For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KTFFITGVSSGLGQAFANGALAAGHRVVGTVRKDSDAAAFESTAPDRAHARQLDVTDDAAVTAVVAEVEK NIGPIDVVIANAGYGVEGIFEETPIAEMRAQFATNVFGVAATLQAALPYLRERRKGHLMAVTSMGGLMAV PGMSAYCASKFAVEGMLESIRKEISGFGIHVTAIEPGSFRTDWAGRSMTRADRSIADYDELFEPIRAARL KASGNQLGNPVKAAEAVLAILDEPEPPAHLVLGSDALRLVGAARAAVDEDIRRWEELSRSTDFADGAQLA ST*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3426 | - | - | 100% (283) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2026 | - | 2e-59 | 43.07% (274) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_1114 | - | 2e-52 | 43.61% (266) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1914c | - | 8e-21 | 32.35% (238) | short chain dehydrogenase |
M. gilvum PYR-GCK | Mflv_0295 | - | 2e-49 | 40.94% (276) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1882c | - | 8e-21 | 32.35% (238) | short chain dehydrogenase |
M. leprae Br4923 | MLBr_00862 | ephD | 4e-21 | 32.22% (239) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_1305 | - | 8e-27 | 32.69% (260) | short-chain dehydrogenase/reductase |
M. marinum M | MMAR_1614 | - | 3e-51 | 38.83% (273) | short chain dehydrogenase |
M. avium 104 | MAV_1976 | - | 1e-112 | 69.86% (282) | short chain dehydrogenase |
M. thermoresistible (build 8) | TH_3670 | - | 2e-46 | 39.07% (279) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_3423 | - | 3e-51 | 38.46% (273) | short chain dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0982 | - | 3e-49 | 41.73% (266) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 MPATQSIHKVPHQFVESPDGVRLAIYQSGQPEGPAIVLVHGFPDSHVLWD MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 GVVPLLAKRFRIVRYDNRGVGQSSVPKPVSAYTMTRFADDFAAVIDELSP MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 DRPVHVLAHDWGSVGVWEYLSRSGASDRVASFTSVSGPSQDQLVDYILSG MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 LRRPWRPRTFARAVSQLFRLTYMVLFSIPVLVPMVLWIALSSATIRRTMV MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 DNISTDQIHHSATLARDAAHSVKTYPANYFRAFSGRRRGKGVPVVNVPVQ MSMEG_3426|M.smegmatis_MC2_155 -------------------------------------------------- MAV_1976|M.avium_104 -------------------------------------------------- MMAR_1614|M.marinum_M -------------------------------------------------- MUL_3423|M.ulcerans_Agy99 -------------------------------------------------- TH_3670|M.thermoresistible__bu -------------------------------------------------- Mvan_0982|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_0295|M.gilvum_PYR-GCK -------------------------------------------------- Mb1914c|M.bovis_AF2122/97 -------------------------------------------------- Rv1882c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_1305|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 LIVNTMDRYVRPYGYDATARWVPRLWRRDIKAGHFSPMSHPQVMAAAVHD MSMEG_3426|M.smegmatis_MC2_155 ---------------------------MKTFFITGVSSGLGQAFANGALA MAV_1976|M.avium_104 --------------------------MPKTFFITGVSSGLGRALAHGALE MMAR_1614|M.marinum_M ---------------------------MSTWLITGCSTGLGRALAEAVID MUL_3423|M.ulcerans_Agy99 ---------------------------MSTWLITGCSTGLGRALAEAVID TH_3670|M.thermoresistible__bu --------------MGSNVWG------SKVWFITGASRGFGREWAIAALD Mvan_0982|M.vanbaalenii_PYR-1 --------------MPGHPTGIDPGMTEKVWFITGASRGFGREWAIAALD Mflv_0295|M.gilvum_PYR-GCK --------------------------MSKVLLISGASRGLGRAITESALA Mb1914c|M.bovis_AF2122/97 ---------------------------MKAIFITGAGSGMGREGATLFHA Rv1882c|M.tuberculosis_H37Rv ---------------------------MKAIFITGAGSGMGREGATLFHA MAB_1305|M.abscessus_ATCC_1997 ------------------------MSEHWTVLVTGASSGIGASAARIFAE MLBr_00862|M.leprae_Br4923 LADLVDGKQPSRALLRAQVGRSRDTFGDTLVSVTGAGSGIGRETALALAR ::* . *:* : MSMEG_3426|M.smegmatis_MC2_155 AGHRVVGTVRKDSDAAAF---ESTAPDRAHARQLDVTDDAAVTAVVAEVE MAV_1976|M.avium_104 AGHTVIGTVRKTADLAPF---EALD-AKAHGRILDVTDHAAVIDTVAEAE MMAR_1614|M.marinum_M AGHHTVATARSVGGVADL---VQRSPERVLPLALDITEPDQITAAVQAAQ MUL_3423|M.ulcerans_Agy99 AGHHTVATARSVGGVADL---AQRSPERVLPLALDITEPDQITAAMQAAQ TH_3670|M.thermoresistible__bu RGDRVAATARDVSTLDDL---RDRFGDAVLAMTLDVTDRAADFAAVQRAH Mvan_0982|M.vanbaalenii_PYR-1 RGDKVAATARDLSTLDDL---TAKYGDALLPLTLDVTDRDADFAAVTQAH Mflv_0295|M.gilvum_PYR-GCK AGHLVVAGVRATSSLSDL---ATREPDRLAVVELDVTDDRHARAAVATAV Mb1914c|M.bovis_AF2122/97 NGWRVGAIDRNEDGLAALR--VQLGAERLWARAVDVTDKAALEGALADFC Rv1882c|M.tuberculosis_H37Rv NGWRVGAIDRNEDGLAALR--VQLGAERLWARAVDVTDKAALEGALADFC MAB_1305|M.abscessus_ATCC_1997 RGHRVFGTSRNPDTITDR-------VPGVQYLRLDQTDKASIAECVAQAG MLBr_00862|M.leprae_Br4923 RGAEVVVSDIDEAAAKNTAAQIVASGGVAYAYALDVSDAAAVEAFAEQVS * . :* :: MSMEG_3426|M.smegmatis_MC2_155 KN--IGPIDVVIANAGYGVEGIFEETPIAEMRAQFATNVFGVAATLQAAL MAV_1976|M.avium_104 AS--IGPIDVLIANAGYGLEGVFEETPLSEVRAQFETNFFGAAATVQSVL MMAR_1614|M.marinum_M QR--FGGIDVLVNNAGYGYRAAVEEGDDAEVRDLFETHFFGTVALIKAVL MUL_3423|M.ulcerans_Agy99 QR--FGGIDVLVNNAGYGYRAAVEEGDDAEVRDLFETHFFGTVALIKAVL TH_3670|M.thermoresistible__bu DH--FGRLDIVVNNAGYGHFGFVEELTETEVRDQMETNFFGALWVTQAAL Mvan_0982|M.vanbaalenii_PYR-1 DH--FGRLDIVVNNAGYGQFGFVEELSEQEARAQIDTNVFGALWITQAAL Mflv_0295|M.gilvum_PYR-GCK ER--FGRLDVLVNNAGYANMSAIEDVDVDDFRAQIETNFFGVVNLTRAAL Mb1914c|M.bovis_AF2122/97 AGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAAL Rv1882c|M.tuberculosis_H37Rv AGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAAL MAB_1305|M.abscessus_ATCC_1997 EV------DILVNNAGESQIGALEDVSMDDFEKLYMTNVFGPVALTKAVL MLBr_00862|M.leprae_Br4923 AK--HGVPDIVVNNAGIGQAGRFLDTPPEEFDRVLAVNLGGVVNCCRAFG *:: *** . . . : .:. . : MSMEG_3426|M.smegmatis_MC2_155 PYLRER-RKGHLMAVTSMGGLMAVPGMSAYCASKFAVEGMLESIRKEISG MAV_1976|M.avium_104 PYMRKR-RGGHIMAVTSMGGLMTVPGLSVYCASKYALEGLLESIGKEVAG MMAR_1614|M.marinum_M PDMRAR-RSGAIVNISSIAVALTPVGSGYYAAAKAAMEGMSGALHGELAP MUL_3423|M.ulcerans_Agy99 PDMRAR-RSGAIVNISSIAVALTPVGSGYYAAAKAAMEGMSGALHGELAP TH_3670|M.thermoresistible__bu PYLRRQ-RSGHIIQVSSIGGVSAFADLGAYHASKWALEGLSQSLSLEVAP Mvan_0982|M.vanbaalenii_PYR-1 PYLRAQ-RSGHLIQVSSIGGIVAFPNLGIYHASKWALEGFSQALAQEVAE Mflv_0295|M.gilvum_PYR-GCK PAMRRQ-RDGHIVQISSVGGRLVRPGLAAYQSAKWAVTGFSGVLAVEVAP Mb1914c|M.bovis_AF2122/97 PYLKKA-PGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQR Rv1882c|M.tuberculosis_H37Rv PYLKKA-PGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQR MAB_1305|M.abscessus_ATCC_1997 PGMRER-RRGAVVMVGSMAGTLHVPFRSTYSSAKSALHTVADCLRYEVAP MLBr_00862|M.leprae_Br4923 QRLVERGTGGHIVNVSSMAAYAPLQSLSAYCTSKAATYMFSDCLRAELDA : . :. * . . * ::* * . : * MSMEG_3426|M.smegmatis_MC2_155 FGIHVTAIEPGSFRTDWAGRSMTRADRSIADYDELFEPIRAARLKASGNQ MAV_1976|M.avium_104 FGIHVTAIEPGSFRTDWAGRSMVRAERAIDDYDAVFEPIRSARLRANGNQ MMAR_1614|M.marinum_M LGISVTVVEPGAFRTDFAGRSLVQSTRMINDYAATAGQRRKENDTMHGNQ MUL_3423|M.ulcerans_Agy99 LGISVTVVEPGAFRTDFAGRSLVQSTRMINDYAATAGQRRKENDTMHGNQ TH_3670|M.thermoresistible__bu FGIHVTLIEPGGYATDWGGSSARRSA-TMPEYAESRAEADRVR-SQRVAR Mvan_0982|M.vanbaalenii_PYR-1 FGIHVTLIEPGGYSTDWAGASAKRAT-ALPAYAEAHAATERTR-QARTAR Mflv_0295|M.gilvum_PYR-GCK LGIKVTVLEPGGMRTDWAGSSMRIAP-VREEYAATVGAAASLS-DPNVLG Mb1914c|M.bovis_AF2122/97 HGVRVADVLPGLIDTAILTSTRQHSD--EGPYTISAEQIRAAAPKKGMFR Rv1882c|M.tuberculosis_H37Rv HGVRVADVLPGLIDTAILTSTRQHSD--EGPYTISAEQIRAAAPKKGMFR MAB_1305|M.abscessus_ATCC_1997 FGITVSTVEPGVIATGIETRRNRIVP-DGSPYRDAFRTVDAAMAAREEHG MLBr_00862|M.leprae_Br4923 VGVGLTTICPGVIDTNIIQSTRIDTP---TAKQERVRDRRGQLDMMFRLR *: :: : ** * MSMEG_3426|M.smegmatis_MC2_155 LGNPVKAAEAVLAILDEPEPPAHLVLGSDALRLVGAARAAVDEDIRRWEE MAV_1976|M.avium_104 LGDPAKAATAILTAVEAAQPPRHLLLGSDALRLIRAGRDAVDADIAAWES MMAR_1614|M.marinum_M PGDPAKAAAAIITAVESPAPPAFLLLGPDALMAYRHIAQRRDVEITDWEQ MUL_3423|M.ulcerans_Agy99 PGDPAKAAAAIITAVESPAPPAFLLLGPDALMAYRHIAQRRDVEITDWEQ TH_3670|M.thermoresistible__bu PGDPKASAAALLKVVDAEKPPLRVFFGELPLQIVNADYQSRLQTWEEWQP Mvan_0982|M.vanbaalenii_PYR-1 PGDPQASARALLTVVDAPEPPLRVFFGELPLELARADYESRLANWEKWQP Mflv_0295|M.gilvum_PYR-GCK ASDPAKVAGLLLDVIGMPDPPRRLLVGPDAYRYATAAGRDLLAVDERWRT Mb1914c|M.bovis_AF2122/97 LMPSSSVAEAAWRAYQHP--TRLHWYVPRSIRWIDRLKGVSPEFVRRHIA Rv1882c|M.tuberculosis_H37Rv LMPSSSVAEAAWRAYQHP--TRLHWYVPRSIRWIDRLKGVSPEFVRRHIA MAB_1305|M.abscessus_ATCC_1997 -TATDELGRLVVDVALSPSPKPLYAKGSNAPIIMTAQRLLPARLFLKFLA MLBr_00862|M.leprae_Br4923 RYGPDKVADTILSAIKKNKPIRPVAPEAYALYGISRVLPQVLRSTARIRV . . . MSMEG_3426|M.smegmatis_MC2_155 LSRSTDFADGAQLAST------- MAV_1976|M.avium_104 LSRSTDFPDGHQIAAS------- MMAR_1614|M.marinum_M LTAGTNLTP-------------- MUL_3423|M.ulcerans_Agy99 LTAGTNLTP-------------- TH_3670|M.thermoresistible__bu IAVLAQG---------------- Mvan_0982|M.vanbaalenii_PYR-1 VAIEAQG---------------- Mflv_0295|M.gilvum_PYR-GCK LSMSTAADDVSPEQLDPLGSASR Mb1914c|M.bovis_AF2122/97 KSLATLEPKRK------------ Rv1882c|M.tuberculosis_H37Rv KSLATLEPKRK------------ MAB_1305|M.abscessus_ATCC_1997 RMHGLKVR--------------- MLBr_00862|M.leprae_Br4923 I----------------------