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SAEPDGEHAPRALLALYDEALPAVYGYFVRRCGDRGTAEDLTSETFLAAMDAARKPSPPALTVPWLIGVA RHKLADHYRRRHDRFTVPVADPPDTAEPDDTWDAQLDRIVAEQVLARLPAQHRAVLTLRYMDDCTVGECA ELIGRTVHATEALLVRARRAFRAQYPRPEGGLP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1293 | - | - | 100% (174) | ECF subfamily RNA polymerase sigma-24 factor |
| M. vanbaalenii PYR-1 | Mvan_1350 | - | 7e-14 | 37.88% (132) | RNA polymerase sigma factor SigL |
| M. vanbaalenii PYR-1 | Mvan_0162 | - | 2e-06 | 22.45% (147) | ECF subfamily RNA polymerase sigma-24 factor |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0756 | sigL | 6e-13 | 32.93% (167) | RNA polymerase sigma factor SigL |
| M. gilvum PYR-GCK | Mflv_5063 | - | 2e-78 | 83.04% (171) | ECF subfamily RNA polymerase sigma-24 factor |
| M. tuberculosis H37Rv | Rv0735 | sigL | 7e-13 | 32.93% (167) | RNA polymerase sigma factor SigL |
| M. leprae Br4923 | MLBr_01448 | - | 2e-09 | 29.93% (137) | RNA polymerase sigma factor SigC |
| M. abscessus ATCC 19977 | MAB_4652 | - | 9e-14 | 33.33% (147) | putative RNA polymerase sigma factor |
| M. marinum M | MMAR_1073 | sigL | 3e-11 | 32.10% (162) | alternative RNA polymerase sigma factor (RpoE), SigL |
| M. avium 104 | MAV_4431 | - | 5e-12 | 31.58% (152) | RNA polymerase sigma factor SigL |
| M. smegmatis MC2 155 | MSMEG_1418 | - | 9e-80 | 82.49% (177) | RNA polymerase ECF-type sigma factor |
| M. thermoresistible (build 8) | TH_1898 | - | 1e-71 | 75.58% (172) | RNA polymerase ECF-type sigma factor |
| M. ulcerans Agy99 | MUL_0831 | sigL | 1e-10 | 31.48% (162) | RNA polymerase sigma factor SigL |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1293|M.vanbaalenii_PYR-1 --MSAE----------PDGEHAPRALLALYDEALPAVYGYFVRRCGDRGT
Mflv_5063|M.gilvum_PYR-GCK --MSADSEGAASEGAVPEGLDAPSALLALYDEALPAVYGYFVRRCGDRGT
MSMEG_1418|M.smegmatis_MC2_155 --MSAET-------------DAPRALLRLYDEALPVVYGYFVRRCGDRGT
TH_1898|M.thermoresistible__bu --VSVE----------PDPQPAPQALLDLYDEALPVVYGYFVRRCADRAT
Mb0756|M.bovis_AF2122/97 --MARVSGAA---------AAEAALMRALYDEHAAVLWRYALRLTGDAAQ
Rv0735|M.tuberculosis_H37Rv --MARVSGAA---------AAEAALMRALYDEHAAVLWRYALRLTGDAAQ
MAV_4431|M.avium_104 --MVGISRASG--------TAEAALMKALYDEHAAVLWRYALRLTGDASQ
MMAR_1073|M.marinum_M --MARVAGGG---------AAEAALMQALYDEHAAVLWRYAMRLTSDASY
MUL_0831|M.ulcerans_Agy99 --MARVAGGG---------AAEAALMQALYDEHAAVLWRYTMRLTSDASY
MAB_4652|M.abscessus_ATCC_1997 MMTQRDPTTRRGLRAVSSGGDHYADWQSVYEDNAVWIYRTIYARVGNKPD
MLBr_01448|M.leprae_Br4923 -MIASSGDEAVTDLALAAARGSKRALEAFIKATQQDVWRFVAYLS-DVGN
. . :: :
Mvan_1293|M.vanbaalenii_PYR-1 AEDLTSETFLAAMDAARKPSPPA-LTVPWLIGVARHKLADHYRRRHDRFT
Mflv_5063|M.gilvum_PYR-GCK AEDLTSETFLAAMDAARKPSPPD-LSVRWLIGVARHKLADHYRRRWDRFA
MSMEG_1418|M.smegmatis_MC2_155 AEDLTSETFLAAMDAARKPSPPP-MTVPWLIGVARHKLADHYRRRHDRFS
TH_1898|M.thermoresistible__bu AEDLTSETFLAAMDAAHRDAHTP-ISVPWLIGVARHKLADHYRRRHHRQS
Mb0756|M.bovis_AF2122/97 AEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRNV
Rv0735|M.tuberculosis_H37Rv AEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRNV
MAV_4431|M.avium_104 SEDVVQETLLRAWQHPEVIGDTERSARAWLFTVARNMIIDDRRSARFRNV
MMAR_1073|M.marinum_M ADDIVQETLLRAWQHPEVIDERGRSARAWLFTVARNMIIDDRRSARYRYV
MUL_0831|M.ulcerans_Agy99 ADDIVQETLLRAWQHPEVIDERGRSARAWLFTVARNMIIDDRRSARYRYV
MAB_4652|M.abscessus_ATCC_1997 AEDLTAEVFLAALRPLR-LTVTKAEVRAYLRTTARTVLAAHWRETLGREI
MLBr_01448|M.leprae_Br4923 ADDLTQETFLRAIGAIERFSGHS-SGRTWLLAIARRVVADHIRRAQTRPR
::*:. *.:* * . :* ** : . * *
Mvan_1293|M.vanbaalenii_PYR-1 VPVADPPDTAE--PDDTWDAQLDRIVAEQVLARLPAQHRAVLTLRYMDDC
Mflv_5063|M.gilvum_PYR-GCK TPVAELPEPAD--PADEWDAELDRIVAEQVLTRLSDPHRAVLVLRYMDGC
MSMEG_1418|M.smegmatis_MC2_155 VPVAELPEPDD--PADNWDAAVDRIVAEAVLARLPEQHRTVLALRYMDDC
TH_1898|M.thermoresistible__bu VSVAEVPEPDE--PTDQWDAELDRIVAESVLARLPDQHRTVLALRYLDDC
Mb0756|M.bovis_AF2122/97 VGSTDQSGTPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGW
Rv0735|M.tuberculosis_H37Rv VGSTDQSGTPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGW
MAV_4431|M.avium_104 VGSTDTAGAPEQSTPDEVNAALDRLLIADAMAQLSAEHRAVIERSYYRGW
MMAR_1073|M.marinum_M VSSTDADGAPEQSTPDEVGAALDRLLIADALAQLSGEHRAVIERSYYRGW
MUL_0831|M.ulcerans_Agy99 VSSTDADGAPEQSTPDEVGAALGRLLIADALAQLSGEHRAVIERSYYRGW
MAB_4652|M.abscessus_ATCC_1997 TSIPDTQDIADQPPEADEPISTAPEHARAVLAALPENYRRILELRFLQCC
MLBr_01448|M.leprae_Br4923 TTFDGYPERMLN-ADRHARGFEDLVEVTTMIANLATEQREALLLTQLLGL
. . :: *. * :
Mvan_1293|M.vanbaalenii_PYR-1 TVGECAELIGRTVHATEALLVRARRAFRAQYPR---PEGGLP
Mflv_5063|M.gilvum_PYR-GCK SVPECAELIGRTVHATEALLVRARRAFRAMYPE---PEGGLS
MSMEG_1418|M.smegmatis_MC2_155 SVPECAELIGRTVHATEALLVRARKAFRAQYPRDSQSEGGAP
TH_1898|M.thermoresistible__bu SVPECAHLIGRTVHATEALLVRARRAFRRAYPD---REGGTS
Mb0756|M.bovis_AF2122/97 STAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR----
Rv0735|M.tuberculosis_H37Rv STAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR----
MAV_4431|M.avium_104 TTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR----
MMAR_1073|M.marinum_M TTAQIAKDLEIAEGTVKSRLHYAVRALRLTLQELGVTR----
MUL_0831|M.ulcerans_Agy99 TTAQIAKDLEIAEGTVKSRLHYAVRALRLTLQELGVTR----
MAB_4652|M.abscessus_ATCC_1997 SIKESAARIGTTVANAKVLQHRALRLAAQINDQDAS------
MLBr_01448|M.leprae_Br4923 PYADAAAVCGCPVGTIRSRVARARDALLADTEHNHLTG----
. : * . . *