For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TLAHTIRTALDVTLAGLQEGDPVPAERELAARFGVARETVRQALHELLVAGRIERRGRGTVVARPKLVHA LSLQSYTEGAQTVGRTPGRMLVTREIIEASTELASGLDIATGAPVLHLERVLLADDQRIGLESTYLAAAR FGRFEHDFDPATSLYAAIRATGVEFASATERIETALPTPREATLLECTTALPMLLLNRCSVDTDGVAIEV VRALYRGDRVAFETVLT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0286 | - | - | 100% (228) | GntR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_0650 | - | 1e-56 | 53.39% (221) | GntR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_4659 | - | 2e-18 | 29.38% (211) | GntR-family protein transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0816c | - | 1e-13 | 30.56% (216) | GntR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2603 | - | 2e-17 | 29.46% (224) | UbiC transcription regulator-associated domain-containing |
| M. tuberculosis H37Rv | Rv0792c | - | 1e-13 | 30.56% (216) | GntR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1498c | - | 6e-78 | 66.37% (223) | GntR family transcriptional regulator |
| M. marinum M | MMAR_2560 | - | 9e-15 | 31.03% (232) | GntR family transcriptional regulator |
| M. avium 104 | MAV_5032 | - | 8e-17 | 31.08% (222) | GntR-family protein transcriptional regulator |
| M. thermoresistible (build 8) | TH_3932 | - | 7e-19 | 34.62% (208) | PUTATIVE transcriptional regulator, GntR family |
| M. ulcerans Agy99 | MUL_0525 | - | 1e-14 | 29.19% (209) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_0056 | - | 2e-88 | 75.34% (223) | UbiC transcription regulator-associated domain-containing |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0816c|M.bovis_AF2122/97 MTS----VKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLP
Rv0792c|M.tuberculosis_H37Rv MTS----VKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLP
MMAR_2560|M.marinum_M MTSDEDSPRHDLADADLRVTRGSVPASVQLAELLRTQILERALSPGSRLP
MSMEG_0286|M.smegmatis_MC2_155 -------------------------MTLAHTIRTALDVTLAGLQEGDPVP
Mvan_0056|M.vanbaalenii_PYR-1 -----------------------MNVPKPYLVRTGLDGILDGLQEGDPFP
MAB_1498c|M.abscessus_ATCC_199 -------------------MTADVRLPKHYQVRTELEHILSALNEGDPVP
Mflv_2603|M.gilvum_PYR-GCK -----------MPLTVELDRSSPVPLYYQLAQAIEAAIRDGELAPGDRFE
MUL_0525|M.ulcerans_Agy99 ------MEGSQVLQLGQIDRADDKPPYRQIASMLRGAIISGELEAGGRLP
TH_3932|M.thermoresistible__bu -----MTRTATPMRSTTINRFADRPLYRQLSEVLEARLIERAR-PGDRLP
MAV_5032|M.avium_104 ----------------------------MLRSQILEGAYGGLAAARPALP
.
Mb0816c|M.bovis_AF2122/97 SERELIDRSGLSRVTVRAAVGMLQRQGWLVRRQGLGTFVADPV-------
Rv0792c|M.tuberculosis_H37Rv SERELIDRSGLSRVTVRAAVGMLQRQGWLVRRQGLGTFVADPV-------
MMAR_2560|M.marinum_M TEQELIARSGVSRSTVRAAVGILEDEGWLVRRQGLGTFVAEPV-------
MSMEG_0286|M.smegmatis_MC2_155 AERELAARFGVARETVRQALHELLVAGRIERR-GRGTVVARPK-------
Mvan_0056|M.vanbaalenii_PYR-1 PERELAARFGVARETVRQALHELLVEGRIERR-GRGTVVSRPK-------
MAB_1498c|M.abscessus_ATCC_199 PERDLAERFAVSRETVRQALHELLVEGRIERR-GRGTVVAAPK-------
Mflv_2603|M.gilvum_PYR-GCK NELALAKRLTLSRPTTRRAIQELVDKGLLVRKRGVGTQVVQN--------
MUL_0525|M.ulcerans_Agy99 SEAELIEYFGVARMTVRQAVQELRTEGLVISEHGRGVFVRPAPPIRWLAS
TH_3932|M.thermoresistible__bu SEAELSGQFGVNRLTVRRALHELAQRGIIETVHGRGSFVARQPVR-----
MAV_5032|M.avium_104 SESALAAELGVSRNAIREALELLRGEGLITRVQGSGTFVTGAK-------
* * : * : * *: * * : * * *
Mb0816c|M.bovis_AF2122/97 ----EQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGL--
Rv0792c|M.tuberculosis_H37Rv ----EQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGL--
MMAR_2560|M.marinum_M ----KQDLESGVRTITEVLLSRGVTPRVEVLSHAVVAAPQSVGAALGR--
MSMEG_0286|M.smegmatis_MC2_155 ----LVHALS-LQSYTEGAQTVGRTPGRMLVTREIIEASTELASGLDIAT
Mvan_0056|M.vanbaalenii_PYR-1 ----LVQPLS-LRSYTEGAQRMGRTPGRLLVTWENITVDAEIAAALDVSP
MAB_1498c|M.abscessus_ATCC_199 ----LLQPLS-LRSYTEGAQSQGRTPGRLLVTWENITGDADLCRDLGIRG
Mflv_2603|M.gilvum_PYR-GCK ----PVHRRVELTSLFDDLARAGQEPTTRLLKYHIGPPDEDVARELNLAE
MUL_0525|M.ulcerans_Agy99 DRFARQHRANGKAAFTVEAERSGHTPQVDNITVSREKPDSVVAERLRLTA
TH_3932|M.thermoresistible__bu ----YRLSATRDASFTRGMRELGHPVRIEVLGAETTRCRR---LRTELHT
MAV_5032|M.avium_104 ----LRQDLNRLKGLAESLAGHRLPVENKVLSIRESTATPFVAAKLQLPE
:
Mb0816c|M.bovis_AF2122/97 -VEVLCIRRRIRTGDQPLALVTAYLPPGVG-PAVEPLLSGSADTETTYAM
Rv0792c|M.tuberculosis_H37Rv -VEVLCIRRRIRTGDQPLALVTAYLPPGVG-PAVEPLLSGSADTETTYAM
MMAR_2560|M.marinum_M -SEVLRIQRRYSESDQPLAIVTCYLPADLPHDAVEPLLSATSATATTYTM
MSMEG_0286|M.smegmatis_MC2_155 GAPVLHLERVLLADDQRIGLESTYLA-----AARFGRFEHDFDPATSLYA
Mvan_0056|M.vanbaalenii_PYR-1 SARVMHLERVLLADDVRIGLESTYLP-----RHRFGDLEQHFDPTTSLYS
MAB_1498c|M.abscessus_ATCC_199 GSTVIHLERVLLADGAKLGLESTYLA-----KARFAELRNTFDPSTSLYA
Mflv_2603|M.gilvum_PYR-GCK GREVASIQRLRCANGEPLALMTNHLP-------ADIAPDAEELGNIGLYQ
MUL_0525|M.ulcerans_Agy99 DDEVVVRSRRYLADGKPVETATSYIP---VAFAQGTKIEQTDTGPGGIYA
TH_3932|M.thermoresistible__bu AGEVLTTTTLRHVDGQPWSVSVTSIA-----LDRFPGIAQQWSGSTSLFD
MAV_5032|M.avium_104 NAPILFIERLRSVGGLPLSLDTTSLR-------IGAIRIDADLDKQDVFA
: .. :
Mb0816c|M.bovis_AF2122/97 WERR-LGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDG
Rv0792c|M.tuberculosis_H37Rv WERR-LGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDG
MMAR_2560|M.marinum_M WEQR-LGVRISSATHEIQAAGASPEIAAALGLSEGAPVLVLRRTSYTDGD
MSMEG_0286|M.smegmatis_MC2_155 AIRA-TGVEFASATERIETALPTPREATLLECTTALPMLLLNRCSVDTDG
Mvan_0056|M.vanbaalenii_PYR-1 AIRA-RGVKFGSATERIETVLPSPREAELLESTTAMPMLLLNRRSVDVDG
MAB_1498c|M.abscessus_ATCC_199 AIRA-LGVQFGSAVERIETVLASPREASLLDTSIAMPMLLMNRRTLDTDG
Mflv_2603|M.gilvum_PYR-GCK ALRA-RGVHIRLARQRIGARSATRAEAHLLDEKPNAPLLTMARTAFDDSG
MUL_0525|M.ulcerans_Agy99 RFEE-AGHTLARFNEEVGARMPTPEERRALQLPPGAPVLTVVRTAYDTKD
TH_3932|M.thermoresistible__bu FLWQTFGVRMRRAYRSFSAVLADLAEAQHLGLRTGAPVLEMRGLNVDQHG
MAV_5032|M.avium_104 LIEQELGERLGWAEITVESVLADPNTATLLQIRTGAPLLLLHRLTHLRDG
* : . : . * *:* : .
Mb0816c|M.bovis_AF2122/97 KPLEVVVFHHRPERYQFSVTLPRTLPGSGAGIIEKRDFA
Rv0792c|M.tuberculosis_H37Rv KPLEVVVFHHRPERYQFSVTLPRTLPGSGAGIIEKRDFA
MMAR_2560|M.marinum_M KPLEVVLFHHRPERYEFCVTLPRTMPGQRAGMTER----
MSMEG_0286|M.smegmatis_MC2_155 VAIEVVRALYRGDRVAFETVLT-----------------
Mvan_0056|M.vanbaalenii_PYR-1 VPIEVVRALYRGDRVAFEATLDDR---------------
MAB_1498c|M.abscessus_ATCC_199 RPIERVRSLFRGDRVAFEAVLKE----------------
Mflv_2603|M.gilvum_PYR-GCK AAVEFGNHCYRASRYYFDTTLVDR---------------
MUL_0525|M.ulcerans_Agy99 VAVEVCDTVKVASAYLLEYDFSAR---------------
TH_3932|M.thermoresistible__bu APVAVVRHRFRGDRVELTVDLA-----------------
MAV_5032|M.avium_104 TPFDLETVRYRGDRCSLVTTATREDAPPQ----------
.. . :