For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3799 | - | - | 100% (301) | putative conserved hypothetical protein |
M. thermoresistible (build 8) | TH_2146 | - | 1e-56 | 41.32% (288) | conserved hypothetical protein |
M. thermoresistible (build 8) | TH_4283 | - | 3e-51 | 38.28% (303) | PUTATIVE putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3106c | - | 2e-18 | 32.81% (192) | hypothetical protein Mb3106c |
M. gilvum PYR-GCK | Mflv_4097 | - | 7e-62 | 42.11% (304) | luciferase family protein |
M. tuberculosis H37Rv | Rv3079c | - | 2e-18 | 32.81% (192) | hypothetical protein Rv3079c |
M. leprae Br4923 | MLBr_00269 | - | 2e-10 | 24.79% (234) | putative F420-dependent glucose-6-phosphate dehydrogenase |
M. abscessus ATCC 19977 | MAB_0366 | - | 4e-24 | 35.40% (274) | hypothetical protein MAB_0366 |
M. marinum M | MMAR_0393 | - | 2e-57 | 41.22% (296) | hypothetical protein MMAR_0393 |
M. avium 104 | MAV_5129 | - | 3e-59 | 42.57% (296) | hypothetical protein MAV_5129 |
M. smegmatis MC2 155 | MSMEG_4820 | - | 7e-64 | 43.71% (302) | hypothetical protein MSMEG_4820 |
M. ulcerans Agy99 | MUL_1043 | - | 4e-57 | 42.16% (287) | hypothetical protein MUL_1043 |
M. vanbaalenii PYR-1 | Mvan_2248 | - | 2e-59 | 41.12% (304) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3106c|M.bovis_AF2122/97 -------MQFGVLTFVTDEGIGPAELGAALEHRGFESLFLAEHTHIPVNT Rv3079c|M.tuberculosis_H37Rv -------MQFGVLTFVTDEGIGPAELGAALEHRGFESLFLAEHTHIPVNT MMAR_0393|M.marinum_M -------MRF-IITHPMHSHPYHPELASGAGVAAVAAAAERAGFHGFGFT MUL_1043|M.ulcerans_Agy99 ----------------MHSHPYHPELASGAGVAAVAAAAERAGFHGFGFT MAV_5129|M.avium_104 -------MRF-TITHPMHSHPYNRELVSGDAIAKVAAATEAAGIHGFGFT MSMEG_4820|M.smegmatis_MC2_155 -------MRY-SITHPMHSHPYHPDLVSGSGVVAVAAAAEAAGFDGFGFT Mflv_4097|M.gilvum_PYR-GCK -------MQF-AITHPMHSHPYNPELVTGAGIARVAVAAEKAGFGGFGFT Mvan_2248|M.vanbaalenii_PYR-1 -------MQF-AITHPMHSHPYNPELVTGTGIAQVAQAAEKAGFGGFGFT TH_3799|M.thermoresistible__bu -----VPISY-SLELPTHRVEAPDEFVSAEAIAEIVRAAEDCGFSAVHVT MAB_0366|M.abscessus_ATCC_1997 MKIGVVAPVELGVTAEPDKILEFARAAERLGFSEISVVEHAVVIGDTQST MLBr_00269|M.leprae_Br4923 ------------MAELRLGYKASAEQFAPRELVELGVAAEAHGMDSATVS . : Mb3106c|M.bovis_AF2122/97 QSPYPGGGPIPEKYYRTLDPFVALAAAAATTQSLVLGTGIALIPER-DPI Rv3079c|M.tuberculosis_H37Rv QSPYPGGGPIPEKYYRTLDPFVALAAAAATTQSLVLGTGIALIPER-DPI MMAR_0393|M.marinum_M DHPAPSQRWLEAGGHDSLDPFVALGFAAAQTTSLRLIPNIVVLPYR-NPF MUL_1043|M.ulcerans_Agy99 DHPAPSQRWLEAGGHDSLDPFVALGFAAAQTTSLRLIPNIVVLPYR-NPF MAV_5129|M.avium_104 DHPAPSQRWLEAGGHDALDPFVALGFAAATTSTLRLIPNIVVLPYR-NPF MSMEG_4820|M.smegmatis_MC2_155 DHPAPSQRWLDAGGHDAVDPFVAMAYAAAQTTTLRLVPNIVVLPYR-NPF Mflv_4097|M.gilvum_PYR-GCK DHPAPTQRWLEAGGHDALDPFVAMGFAAAHTTTLRLIPNIVVLPYR-NPF Mvan_2248|M.vanbaalenii_PYR-1 DHPAPTQRWLEAGGHDALDPFVAMGFAAAHTSTLRLIPNIVVLPYR-NPF TH_3799|M.thermoresistible__bu DHPAPDARWLDHGGHHALDPFVALSFAAAATSTIRLLTNVYIAAYR-NPF MAB_0366|M.abscessus_ATCC_1997 YPYSPTGQSHLPDDIDIPDPLELLSFVAAATTTLGLSTGVLVLPDH-HPV MLBr_00269|M.leprae_Br4923 DHFQP---WRHQGGHASFS-LSWMTAVGERTNRILLGTSVLTPTFRYNPA * . : : .. * : * ..: . : .* Mb3106c|M.bovis_AF2122/97 VTAKEVASLDLVSQGRFRFGVGVGWLREEVAN----HGVDPAVRGRVIDE Rv3079c|M.tuberculosis_H37Rv VTAKEVASLDLVSQGRFRFGVGVGWLREEVAN----HGVDPAVRGRVIDE MMAR_0393|M.marinum_M VVAKSAATLDLLSGGRFILAVGVGYLKREFAA----LGVDHAERAELFEE MUL_1043|M.ulcerans_Agy99 VVAKSAATLDLLSGGRFILAVGVGYLKREFAA----LGVDHAERAELFDE MAV_5129|M.avium_104 VVAKSGATLDLLSGGRFTLAVGVGYLKREFAA----LGVSYDERAELFEE MSMEG_4820|M.smegmatis_MC2_155 VVAKSGATLDLLSGGRFTLAVGVGYLKREFAA----LGVAFDERTELFDE Mflv_4097|M.gilvum_PYR-GCK VVAKAGATLDLISDGRFTLAVGVGYLKREFAA----LGVEFDERAAVFEE Mvan_2248|M.vanbaalenii_PYR-1 VVAKAGATLDLISEGRFTLAVGVGYLKREFTA----LGVDFDERAELFEE TH_3799|M.thermoresistible__bu LGAKSVQSLDVLSGGRLILGTAAGYLKPEFRA----LGVDFDNRGALLDE MAB_0366|M.abscessus_ATCC_1997 VLAKRLATLDRLSRGRLRICAGVGWMREEIEA----CGGDFDRRGRAADE MLBr_00269|M.leprae_Br4923 VIGQAFATMGCLYPNRVFLGVGTGEALNEVATGYQGAWPEFKERFARLRE : .: ::. : .*. : ...* *. * * Mb3106c|M.bovis_AF2122/97 RLRAIIEIWTQE-QAEFHGTYVDFDPIYCWPKPVTKPYPPLYVGGGP-AN Rv3079c|M.tuberculosis_H37Rv RLRAIIEIWTQE-QAEFHGTYVDFDPIYCWPKPVTKPYPPLYVGGGP-AN MMAR_0393|M.marinum_M ALQVIRAVWTSD-DISFEGRHFSARGITAHPRPASNPYPPIWVGGNTAAA MUL_1043|M.ulcerans_Agy99 ALQVIRAVWTSD-DISFEGRHFSARGITAHPRPASNPYPPIWVGGNTAAA MAV_5129|M.avium_104 ALQVIRAVWTGD-DISFEGRHFSARGITAHPRPVSSPHPPIWIGGNTAAA MSMEG_4820|M.smegmatis_MC2_155 SLEVIRGIWTTD-DFTYEGMHFSARGITAHPRPVNP--PPIWIGGNTAAA Mflv_4097|M.gilvum_PYR-GCK ALDVITQIWTTD-DLSYDGRNFSAKGITAHPKPLTTPHPPIWVGGNTSAA Mvan_2248|M.vanbaalenii_PYR-1 SLQVIRDAWTTD-DITFEGKHFSAKGITAHPRPVSTPHPPIWVGGNTSAA TH_3799|M.thermoresistible__bu ALDVLTQTLRGD-DVAYQGTTFSSRGVR--LRPVPERVPPIWIGGNSKPA MAB_0366|M.abscessus_ATCC_1997 AIAVMRALWSTDGPTSHDGEFYSFRNAYSYPKPVRPQGVPLYIGGHSKAA MLBr_00269|M.leprae_Br4923 SVRLMRELWRGD-RVDFDGDYYQLKGASIYDVPEGG--VPIYIAAGGPEV : : : ..* . * *:::.. Mb3106c|M.bovis_AF2122/97 FPRIARLNAGWIAISP--------------SPQRLSGP------------ Rv3079c|M.tuberculosis_H37Rv FPRIARLNAGWIAISP--------------SPQRLSGP------------ MMAR_0393|M.marinum_M RRRVAAHGDGWCPFPAPAPLAQTAGTAAIDSADRLAAG------------ MUL_1043|M.ulcerans_Agy99 RRRVAVHGDGWCPFPAPAPLAQTAGTAAIDSADRLAAG------------ MAV_5129|M.avium_104 RQRVADYGDGWCPFPAPPQLARTAGTAVIDSVAKLADG------------ MSMEG_4820|M.smegmatis_MC2_155 RARVARHGDGWCPFAAPPGLAQTAGTAAIDSIERLAAG------------ Mflv_4097|M.gilvum_PYR-GCK RARVAKYAQGWCPFRAPAMLAQTARTAALETTEHLAKG------------ Mvan_2248|M.vanbaalenii_PYR-1 RARVARYAQGWCPFRAPAVLAQTARTAALETVEHLKAG------------ TH_3799|M.thermoresistible__bu VRRAVSRFQGWAPFNT-FGYATASRTAEISTLDELEAA------------ MAB_0366|M.abscessus_ATCC_1997 ARRAGRLGSGFQPLGLVG--------------DDLTAA------------ MLBr_00269|M.leprae_Br4923 AKYAGRAGEGFVCTSGKGEELYTEKLIPAVLEGAAVAGRDADDIDKMIEI *: Mb3106c|M.bovis_AF2122/97 ----------------------LQRLRAMAG-----------------GD Rv3079c|M.tuberculosis_H37Rv ----------------------LQRLRAMAG-----------------GD MMAR_0393|M.marinum_M ----------------------IDDLRRKCDAAGRDFSAIDVTFTNFDGG MUL_1043|M.ulcerans_Agy99 ----------------------IDDLRRKCDAAGRDFSAIDVTFTNFDGG MAV_5129|M.avium_104 ----------------------IADLRRRCDAAQRDWSTIDITFTNFEGG MSMEG_4820|M.smegmatis_MC2_155 ----------------------IADLRAKLDAAQRDPSTVDIVFTNFDGG Mflv_4097|M.gilvum_PYR-GCK ----------------------IDDLRRRLEDAGRDPADVDITFTNDAGG Mvan_2248|M.vanbaalenii_PYR-1 ----------------------IDDLRRRLEGTGRDPFDIDITFTNDAGG TH_3799|M.thermoresistible__bu ----------------------ISWARSYAREIGR-TDPLDICFS---AG MAB_0366|M.abscessus_ATCC_1997 ----------------------VGVMRAAAVDAGRDPRGLDLVLG----- MLBr_00269|M.leprae_Br4923 KMSYDPDPEQALSNIRFWAPLSLAAEQKHSIDDPIEMEKVADALPIEQVA : : Mb3106c|M.bovis_AF2122/97 VPVTVCQWGEAAAKDLEGYRHLGVERVLLELPTEPRDPTLRYLDKLQAEL Rv3079c|M.tuberculosis_H37Rv VPVTVCQWGEAAAKDLEGYRHLGVERVLLELPTEPRDPTLRYLDKLQAEL MMAR_0393|M.marinum_M GPASADFNADAYLGGLEKLATLGVTWVHVGLPGDGLAHALECIDRFRVQV MUL_1043|M.ulcerans_Agy99 GPASADFNADAYLGGLEKLAMLGVTWVHVGLPGDGLAHALECIDRFRVQV MAV_5129|M.avium_104 SPADDEFNADAYLDGLDKLAKLGVTWVSVHLPGDSMAHALETLDRFRTLV MSMEG_4820|M.smegmatis_MC2_155 NPGDDDFDADAYLAGVDQLAALGVTWLHVTIPGDSLAHALETIEGFGKSV Mflv_4097|M.gilvum_PYR-GCK APGTDDFNADEFLAGAEELERAGVTWLQVNVPGDSLAHAVEAIEGFGETV Mvan_2248|M.vanbaalenii_PYR-1 SPGAADFNADEFLSGAAELERAGVTWIQVTVPGDSLAHTLEAIEEFGGSV TH_3799|M.thermoresistible__bu NLIDDNRSLDERQAGIDRMASAGVTWLTVAPGGDDRAELIERARSFAKEF MAB_0366|M.abscessus_ATCC_1997 ---HGLHRVDQAALDQAAHAGAGRMLLSASRRATTLEAVLEEMAGCATRL MLBr_00269|M.leprae_Br4923 KRWIVVSDPDEAVARVGQYVTWGLNHLVFHAPGHNQRRFLELFEKDLAPR : * : :. Mb3106c|M.bovis_AF2122/97 ARLA-- Rv3079c|M.tuberculosis_H37Rv ARLA-- MMAR_0393|M.marinum_M IEAA-- MUL_1043|M.ulcerans_Agy99 IEAA-- MAV_5129|M.avium_104 VDAA-- MSMEG_4820|M.smegmatis_MC2_155 IAR--- Mflv_4097|M.gilvum_PYR-GCK IAQR-- Mvan_2248|M.vanbaalenii_PYR-1 IGRP-- TH_3799|M.thermoresistible__bu IRG--- MAB_0366|M.abscessus_ATCC_1997 ELGGPR MLBr_00269|M.leprae_Br4923 LRRLG-