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M. smegmatis MC2 155 MSMEG_3426 (-)

annotation: short chain dehydrogenase
coordinates: 3497064 - 3497915
length: 283

KTFFITGVSSGLGQAFANGALAAGHRVVGTVRKDSDAAAFESTAPDRAHARQLDVTDDAAVTAVVAEVEK
NIGPIDVVIANAGYGVEGIFEETPIAEMRAQFATNVFGVAATLQAALPYLRERRKGHLMAVTSMGGLMAV
PGMSAYCASKFAVEGMLESIRKEISGFGIHVTAIEPGSFRTDWAGRSMTRADRSIADYDELFEPIRAARL
KASGNQLGNPVKAAEAVLAILDEPEPPAHLVLGSDALRLVGAARAAVDEDIRRWEELSRSTDFADGAQLA
ST*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3426--100% (283)short chain dehydrogenase
M. smegmatis MC2 155MSMEG_2026-2e-5943.07% (274) short chain dehydrogenase
M. smegmatis MC2 155MSMEG_1114-2e-5243.61% (266) short chain dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1914c-8e-2132.35% (238) short chain dehydrogenase
M. gilvum PYR-GCKMflv_0295-2e-4940.94% (276) short-chain dehydrogenase/reductase SDR
M. tuberculosis H37RvRv1882c-8e-2132.35% (238) short chain dehydrogenase
M. leprae Br4923MLBr_00862ephD4e-2132.22% (239) short chain dehydrogenase
M. abscessus ATCC 19977MAB_1305-8e-2732.69% (260) short-chain dehydrogenase/reductase
M. marinum MMMAR_1614-3e-5138.83% (273) short chain dehydrogenase
M. avium 104MAV_1976-1e-11269.86% (282) short chain dehydrogenase
M. thermoresistible (build 8)TH_3670-2e-4639.07% (279) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_3423-3e-5138.46% (273) short chain dehydrogenase
M. vanbaalenii PYR-1Mvan_0982-3e-4941.73% (266) short chain dehydrogenase

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          MPATQSIHKVPHQFVESPDGVRLAIYQSGQPEGPAIVLVHGFPDSHVLWD
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          GVVPLLAKRFRIVRYDNRGVGQSSVPKPVSAYTMTRFADDFAAVIDELSP
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          DRPVHVLAHDWGSVGVWEYLSRSGASDRVASFTSVSGPSQDQLVDYILSG
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          LRRPWRPRTFARAVSQLFRLTYMVLFSIPVLVPMVLWIALSSATIRRTMV
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          DNISTDQIHHSATLARDAAHSVKTYPANYFRAFSGRRRGKGVPVVNVPVQ
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      --------------------------------------------------
MAV_1976|M.avium_104                --------------------------------------------------
MMAR_1614|M.marinum_M               --------------------------------------------------
MUL_3423|M.ulcerans_Agy99           --------------------------------------------------
TH_3670|M.thermoresistible__bu      --------------------------------------------------
Mvan_0982|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_0295|M.gilvum_PYR-GCK          --------------------------------------------------
Mb1914c|M.bovis_AF2122/97           --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv        --------------------------------------------------
MAB_1305|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_00862|M.leprae_Br4923          LIVNTMDRYVRPYGYDATARWVPRLWRRDIKAGHFSPMSHPQVMAAAVHD
                                                                                      

MSMEG_3426|M.smegmatis_MC2_155      ---------------------------MKTFFITGVSSGLGQAFANGALA
MAV_1976|M.avium_104                --------------------------MPKTFFITGVSSGLGRALAHGALE
MMAR_1614|M.marinum_M               ---------------------------MSTWLITGCSTGLGRALAEAVID
MUL_3423|M.ulcerans_Agy99           ---------------------------MSTWLITGCSTGLGRALAEAVID
TH_3670|M.thermoresistible__bu      --------------MGSNVWG------SKVWFITGASRGFGREWAIAALD
Mvan_0982|M.vanbaalenii_PYR-1       --------------MPGHPTGIDPGMTEKVWFITGASRGFGREWAIAALD
Mflv_0295|M.gilvum_PYR-GCK          --------------------------MSKVLLISGASRGLGRAITESALA
Mb1914c|M.bovis_AF2122/97           ---------------------------MKAIFITGAGSGMGREGATLFHA
Rv1882c|M.tuberculosis_H37Rv        ---------------------------MKAIFITGAGSGMGREGATLFHA
MAB_1305|M.abscessus_ATCC_1997      ------------------------MSEHWTVLVTGASSGIGASAARIFAE
MLBr_00862|M.leprae_Br4923          LADLVDGKQPSRALLRAQVGRSRDTFGDTLVSVTGAGSGIGRETALALAR
                                                                    ::* . *:*   :     

MSMEG_3426|M.smegmatis_MC2_155      AGHRVVGTVRKDSDAAAF---ESTAPDRAHARQLDVTDDAAVTAVVAEVE
MAV_1976|M.avium_104                AGHTVIGTVRKTADLAPF---EALD-AKAHGRILDVTDHAAVIDTVAEAE
MMAR_1614|M.marinum_M               AGHHTVATARSVGGVADL---VQRSPERVLPLALDITEPDQITAAVQAAQ
MUL_3423|M.ulcerans_Agy99           AGHHTVATARSVGGVADL---AQRSPERVLPLALDITEPDQITAAMQAAQ
TH_3670|M.thermoresistible__bu      RGDRVAATARDVSTLDDL---RDRFGDAVLAMTLDVTDRAADFAAVQRAH
Mvan_0982|M.vanbaalenii_PYR-1       RGDKVAATARDLSTLDDL---TAKYGDALLPLTLDVTDRDADFAAVTQAH
Mflv_0295|M.gilvum_PYR-GCK          AGHLVVAGVRATSSLSDL---ATREPDRLAVVELDVTDDRHARAAVATAV
Mb1914c|M.bovis_AF2122/97           NGWRVGAIDRNEDGLAALR--VQLGAERLWARAVDVTDKAALEGALADFC
Rv1882c|M.tuberculosis_H37Rv        NGWRVGAIDRNEDGLAALR--VQLGAERLWARAVDVTDKAALEGALADFC
MAB_1305|M.abscessus_ATCC_1997      RGHRVFGTSRNPDTITDR-------VPGVQYLRLDQTDKASIAECVAQAG
MLBr_00862|M.leprae_Br4923          RGAEVVVSDIDEAAAKNTAAQIVASGGVAYAYALDVSDAAAVEAFAEQVS
                                     *  .                            :* ::            

MSMEG_3426|M.smegmatis_MC2_155      KN--IGPIDVVIANAGYGVEGIFEETPIAEMRAQFATNVFGVAATLQAAL
MAV_1976|M.avium_104                AS--IGPIDVLIANAGYGLEGVFEETPLSEVRAQFETNFFGAAATVQSVL
MMAR_1614|M.marinum_M               QR--FGGIDVLVNNAGYGYRAAVEEGDDAEVRDLFETHFFGTVALIKAVL
MUL_3423|M.ulcerans_Agy99           QR--FGGIDVLVNNAGYGYRAAVEEGDDAEVRDLFETHFFGTVALIKAVL
TH_3670|M.thermoresistible__bu      DH--FGRLDIVVNNAGYGHFGFVEELTETEVRDQMETNFFGALWVTQAAL
Mvan_0982|M.vanbaalenii_PYR-1       DH--FGRLDIVVNNAGYGQFGFVEELSEQEARAQIDTNVFGALWITQAAL
Mflv_0295|M.gilvum_PYR-GCK          ER--FGRLDVLVNNAGYANMSAIEDVDVDDFRAQIETNFFGVVNLTRAAL
Mb1914c|M.bovis_AF2122/97           AGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAAL
Rv1882c|M.tuberculosis_H37Rv        AGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAAL
MAB_1305|M.abscessus_ATCC_1997      EV------DILVNNAGESQIGALEDVSMDDFEKLYMTNVFGPVALTKAVL
MLBr_00862|M.leprae_Br4923          AK--HGVPDIVVNNAGIGQAGRFLDTPPEEFDRVLAVNLGGVVNCCRAFG
                                            *::  *** .  . . :           .:. .      :  

MSMEG_3426|M.smegmatis_MC2_155      PYLRER-RKGHLMAVTSMGGLMAVPGMSAYCASKFAVEGMLESIRKEISG
MAV_1976|M.avium_104                PYMRKR-RGGHIMAVTSMGGLMTVPGLSVYCASKYALEGLLESIGKEVAG
MMAR_1614|M.marinum_M               PDMRAR-RSGAIVNISSIAVALTPVGSGYYAAAKAAMEGMSGALHGELAP
MUL_3423|M.ulcerans_Agy99           PDMRAR-RSGAIVNISSIAVALTPVGSGYYAAAKAAMEGMSGALHGELAP
TH_3670|M.thermoresistible__bu      PYLRRQ-RSGHIIQVSSIGGVSAFADLGAYHASKWALEGLSQSLSLEVAP
Mvan_0982|M.vanbaalenii_PYR-1       PYLRAQ-RSGHLIQVSSIGGIVAFPNLGIYHASKWALEGFSQALAQEVAE
Mflv_0295|M.gilvum_PYR-GCK          PAMRRQ-RDGHIVQISSVGGRLVRPGLAAYQSAKWAVTGFSGVLAVEVAP
Mb1914c|M.bovis_AF2122/97           PYLKKA-PGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQR
Rv1882c|M.tuberculosis_H37Rv        PYLKKA-PGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQR
MAB_1305|M.abscessus_ATCC_1997      PGMRER-RRGAVVMVGSMAGTLHVPFRSTYSSAKSALHTVADCLRYEVAP
MLBr_00862|M.leprae_Br4923          QRLVERGTGGHIVNVSSMAAYAPLQSLSAYCTSKAATYMFSDCLRAELDA
                                      :      . :.   * .        . * ::* *   .   :  *   

MSMEG_3426|M.smegmatis_MC2_155      FGIHVTAIEPGSFRTDWAGRSMTRADRSIADYDELFEPIRAARLKASGNQ
MAV_1976|M.avium_104                FGIHVTAIEPGSFRTDWAGRSMVRAERAIDDYDAVFEPIRSARLRANGNQ
MMAR_1614|M.marinum_M               LGISVTVVEPGAFRTDFAGRSLVQSTRMINDYAATAGQRRKENDTMHGNQ
MUL_3423|M.ulcerans_Agy99           LGISVTVVEPGAFRTDFAGRSLVQSTRMINDYAATAGQRRKENDTMHGNQ
TH_3670|M.thermoresistible__bu      FGIHVTLIEPGGYATDWGGSSARRSA-TMPEYAESRAEADRVR-SQRVAR
Mvan_0982|M.vanbaalenii_PYR-1       FGIHVTLIEPGGYSTDWAGASAKRAT-ALPAYAEAHAATERTR-QARTAR
Mflv_0295|M.gilvum_PYR-GCK          LGIKVTVLEPGGMRTDWAGSSMRIAP-VREEYAATVGAAASLS-DPNVLG
Mb1914c|M.bovis_AF2122/97           HGVRVADVLPGLIDTAILTSTRQHSD--EGPYTISAEQIRAAAPKKGMFR
Rv1882c|M.tuberculosis_H37Rv        HGVRVADVLPGLIDTAILTSTRQHSD--EGPYTISAEQIRAAAPKKGMFR
MAB_1305|M.abscessus_ATCC_1997      FGITVSTVEPGVIATGIETRRNRIVP-DGSPYRDAFRTVDAAMAAREEHG
MLBr_00862|M.leprae_Br4923          VGVGLTTICPGVIDTNIIQSTRIDTP---TAKQERVRDRRGQLDMMFRLR
                                     *: :: : **   *                                   

MSMEG_3426|M.smegmatis_MC2_155      LGNPVKAAEAVLAILDEPEPPAHLVLGSDALRLVGAARAAVDEDIRRWEE
MAV_1976|M.avium_104                LGDPAKAATAILTAVEAAQPPRHLLLGSDALRLIRAGRDAVDADIAAWES
MMAR_1614|M.marinum_M               PGDPAKAAAAIITAVESPAPPAFLLLGPDALMAYRHIAQRRDVEITDWEQ
MUL_3423|M.ulcerans_Agy99           PGDPAKAAAAIITAVESPAPPAFLLLGPDALMAYRHIAQRRDVEITDWEQ
TH_3670|M.thermoresistible__bu      PGDPKASAAALLKVVDAEKPPLRVFFGELPLQIVNADYQSRLQTWEEWQP
Mvan_0982|M.vanbaalenii_PYR-1       PGDPQASARALLTVVDAPEPPLRVFFGELPLELARADYESRLANWEKWQP
Mflv_0295|M.gilvum_PYR-GCK          ASDPAKVAGLLLDVIGMPDPPRRLLVGPDAYRYATAAGRDLLAVDERWRT
Mb1914c|M.bovis_AF2122/97           LMPSSSVAEAAWRAYQHP--TRLHWYVPRSIRWIDRLKGVSPEFVRRHIA
Rv1882c|M.tuberculosis_H37Rv        LMPSSSVAEAAWRAYQHP--TRLHWYVPRSIRWIDRLKGVSPEFVRRHIA
MAB_1305|M.abscessus_ATCC_1997      -TATDELGRLVVDVALSPSPKPLYAKGSNAPIIMTAQRLLPARLFLKFLA
MLBr_00862|M.leprae_Br4923          RYGPDKVADTILSAIKKNKPIRPVAPEAYALYGISRVLPQVLRSTARIRV
                                       .   .                     .                    

MSMEG_3426|M.smegmatis_MC2_155      LSRSTDFADGAQLAST-------
MAV_1976|M.avium_104                LSRSTDFPDGHQIAAS-------
MMAR_1614|M.marinum_M               LTAGTNLTP--------------
MUL_3423|M.ulcerans_Agy99           LTAGTNLTP--------------
TH_3670|M.thermoresistible__bu      IAVLAQG----------------
Mvan_0982|M.vanbaalenii_PYR-1       VAIEAQG----------------
Mflv_0295|M.gilvum_PYR-GCK          LSMSTAADDVSPEQLDPLGSASR
Mb1914c|M.bovis_AF2122/97           KSLATLEPKRK------------
Rv1882c|M.tuberculosis_H37Rv        KSLATLEPKRK------------
MAB_1305|M.abscessus_ATCC_1997      RMHGLKVR---------------
MLBr_00862|M.leprae_Br4923          I----------------------