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SAETDAPRALLRLYDEALPVVYGYFVRRCGDRGTAEDLTSETFLAAMDAARKPSPPPMTVPWLIGVARHK LADHYRRRHDRFSVPVAELPEPDDPADNWDAAVDRIVAEAVLARLPEQHRTVLALRYMDDCSVPECAELI GRTVHATEALLVRARKAFRAQYPRDSQSEGGAP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1418 | - | - | 100% (174) | RNA polymerase ECF-type sigma factor |
| M. smegmatis MC2 155 | MSMEG_5214 | - | 1e-10 | 31.34% (134) | RNA polymerase sigma-70 factor |
| M. smegmatis MC2 155 | MSMEG_1486 | - | 2e-09 | 30.46% (151) | RNA polymerase sigma factor SigL |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0756 | sigL | 9e-12 | 33.53% (173) | RNA polymerase sigma factor SigL |
| M. gilvum PYR-GCK | Mflv_5063 | - | 1e-76 | 82.63% (167) | ECF subfamily RNA polymerase sigma-24 factor |
| M. tuberculosis H37Rv | Rv0735 | sigL | 1e-11 | 33.53% (173) | RNA polymerase sigma factor SigL |
| M. leprae Br4923 | MLBr_01448 | - | 3e-10 | 31.39% (137) | RNA polymerase sigma factor SigC |
| M. abscessus ATCC 19977 | MAB_4652 | - | 2e-14 | 35.37% (147) | putative RNA polymerase sigma factor |
| M. marinum M | MMAR_3051 | sigC | 3e-10 | 31.25% (144) | RNA polymerase sigma factor, SigC |
| M. avium 104 | MAV_4415 | - | 2e-12 | 31.06% (161) | RNA polymerase sigma factor, sigma-70 family protein |
| M. thermoresistible (build 8) | TH_1898 | - | 2e-74 | 78.29% (175) | RNA polymerase ECF-type sigma factor |
| M. ulcerans Agy99 | MUL_2295 | sigC | 2e-10 | 31.25% (144) | RNA polymerase sigma factor SigC |
| M. vanbaalenii PYR-1 | Mvan_1293 | - | 9e-80 | 82.49% (177) | ECF subfamily RNA polymerase sigma-24 factor |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5063|M.gilvum_PYR-GCK ---MSADSEGAASEGAVPEGLDAPSALLALYDEALPAVYGYFVRRCGDRG
Mvan_1293|M.vanbaalenii_PYR-1 ---MSAE----------PDGEHAPRALLALYDEALPAVYGYFVRRCGDRG
MSMEG_1418|M.smegmatis_MC2_155 ---MSAET-------------DAPRALLRLYDEALPVVYGYFVRRCGDRG
TH_1898|M.thermoresistible__bu ---VSVE----------PDPQPAPQALLDLYDEALPVVYGYFVRRCADRA
MAB_4652|M.abscessus_ATCC_1997 -MMTQRDPTTRRGLRAVSSGGDHYADWQSVYEDNAVWIYRTIYARVGNKP
MAV_4415|M.avium_104 -MAARNEPVGPRPLRAVPEGG--YPDWEAVYSDNAAWVYRTLFARVGNRA
Mb0756|M.bovis_AF2122/97 ------------MARVSGAAAAEAALMRALYDEHAAVLWRYALRLTGDAA
Rv0735|M.tuberculosis_H37Rv ------------MARVSGAAAAEAALMRALYDEHAAVLWRYALRLTGDAA
MMAR_3051|M.marinum_M --MTTSPDDEAVTALALAAADGDARAFEAFIKATQQDVWRFVAYLS-DAG
MUL_2295|M.ulcerans_Agy99 MPMTTSPDDEAVTALALAAADGDARAFEAFIKATQQDVWRFVAYLS-DAG
MLBr_01448|M.leprae_Br4923 --MIASSGDEAVTDLALAAARGSKRALEAFIKATQQDVWRFVAYLS-DVG
. . :: :
Mflv_5063|M.gilvum_PYR-GCK TAEDLTSETFLAAMDAARKPSPPD-LSVRWLIGVARHKLADHYRRRWDRF
Mvan_1293|M.vanbaalenii_PYR-1 TAEDLTSETFLAAMDAARKPSPPA-LTVPWLIGVARHKLADHYRRRHDRF
MSMEG_1418|M.smegmatis_MC2_155 TAEDLTSETFLAAMDAARKPSPPP-MTVPWLIGVARHKLADHYRRRHDRF
TH_1898|M.thermoresistible__bu TAEDLTSETFLAAMDAAHRDAHTP-ISVPWLIGVARHKLADHYRRRHHRQ
MAB_4652|M.abscessus_ATCC_1997 DAEDLTAEVFLAALRPLRLTVTKA-EVRAYLRTTARTVLAAHWRETLGRE
MAV_4415|M.avium_104 DAEDLTAEVFLAALRPLRLTASAA-EVRAYLRATARTVLAAHWRETLGRE
Mb0756|M.bovis_AF2122/97 QAEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRN
Rv0735|M.tuberculosis_H37Rv QAEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRN
MMAR_3051|M.marinum_M SADDLTQETFLRAIGAIRRFGGRS-SARTWLLAIARRVVADHIRHLQAR-
MUL_2295|M.ulcerans_Agy99 SADDLTQETFLRAIGAIRRFGGRS-SARTWLLAIARRVVADHIRHLQAR-
MLBr_01448|M.leprae_Br4923 NADDLTQETFLRAIGAIERFSGHS-SGRTWLLAIARRVVADHIRRAQTR-
*:*:. *.:* * . :* ** : . * *
Mflv_5063|M.gilvum_PYR-GCK ATPVAELPE--PADPADEWDAELDRIVAEQVLTRLSDPHRAVLVLRYMDG
Mvan_1293|M.vanbaalenii_PYR-1 TVPVADPPD--TAEPDDTWDAQLDRIVAEQVLARLPAQHRAVLTLRYMDD
MSMEG_1418|M.smegmatis_MC2_155 SVPVAELPE--PDDPADNWDAAVDRIVAEAVLARLPEQHRTVLALRYMDD
TH_1898|M.thermoresistible__bu SVSVAEVPE--PDEPTDQWDAELDRIVAESVLARLPDQHRTVLALRYLDD
MAB_4652|M.abscessus_ATCC_1997 ITSIPDTQDIADQPPEADEPISTAPEHARAVLAALPENYRRILELRFLQC
MAV_4415|M.avium_104 ITSIEDIE----QPPEHPDAISTAPQRVARVLDSLPDRYRRILESRFLQG
Mb0756|M.bovis_AF2122/97 VVGSTDQSGTPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRG
Rv0735|M.tuberculosis_H37Rv VVGSTDQSGTPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRG
MMAR_3051|M.marinum_M PRAAHGVDPELLLDRGRRARGFEDLVEVTTMIAQLTSDQREALLLTQLLG
MUL_2295|M.ulcerans_Agy99 PRAAHGVDPELLLDRGRRARGFEDLVEVTTMIAQLTSDQREALLLTQLLG
MLBr_01448|M.leprae_Br4923 PRTTFDGYPERMLNADRHARGFEDLVEVTTMIANLATEQREALLLTQLLG
: *. * :
Mflv_5063|M.gilvum_PYR-GCK CSVPECAELIGRTVHATEALLVRARRAFRAMYPE---PEGGLS-
Mvan_1293|M.vanbaalenii_PYR-1 CTVGECAELIGRTVHATEALLVRARRAFRAQYPR---PEGGLP-
MSMEG_1418|M.smegmatis_MC2_155 CSVPECAELIGRTVHATEALLVRARKAFRAQYPRDSQSEGGAP-
TH_1898|M.thermoresistible__bu CSVPECAHLIGRTVHATEALLVRARRAFRRAYPD---REGGTS-
MAB_4652|M.abscessus_ATCC_1997 CSIKESAARIGTTVANAKVLQHRALRLAAQINDQ------DAS-
MAV_4415|M.avium_104 NSIKEAAAELGISVANAKVLQHRALRLAAQVNEG------GRP-
Mb0756|M.bovis_AF2122/97 WSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQE-----LGVTR
Rv0735|M.tuberculosis_H37Rv WSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQE-----LGVTR
MMAR_3051|M.marinum_M LSYTDAAAVCGCPVGTIRSRVARARDALLADNER-----DDLTG
MUL_2295|M.ulcerans_Agy99 LSYTDAAAVCGCPVGTIRSRVARARDALLADNER-----DDLTG
MLBr_01448|M.leprae_Br4923 LPYADAAAVCGCPVGTIRSRVARARDALLADTEH-----NHLTG
. : * * . . * .