVRTDITDDDDVSNLVQATLAAYGKADVLINNAFR
MMAR_5018|M.marinum_M DELAKQIIDKGRQAIAVRADITDDDQVSNLVDATLEAYGKIDVLVNNAFR
MUL_4092|M.ulcerans_Agy99 DELAKQIIDKGRQAIAVRADITDDDQVSNLVDATLEAYGKIDVLVNNAFR
MAB_0259c|M.abscessus_ATCC_199 ERLTTELDDTGGSATWAVTDITDATACQGLIDTAVKRFGAVDALVNVAAK
TH_2552|M.thermoresistible__bu NVTAAAVTEAGGEALVLVADIRDETQCADAVAATVARWGRLDVLVNNAAV
MAV_1391|M.avium_104 QATAKEVEALGRRSLIVPTDVTETQQCQHLVDATMAEFGRLDILVNNAGG
MLBr_02565|M.leprae_Br4923 EALDETANRVGG--TTLSLDVTADDAVDKITEHLHDYQGGHADILVNNAG
: * *: * ::
Mflv_1530|M.gilvum_PYR-GCK VPSMKPFANTTFEHMRDAIELTVFG--ALRMVQAFTPALAEANGAVVNVN
Mvan_5228|M.vanbaalenii_PYR-1 VPSMKPFADTTFEHMRDAIELTVFG--ALRMVQAFSPALAEANGAVVNVN
MSMEG_5931|M.smegmatis_MC2_155 VPSMKPFANTTFEHMRDAIELTVFG--ALRLIQGFTPALEESKGAVVNVN
Mb3560c|M.bovis_AF2122/97 VPSMKPLAGTTFEHIRDAIELSALG--TLRLIQAFTPALAQSHGAIVNVN
Rv3530c|M.tuberculosis_H37Rv VPSMKPLAGTTFEHIRDAIELSALG--TLRLIQAFTPALAQSHGAIVNVN
MMAR_5018|M.marinum_M VPSMKPLAETTFQHIRDAIELSALG--ALRVIAGFTRALAETNGSIVNVN
MUL_4092|M.ulcerans_Agy99 VPSMKPLAETTFQHIRDAIELSALG--ALRVIAGFTRALAETNGSIVNVN
MAB_0259c|M.abscessus_ATCC_199 EDVFGGIEGADLAQWQAMLNTNVVG--TLQLVQAAVPELKKKGGSVVFIG
TH_2552|M.thermoresistible__bu PGSDQSVAEATVDNWNQVLATNLVAPMVLSREALCQAMIPAGSGNIQFLS
MAV_1391|M.avium_104 -GETKGITRWTEEEWHDVVDLNLGS-VWFLSRCAVKPMMTQGSGAIVNIS
MLBr_02565|M.leprae_Br4923 ITRDKLLANMDDCRWDAVLEVNLLAPQRLTEGLVGNGSISKG-GRVIVLS
. . : . . : : * : :.
Mflv_1530|M.gilvum_PYR-GCK SMVVRHSQAKYGAYKMAKSALLAMSQTLATELGDQGIRVNSVLPGYIWGG
Mvan_5228|M.vanbaalenii_PYR-1 SMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEQGIRVNSVLPGYIWGG
MSMEG_5931|M.smegmatis_MC2_155 SMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGG
Mb3560c|M.bovis_AF2122/97 SMVIRHSQPKYGTYKMAKSVLLAMSHSLATELGEQGIRVNSVAPGYIWGD
Rv3530c|M.tuberculosis_H37Rv SMVIRHSQPKYGTYKMAKSVLLAMSHSLATELGEQGIRVNSVAPGYIWGD
MMAR_5018|M.marinum_M SMVLRHSQPKFGAYKMAKSTLLAMSHSLAAELGVKGIRVNSVAPGYIWGD
MUL_4092|M.ulcerans_Agy99 SMVLRHSQPKFGADKTAKSTLLAMSHSLAAELGVKGIWVNSVAPGYIWGD
MAB_0259c|M.abscessus_ATCC_199 SQSAFHPQLPQSAYATSKGALQNAMYQLAKELGPHKIRLNMVVPTWMYGP
TH_2552|M.thermoresistible__bu SAAARNVAPGKAHYAAAKLALSALGQTLALEVGGTGIRVNTLVVGSVEGE
MAV_1391|M.avium_104 SGASLIAMPQAAIYAAAKAGVNNLTGSMAAAWGRKGIRVNCIACGAIR--
MLBr_02565|M.leprae_Br4923 SMAGIAGNRGQTNYATAKAGVIGLTQALAPGLAEKGITINAVAPGFIETQ
* :* : :* . * :* : :
Mflv_1530|M.gilvum_PYR-GCK TLESYFSHQAGKYGTTVDEIYKATAAASDLKRLPTEDEVASAILFMACDL
Mvan_5228|M.vanbaalenii_PYR-1 TLESYFTHQAGKYGTTVEEIYKATAAASDLKRLPTEDEVASAILFMASDL
MSMEG_5931|M.smegmatis_MC2_155 TLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL
Mb3560c|M.bovis_AF2122/97 TLKSYFDHQAGKYGTTVDQIYQATAANSDLKRLPTEDEVASAILFLASDL
Rv3530c|M.tuberculosis_H37Rv TLKSYFDHQAGKYGTTVDQIYQATAANSDLKRLPTEDEVASAILFLASDL
MMAR_5018|M.marinum_M TLQGYFEHQAGKYGTTVEQIYQATAAQSDLKRLPTEDEVASAILFMASDL
MUL_4092|M.ulcerans_Agy99 TLQGYFEHQAGKYGTTVEKIYQATAAQSDLKRLPTEDEVASAVLFMASDL
MAB_0259c|M.abscessus_ATCC_199 PIQLYIGLVAQQRGITQEEVLAELTAKFPLGEMPADEDVADAVVFFVSDR
TH_2552|M.thermoresistible__bu LLDRYVARRAAADGVSPDEVLSGLARSTKLGRLISPEEVADVSLWLASDA
MAV_1391|M.avium_104 --TDGLLADAAKGGFDVD----QLGAMNAMGRIAEPDEIGYGVLFFASDA
MLBr_02565|M.leprae_Br4923 MTAAIPLATREVG-----------RRLNSLLQGGLPVDVAETIAYFAIPA
: . ::. ::.
Mflv_1530|M.gilvum_PYR-GCK SSGITGQALDVNCGEFKA--
Mvan_5228|M.vanbaalenii_PYR-1 SSGITGQALDVNCGEFKA--
MSMEG_5931|M.smegmatis_MC2_155 ASGITGQALDVNCGEYKA--
Mb3560c|M.bovis_AF2122/97 ASGITGQTLDVNCGEYHT--
Rv3530c|M.tuberculosis_H37Rv ASGITGQTLDVNCGEYHT--
MMAR_5018|M.marinum_M SSGITGQTLDVNCGEYHT--
MUL_4092|M.ulcerans_Agy99 SSGITGQTLDVNCGEYHT--
MAB_0259c|M.abscessus_ATCC_199 ARMVTGQTLFVNGGEFFR--
TH_2552|M.thermoresistible__bu ASAITGQDIFVTGG------
MAV_1391|M.avium_104 SSYCSGQTLYIHGGPGPAGI
MLBr_02565|M.leprae_Br4923 SNAVTGNVIRVCGQAMLGA-
: :*: : :