For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VKSRELSPRVRDLIREAARVALNPSQQWLEEFDRATLATAPPIAENPDLATVISRANRANLRHFAASNLR NPGDPVPANLGAEPLRMARDLVRLGLDTLALDVYRVGQNVAWQRWTDIVFGLTTDPQELRELLDVPFRSA VAFIDTTLAGIAAQMELEHHELSRNICAERRRIVELLLNGAPISRDSAESRLGYPLDRSHTAAIIWSDRP NGDHRDLDRAVDAFCNAVGCASSLAIMSAATTRWVWVRDVDVFDCSHIRQVMRELPHVRIAIGTTEPGVD GFRRSRRDALTAARMLIRLRSPQQVAFFGDVEMIALLTENPDGADEFIKNTLGDFE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1854 | - | - | 100% (336) | transcriptional activator protein |
M. ulcerans Agy99 | MUL_3245 | - | e-114 | 57.40% (331) | transcriptional regulator |
M. ulcerans Agy99 | MUL_0944 | - | e-107 | 57.58% (330) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1488 | - | 1e-134 | 66.96% (336) | transcriptional activator protein |
M. gilvum PYR-GCK | Mflv_4621 | - | 2e-09 | 25.63% (199) | hypothetical protein Mflv_4621 |
M. tuberculosis H37Rv | Rv1453 | - | 1e-134 | 66.96% (336) | transcriptional activator protein |
M. leprae Br4923 | MLBr_01052 | - | 1e-105 | 54.85% (330) | hypothetical protein MLBr_01052 |
M. abscessus ATCC 19977 | MAB_2657c | - | 6e-46 | 33.23% (334) | hypothetical protein MAB_2657c |
M. marinum M | MMAR_2258 | - | 0.0 | 98.21% (336) | transcriptional activator protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3143 | - | 4e-17 | 26.77% (325) | PUTATIVE putative conserved hypothetical protein |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1854|M.ulcerans_Agy99 ----------------MKSRELSPRVRDLIREAARVALNPSQQWLEEFDR MMAR_2258|M.marinum_M ----------------MKSRELSPRVRDLIREAARVALNPSQQWLEEFDR Mb1488|M.bovis_AF2122/97 ----------------MALRETSPRIHELIREAARIALNPTQEWLDEFDR Rv1453|M.tuberculosis_H37Rv ----------------MALRETSPRIHELIREAARIALNPTQEWLDEFDR MLBr_01052|M.leprae_Br4923 ----------------MARQHPSPRVRELIREGARIALNPTQEWIDQLDR MAB_2657c|M.abscessus_ATCC_199 MNEGSERVHTQSMTPDQLWPDASEPVRRLIRELAEKMLARSGEVAGDLTA Mflv_4621|M.gilvum_PYR-GCK ---------------MLDSSEVQDTPGHAVHHLFRDLGDLVRELPESIHG TH_3143|M.thermoresistible__bu ---------------VVVSGYNADDISSTVALIVDRLLENSGEDVERIQR : : : MUL_1854|M.ulcerans_Agy99 ATLATA--PPIAENPDLATVISRANRANLRHFAASNLRNPGDPVPANLGA MMAR_2258|M.marinum_M ATLAAA--PPIAENPDLATVISRANRANLRHFAASNLRNPGDPVPANLGA Mb1488|M.bovis_AF2122/97 AILAAN--PSIAADPALATVVKRSNRAHLIHFAAANLRNPGAPVPANLGP Rv1453|M.tuberculosis_H37Rv AILAAN--PSIAADPALATVVKRSNRAHLIHFAAANLRNPGAPVPANLGP MLBr_01052|M.leprae_Br4923 ATFAAN--PAIANDPVLAKVVRRASRAHLVHWATANLRDPGAPVPAHLGP MAB_2657c|M.abscessus_ATCC_199 ASLEDPRYRTIADDPVIAEVDARLTVSNLKHWLTSNISEPGHRVRPATGS Mflv_4621|M.gilvum_PYR-GCK LLIEQV--AELAADQQLKELLSDTVAANVDTWFSV-VRHSIPFDRMESPT TH_3143|M.thermoresistible__bu RILADI--DELRSDPRLVELLRSSVAGNVETVLTV-IRYGIDLDRVEPPT : : : : : .:: : : . MUL_1854|M.ulcerans_Agy99 EPLRMARDLVRLGLDTLALD-VYRVGQNVAWQRWTDIVFGLTTDPQELRE MMAR_2258|M.marinum_M EPLRMARDLVRLGLDTLALD-VYRVGQNVAWQRWTDIVFGLTTDPQELRE Mb1488|M.bovis_AF2122/97 EPLRMARDLVRVGLDALALD-IYRIGQNVAWRRWTDIAFGLTSDPDELHE Rv1453|M.tuberculosis_H37Rv EPLRMARDLVRVGLDALALD-IYRIGQNVAWRRWTDIAFGLTSDPDELHE MLBr_01052|M.leprae_Br4923 EPLTMARDLVRRGRDVLALD-IYRVGQYTAWRRWMEIAFTLTSDPQELRE MAB_2657c|M.abscessus_ATCC_199 AMRTYARDVVLRGLTTDDIQ-SWRAVQRVGWKWWLAACFQVTDDKEQLCE Mflv_4621|M.gilvum_PYR-GCK AALEHARRMAQREVPVNALLRAYRLGHQYGLNLIIAGLRSADLPPEEKLA TH_3143|M.thermoresistible__bu AALEYARRAAQHGIALSALIRAYRLGQQEMLERILREVRETELDPDLRLS ** . : :* : . : MUL_1854|M.ulcerans_Agy99 LLDVPFRSAVAFIDTTLAGIAAQMELEHHELSRNICAERRRIVELLLNGA MMAR_2258|M.marinum_M LLDVPFRSAAAFIDTTLAGIAAQMELEHHELSRNICAERRRIVELLLNGA Mb1488|M.bovis_AF2122/97 LLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAERRKIVQLLIDGA Rv1453|M.tuberculosis_H37Rv LLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAERRKIVQLLIDGA MLBr_01052|M.leprae_Br4923 ILNVSAQSINEYVAATLEAIATHMQLERDELTRSTHAERLEVVDLILEGA MAB_2657c|M.abscessus_ATCC_199 LIEVTSNSLTTFVDDSIAELAEHVRRVREELAGGSQLQRYATVELLLQGA Mflv_4621|M.gilvum_PYR-GCK LIEHITRVSFRYIDWMSEQVLETYQTERAEWDERRRSLRAQAIRDILNGR TH_3143|M.thermoresistible__bu VYERISSTSFAYIDWISQQVSDTYDTERERWLEHRNNIRAVRVREILDSD : : :: : : . * : :::. MUL_1854|M.ulcerans_Agy99 P-ISRDSAESRLGYPLDRSHTAAIIWSDR----PNGDHRDLDRAVDAFCN MMAR_2258|M.marinum_M P-ISRDSAESRLGYPLDRSHTAAIIWSDR----SDGDHRDLDRAVDAFCN Mb1488|M.bovis_AF2122/97 P-ISREHAEARLGYPLDRSHTAAVIWGDQ----AQGDHSHLDRVADAFGH Rv1453|M.tuberculosis_H37Rv P-ISREHAEARLGYPLDRSHTAAVIWGDQ----AQGDHSHLDRVADAFGH MLBr_01052|M.leprae_Br4923 P-VTQERAEARLGYRLGLTHTAAVIWSDD----LDGDHGYLDQAAEAFSH MAB_2657c|M.abscessus_ATCC_199 D-IAPARAEAQLGYALTGSHIGAVVWVD-----SEKEIAALERASEQVMR Mflv_4621|M.gilvum_PYR-GCK D-VDLTEASSAMRYFLGATHVALMVWLDRDAGADTDEFIAMERFMQHAVS TH_3143|M.thermoresistible__bu EPIDIDTASAALGYPLRGRHLALVLWMTR-SDLPGGELLRLERFARAVAE : *.: : * * * . ::* : ::: MUL_1854|M.ulcerans_Agy99 AVGCASSLAIMSAATTR---WVWVRDVDVFDCSHIRQVMRELP-HVRIAI MMAR_2258|M.marinum_M AVGCASSLAIMSAATTR---WVWVRDVDVFDCSRIRQVMRELP-HVRIAI Mb1488|M.bovis_AF2122/97 AGGCPHPLVVVAGAATR---WVWVKDAPGFDIDLIHEVLHDIP-DARIAI Rv1453|M.tuberculosis_H37Rv AGGCPHPLVVVAGAATR---WVWVKDAPGFDIDLIHEVLHDIP-DARIAI MLBr_01052|M.leprae_Br4923 VVESTQQLIVVASAATR---WVWLADALALDVPEVQKALLNLS-KARVAI MAB_2657c|M.abscessus_ATCC_199 ACGADRRLTVVAGTVAL---WLWIPAKTTPTVAVLMDSLGRRS-GVRVAL Mflv_4621|M.gilvum_PYR-GCK ATGAKQS-VYFSIDRLVGCAWMTV-HRPSDYLSQLRDFVRAQPDGPRLSV TH_3143|M.thermoresistible__bu AFQLRNTPLFVAEDTVSGWAWLAINHVVTEPVRTIRELAETADNGVHVAL . .: *: : : . :::: MUL_1854|M.ulcerans_Agy99 GTTEPGVDGFRRSRRDALTAARMLIRLR--SPQQVAFFGD--VEMIALLT MMAR_2258|M.marinum_M GTTEPGVDGFRRSHRDALTAARMLIRLR--SPQQVAFFGD--VEMIALLT Mb1488|M.bovis_AF2122/97 GATAPGIEGFRRSHRDALTTARMIIRLE--SPHRVAFFTD--VEMVALLT Rv1453|M.tuberculosis_H37Rv GATAPGIEGFRRSHRDALTTARMIIRLE--SPHRVAFFTD--VEMVALLT MLBr_01052|M.leprae_Br4923 GTSSAGIEGFRRSHLEALTAQRTLARLK--SHQQVAFFAD--VQLVSLIT MAB_2657c|M.abscessus_ATCC_199 GRAATGMAGFRRTHMDAAAAQRLLARLG--SPLSVVRYED--VHLMDLLS Mflv_4621|M.gilvum_PYR-GCK GEPLPGIEGFRRTYRQAEQARVVAVAADGSSRHRIVAARDPGVALASMLM TH_3143|M.thermoresistible__bu GTVDDGLEGFRRSHRRARDARKVAAAS--AIPPRITAADDYGISVSALLT * *: ****: * : :. * : : :: MUL_1854|M.ulcerans_Agy99 ENPDGADEFIKNTLGDFE-------------------------------- MMAR_2258|M.marinum_M ENPDGADEFIKNTLGDFEEASP---ALQHTLLTFISQQCNASRAARLLYT Mb1488|M.bovis_AF2122/97 ENAEGADDFIQRTLGNLESASP---ALKTTLLTFINQQCNASRAARLLFT Rv1453|M.tuberculosis_H37Rv ENAEGADDFIQRTLGNLESASP---ALKTTLLTFINQQCNASRAARLLFT MLBr_01052|M.leprae_Br4923 QNPEDAKEFITSTLGDFESASP---ALQQTLLTFINEQCNASRAAKRLFT MAB_2657c|M.abscessus_ATCC_199 ADPASADQFVTDVLGEFQSASP---VLHQTVLTYVEEALNRTSTAERLYT Mflv_4621|M.gilvum_PYR-GCK TDDATLKEWIHDVLGPLAQNTASDQRLRDTLRVFLRAGSSFKAAANELQI TH_3143|M.thermoresistible__bu ENLADTRRWVLDTLGPLASDTANDARLRETLLVFLHVGSSYTAAAERLLL : :: .** : MUL_1854|M.ulcerans_Agy99 -------------------------------------------------- MMAR_2258|M.marinum_M HRNTLMHRLETAQRLLPKPLEDTTVRVAVALEVLQWRSKQPGNPAASGAG Mb1488|M.bovis_AF2122/97 HRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKQTSDPPAKKES Rv1453|M.tuberculosis_H37Rv HRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKPTSDPPAKKES MLBr_01052|M.leprae_Br4923 HRNTLLRRIESAEKLLPRPLDHTSVHIAVALEALQWRGDQTNTSGPRAGR MAB_2657c|M.abscessus_ATCC_199 HRNTIDRRLARVDELLPKPFARNPIEVAAALTLLRVRAGR---------- Mflv_4621|M.gilvum_PYR-GCK HANTVKYRVNRALERRGRPIAAERLDVEVALLMCYWLGEVALNPTQALGR TH_3143|M.thermoresistible__bu HPNSVRYRVNRAVERRARPIGEDRLEVELALLACRHFQQAVLQPAD---- MUL_1854|M.ulcerans_Agy99 ------------ MMAR_2258|M.marinum_M KPDDRTPPEQRP Mb1488|M.bovis_AF2122/97 NGTKMR------ Rv1453|M.tuberculosis_H37Rv NGTKMR------ MLBr_01052|M.leprae_Br4923 NDGVPA------ MAB_2657c|M.abscessus_ATCC_199 ------------ Mflv_4621|M.gilvum_PYR-GCK S----------- TH_3143|M.thermoresistible__bu ------------