For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PGMTSIEGKVRFGVGLGADTTPEDLPGIVDYLESSGADSVWFSELVYSPAVDPFIGMAYTLSRTTRLKAG TSVAILPGRHPVLVAKQVASLAALAPRRVLPAFGLHSALTAERDVFTVPRGRRGAVFDESLELLNAVLRG RDVSFDGEFFKVRSANVQPVPAKPVDIWLGGSGPVALARIGRLADGWLGSFLTPVEAGAARRTIEREAQA AGREIEPDHYGISLAVAAGDIPDDVYDMARRRRPEVDPAELIAADWPTLHRRIDAYVDAGLTKFVVRPVG SGDREAFLERFVGELLPRQN*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3544 | - | - | 100% (301) | hypothetical protein MSMEG_3544 |
M. smegmatis MC2 155 | MSMEG_2811 | - | 4e-23 | 30.21% (288) | hydride transferase 1 |
M. smegmatis MC2 155 | MSMEG_4820 | - | 1e-20 | 37.68% (138) | hypothetical protein MSMEG_4820 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0965c | - | 1e-18 | 34.09% (176) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_3246 | - | 1e-108 | 65.41% (292) | luciferase family protein |
M. tuberculosis H37Rv | Rv0940c | - | 1e-18 | 34.09% (176) | oxidoreductase |
M. leprae Br4923 | MLBr_00269 | - | 5e-13 | 25.37% (272) | putative F420-dependent glucose-6-phosphate dehydrogenase |
M. abscessus ATCC 19977 | MAB_3792 | - | 4e-15 | 28.80% (316) | luciferase-like protein |
M. marinum M | MMAR_5009 | - | 2e-20 | 31.84% (201) | oxidoreductase |
M. avium 104 | MAV_2830 | - | 1e-111 | 67.12% (292) | hypothetical protein MAV_2830 |
M. thermoresistible (build 8) | TH_3799 | - | 4e-18 | 28.80% (250) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4083 | - | 3e-20 | 31.84% (201) | oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_5752 | - | 3e-18 | 33.33% (165) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3246|M.gilvum_PYR-GCK --------------MKIRFGVGLGAEVA---PPELPAVVDRLESTGVDSL MAV_2830|M.avium_104 --------------MKIRFGVGLGADNA---PAELGAIVDHLESTGVDSL MSMEG_3544|M.smegmatis_MC2_155 ------MPGMTSIEGKVRFGVGLGADTT---PEDLPGIVDYLESSGADSV Mb0965c|M.bovis_AF2122/97 ---MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSKYP Rv0940c|M.tuberculosis_H37Rv ---MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSKYP MMAR_5009|M.marinum_M MSPMKYTVSIAMGPIDELIGIAKTAEEVGFDSIALPDSLFYMEKAAADYP MUL_4083|M.ulcerans_Agy99 ---MKYTVSIAMGPIDELIGIAKTAEEVGFDSIALPDSLFYMEKAAADYP TH_3799|M.thermoresistible__bu ---VPISYSLELPTHRVEAPDEFVSAEAIAEIVRAAEDCGFSAVHVTDHP Mvan_5752|M.vanbaalenii_PYR-1 ---MRIGVVFPQTELGGDPGAVRAYGRR-VEELGFTHLLAYDHVVGADPA MAB_3792|M.abscessus_ATCC_1997 ---MRFSISIPQFDTGSFDGDGVRDYLARAEELGFAGGWTLEQTVG---- MLBr_00269|M.leprae_Br4923 ---------------MAELRLGYKASAEQFAPRELVELGVAAEAHGMDSA Mflv_3246|M.gilvum_PYR-GCK WLSELVY------SSAVEPFVGMAHALGRTSRLKVGTSVAVLPGRH-PVL MAV_2830|M.avium_104 WFSELVY------SPAVDPVVGMAFALARTHRLKVGTSVAVLPGRH-PVL MSMEG_3544|M.smegmatis_MC2_155 WFSELVY------SPAVDPFIGMAYTLSRTTRLKAGTSVAILPGRH-PVL Mb0965c|M.bovis_AF2122/97 YTPDGNREF-MDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIRP-PAL Rv0940c|M.tuberculosis_H37Rv YTPDGNREF-MDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIRP-PAL MMAR_5009|M.marinum_M YTPDGSRMW-NQDTPWVDPLIAAAAMGAATSKLRFYTNVLKLGSRN-PLL MUL_4083|M.ulcerans_Agy99 YTPDGSRMW-NQDTPWVDPLIAAAAMGAATSKLRFYTNVLKLGSRN-PLL TH_3799|M.thermoresistible__bu -APDARWLD-HGGHHALDPFVALSFAAAATSTIRLLTNVYIAAYRN-PFL Mvan_5752|M.vanbaalenii_PYR-1 VHTGWSGPY-DVDTTFHEPLVMFGYLAAVTTTLELVTGVIILPQRQ-TAL MAB_3792|M.abscessus_ATCC_1997 ------------SSPIIAPLELLAYAAACTTRLRLGVAVLVASQHD-PLQ MLBr_00269|M.leprae_Br4923 TVSDHFQPWRHQGGHASFSLSWMTAVGERTNRILLGTSVLTPTFRYNPAV .. * : * : . Mflv_3246|M.gilvum_PYR-GCK VAKQLASLAALAPKRVLPVFGLRSAMPAEREAFV---VPAGRRGAVFDES MAV_2830|M.avium_104 VAKQLASLAAVAPKRVLPVFGLRSAIPAEREVFV---VPDGERAAVFDES MSMEG_3544|M.smegmatis_MC2_155 VAKQVASLAALAPRRVLPAFGLHSALTAERDVFT---VPRGRRGAVFDES Mb0965c|M.bovis_AF2122/97 VAKQAGSLAALIGNRVGLGVGTS-PWPEDYELMG---VPFAKRGKRIDEC Rv0940c|M.tuberculosis_H37Rv VAKQAGSLAALIGNRVGLGVGTS-PWPEDYELMG---VPFAKRGKRIDEC MMAR_5009|M.marinum_M LARQVGSVANLTNNRFGFGVGIG-WAPEEFEWCG---VPYRRRGARVDEM MUL_4083|M.ulcerans_Agy99 LARQVGSVANLTNNRFGFGVGIG-WAPEEFEWCG---VPYRRRGARVDEM TH_3799|M.thermoresistible__bu GAKSVQSLDVLSGGRLILGTAAG-YLKPEFRALG---VDFDNRGALLDEA Mvan_5752|M.vanbaalenii_PYR-1 VAKQAAEVDLLSGGRLRFGVGVG-WNAVEYEALG---EQFTNRGTRSEEQ MAB_3792|M.abscessus_ATCC_1997 LAAAVTAVDRLSHGRLDVGVAPG-GGARNFAAFG---VDKQTFIARFTEG MLBr_00269|M.leprae_Br4923 IGQAFATMGCLYPNRVFLGVGTGEALNEVATGYQGAWPEFKERFARLRES . : : *. . * Mflv_3246|M.gilvum_PYR-GCK LRLLRAS-LEGP-TTFSGEFFSVRDVEVLPKPAS--HLDIWLGGSSRAGY MAV_2830|M.avium_104 LRLLRAALVEDS-ATFTGRYFSVTGAAVTPKPAP--PLDIWLGGSAPAAL MSMEG_3544|M.smegmatis_MC2_155 LELLNAVLRGRD-VSFDGEFFKVRSANVQPVPAK--PVDIWLGGSGPVAL Mb0965c|M.bovis_AF2122/97 IEIVRGLTTGDY-FEFHGEFYDIPKTKMTPAPTQ--PIPILVGGHADAAL Rv0940c|M.tuberculosis_H37Rv IEIVRGLTTGDY-FEFHGEFYDIPKTKMTPAPTQ--PIPILVGGHADAAL MMAR_5009|M.marinum_M IDVIKLVLGGGM-VEFHGQFYDFDRLQMSPAPSE--PVPFYVGGHTDVAL MUL_4083|M.ulcerans_Agy99 IDVIKLVLGGGM-VEFHGQFYDFDRLQMSPAPSE--PVPFYVGGHTDVAL TH_3799|M.thermoresistible__bu LDVLTQTLRGDD-VAYQGTTFSSRGVRLRPVPER--VPPIWIGGNSKPAV Mvan_5752|M.vanbaalenii_PYR-1 VELLRQLWTQRT-VTFDGRHHRVTGAGIAPLPVQR-PIPLWIGAAAPRGY MAB_3792|M.abscessus_ATCC_1997 LDLMKLAWSDEERITFRGRFRDVADLAFQPKPVQRPHPPIWFGGHAPAAL MLBr_00269|M.leprae_Br4923 VRLMRELWRGDR-VDFDGDYYQLKGASIYDVPEG--GVPIYIAAGGPEVA : :: : * . * : ... Mflv_3246|M.gilvum_PYR-GCK RRIGELGDGWLGS--FVTPDEARDAVRTIRAFAEAAGREVPEDHYGINLA MAV_2830|M.avium_104 RRIGALADGWLGS--FLTPAEARAGREAIERAAAAAGRHIEPDHFGISLA MSMEG_3544|M.smegmatis_MC2_155 ARIGRLADGWLGS--FLTPVEAGAARRTIEREAQAAGREIEPDHYGISLA Mb0965c|M.bovis_AF2122/97 RRAARA-DGWMHG--GGDPDELDRLIARVKRLREEAGKTS-PFEIHVISL Rv0940c|M.tuberculosis_H37Rv RRAARA-DGWMHG--GGDPDELDRLIARVKRLREEAGKTS-PFEIHVISL MMAR_5009|M.marinum_M RRAARIGDGWTSA--MMTGEQLAETIGKLNQLRAEYGRAEQPFEFQAVCI MUL_4083|M.ulcerans_Agy99 RRAARIGDGWTSA--MTTGEQLAETIGKLNQLRAEYGRAEQPFEFQAVCI TH_3799|M.thermoresistible__bu RRAVSRFQGWAPF--NTFGYATASRTAEISTLDELEAAISWARSYAREIG Mvan_5752|M.vanbaalenii_PYR-1 ARAGRIADGWFPL--VGPGPALDEAKGAVDAAAREAGRDPSEIGMEGRVR MAB_3792|M.abscessus_ATCC_1997 ARAVRFGDAFLGAG-SSTTAAFAEEVTTIHRELAIQGKDPARFTIGKRVY MLBr_00269|M.leprae_Br4923 KYAGRAGEGFVCTSGKGEELYTEKLIPAVLEGAAVAGRDADDIDKMIEIK :.: : . Mflv_3246|M.gilvum_PYR-GCK VGDGDLPAPVIAAIRTRRP---------------------DLDPEELVAR MAV_2830|M.avium_104 VADGELPPPAIAAVRRRRP---------------------DLDPDELIAS MSMEG_3544|M.smegmatis_MC2_155 VAAGDIPDDVYDMARRRRP---------------------EVDPAELIAA Mb0965c|M.bovis_AF2122/97 DGFT-------VDGVKRLE---------------------DKGVTDVIVG Rv0940c|M.tuberculosis_H37Rv DGFT-------VDGVKRLE---------------------DKGVTDVIVG MMAR_5009|M.marinum_M DKFG-------VQGHRELA---------------------EAGVTDNIVI MUL_4083|M.ulcerans_Agy99 DKFG-------VQGHRELA---------------------EAGVTDNIVI TH_3799|M.thermoresistible__bu RTDP--LDICFSAGNLIDD---------------------NRSLDERQAG Mvan_5752|M.vanbaalenii_PYR-1 WRHD--------LDQTAAD---------------------IGEWAEHGAS MAB_3792|M.abscessus_ATCC_1997 LMIDDDRDRAHTRVQTGLRRIYGEMKGIDAVP-------VSGPPEEVAAG MLBr_00269|M.leprae_Br4923 MSYDPDPEQALSNIRFWAPLSLAAEQKHSIDDPIEMEKVADALPIEQVAK : . Mflv_3246|M.gilvum_PYR-GCK DWAQLHRRLDRYIDA-----GLTKFVIRPAGRGSIDAFLDAFVTELLPRE MAV_2830|M.avium_104 GWDQLHRKLDAYLDA-----GLTKFVIRPAGTAPWDGFLDRFVTELVGRQ MSMEG_3544|M.smegmatis_MC2_155 DWPTLHRRIDAYVDA-----GLTKFVVRPVGSGDREAFLERFVGELLPRQ Mb0965c|M.bovis_AF2122/97 FRVPYTMGPDT--------------EPLQTKIRNLEMFAENVIAKV---- Rv0940c|M.tuberculosis_H37Rv FRVPYTMGPDT--------------EPLQTKIRNLEMFAENVIAKV---- MMAR_5009|M.marinum_M PWVFDGLGFD---------------APLGKKQDSMKRFADTYIHSGWQAA MUL_4083|M.ulcerans_Agy99 PWVFDGLGFD---------------APLGKKQDSMKRFADTYIHSGWQAA TH_3799|M.thermoresistible__bu IDRMASAGVTWLT-----------VAPGGDDRAELIERARSFAKEFIRG- Mvan_5752|M.vanbaalenii_PYR-1 HLSVDTMRAG--------------LRTVNEHLAVLEAIADRVGLR----- MAB_3792|M.abscessus_ATCC_1997 LRAVADAGAEMIL-----------LNPVGKDVAEDREQMERLAAEVIPQL MLBr_00269|M.leprae_Br4923 RWIVVSDPDEAVARVGQYVTWGLNHLVFHAPGHNQRRFLELFEKDLAPRL Mflv_3246|M.gilvum_PYR-GCK N--- MAV_2830|M.avium_104 N--- MSMEG_3544|M.smegmatis_MC2_155 N--- Mb0965c|M.bovis_AF2122/97 ---- Rv0940c|M.tuberculosis_H37Rv ---- MMAR_5009|M.marinum_M ---- MUL_4083|M.ulcerans_Agy99 ---- TH_3799|M.thermoresistible__bu ---- Mvan_5752|M.vanbaalenii_PYR-1 ---- MAB_3792|M.abscessus_ATCC_1997 A--- MLBr_00269|M.leprae_Br4923 RRLG