For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAMDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAELNSTAQGYLTVITQLSSEEWMGPASATMAQA VEPYMTWMSVTAGQAEHAATQAQSAAAAFETAFAAVVPPPLIATNRAELTQALQTNMFGLNNGVIAQLEA QYAEMWAQDASAMYNYAASSALATKIESFTEAPTIANPAASTTQGAAVSAAQATSAASTQSTVQSFLSQI TSQLGQLASPSGTQSFVSQLGASNPILTEIWFLLTGQTVLPNNLGTFMQGYSNYASFFYNTEGLPYFSVG MGNFGVQMAKTLGLITQPAAAAAAALPKVPGLGGALGAIGSAGSQVAAGLGSGAHVGHLAVPASWPGASV AEAVRPTVQAVSEPITSPEAANVIGGMPVGATGAGRGVGSGPRYGFKPTVMARPLPAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2671 | - | - | 100% (408) | PPE family protein, PPE26 |
M. marinum M | MMAR_1904 | - | 6e-99 | 47.43% (409) | PPE family protein |
M. marinum M | MMAR_2516 | - | 7e-95 | 48.07% (414) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1817 | PPE26 | 1e-113 | 55.66% (415) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 3e-25 | 32.41% (216) | PPE protein |
M. tuberculosis H37Rv | Rv1789 | PPE26 | 1e-113 | 55.66% (415) | PPE family protein |
M. leprae Br4923 | MLBr_01182 | - | 9e-45 | 31.46% (426) | PPE-family protein |
M. abscessus ATCC 19977 | MAB_4783 | - | 2e-28 | 27.65% (405) | PPE family protein |
M. avium 104 | MAV_2926 | - | 1e-112 | 53.49% (415) | PPE family protein |
M. smegmatis MC2 155 | MSMEG_0619 | - | 1e-29 | 29.83% (409) | PPE family protein |
M. thermoresistible (build 8) | TH_3113 | - | 4e-32 | 29.30% (413) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_3087 | - | 0.0 | 99.26% (406) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 5e-29 | 29.11% (395) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2671|M.marinum_M -----------MAMDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAE MUL_3087|M.ulcerans_Agy99 -------------MDYGMLPPEVTSALMYAGPGSSSMVAAASAWNALAAE Mb1817|M.bovis_AF2122/97 -------------MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAE Rv1789|M.tuberculosis_H37Rv -------------MDFGALPPEVNSVRMYAGPGSAPMVAAASAWNGLAAE MAV_2926|M.avium_104 -----------MMLDYGTFPPEFNSARIYSGPGSGSLVAAASAWSSLAAE MLBr_01182|M.leprae_Br4923 ------------MFDFAALSPETNSTRMYLGPGSSPILTAAAAWVVLAKE Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE MAB_4783|M.abscessus_ATCC_1997 ----------MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTE TH_3113|M.thermoresistible__bu ----------------MALPPEVHSTLLRTGPGPGALSAAADAWRMLSDE .** * : ***...: :*. :* *: * MMAR_2671|M.marinum_M LNSTAQGYLTVITQLSSEEWMGPASATMAQAVEPYMTWMSVTAGQAEHAA MUL_3087|M.ulcerans_Agy99 LNSTAQGYLTVITQLSSEEWMGPASATMAQAVEPFMTWMSVTAGQAEHAA Mb1817|M.bovis_AF2122/97 LSSAATGYETVITQLSSEGWLGPASAAMAEAVAPYVAWMSAAAAQAEQAA Rv1789|M.tuberculosis_H37Rv LSSAATGYETVITQLSSEGWLGPASAAMAEAVAPYVAWMSAAAAQAEQAA MAV_2926|M.avium_104 LNAAALSYDKVVTALASEEWLGSASASMASAVAPYVGWMSTTAAQAEEAA MLBr_01182|M.leprae_Br4923 LTAAAQGLQSAVEALLTT-FEGESAAALAERVTPYEKWLTQNAASAELTA Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA MAB_4783|M.abscessus_ATCC_1997 YSSAANELTTTLGSVRAGVWDGASAEQYQTAHVPYLSWLHETSAVSAGVA TH_3113|M.thermoresistible__bu YRAAAVELAAVVSQTCATAWEGVGADAYAAAHGPYLFWLTDTAAAAAAAG ::* : : : * .: *: *: :. . .. MMAR_2671|M.marinum_M TQAQSAAAAFETAFAAVVPPPLIATNRAELTQALQTNMFGLNNGVIAQLE MUL_3087|M.ulcerans_Agy99 TQAQSAAAAFETAFAAVVPPPLIATNLAELTQALQTNMFGLNNGVIAQLE Mb1817|M.bovis_AF2122/97 TQARAAAAAFEAAFAATVPPPLIAANRASLMQLISTNVFGQNTSAIAAAE Rv1789|M.tuberculosis_H37Rv TQARAAAAAFEAAFAATVPPPLIAANRASLMQLISTNVFGQNTSAIAAAE MAV_2926|M.avium_104 SQARAAAAAYEAALAASVPPPLIAANRMQVSQLQATNVLGQNTPLIAQLE MLBr_01182|M.leprae_Br4923 TQLTVAANAYETAFTMTVPPLMVFVNRAQACLLIMSNIFGQNSTAIAEKE Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE MAB_4783|M.abscessus_ATCC_1997 AQTETAATAYSEALATMPTLGELAANHATHGALVATNFFGINTIPIAVNE TH_3113|M.thermoresistible__bu AQLEAAAAAHASALAAMPTMAELTANRTTHAALVATNFFGVNTIPIAVNE * ** *. *:: . : * :*.:* *. ** * MMAR_2671|M.marinum_M AQYAEMWAQDASAMYNYAASSALATKIES-FTEAPTIANPAASTTQGAAV MUL_3087|M.ulcerans_Agy99 AQYAEMWAQDASAMYNYAASSALATKIES-FTEAPTIASPAASTTQGAAV Mb1817|M.bovis_AF2122/97 AQYGEMWAQDSAAMYAYAGSSASASAVTP-FSTPPQIANPTAQGTQAAAV Rv1789|M.tuberculosis_H37Rv AQYGEMWAQDSAAMYAYAGSSASASAVTP-FSTPPQIANPTAQGTQAAAV MAV_2926|M.avium_104 AQYGEYWAQDAAAMYSYAGQSASASKVTP-FQKAPQVTNPSGQAAQSAAV MLBr_01182|M.leprae_Br4923 AEYTEMWIQDAAAMTSYQASVLEAVGATK-AFTAPPLGVNEVGLAQEVVE Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVGEAGRAAA Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVGEAGRAAA MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVGEAGSASA MAB_4783|M.abscessus_ATCC_1997 ADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSPDSGAAART-- TH_3113|M.thermoresistible__bu ADYARMWIQAATTMATYEAVASAAVSATPRTVAPPPILGAGTGESATAAI *:* . * * ::.* * . : .* : : . MMAR_2671|M.marinum_M SAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQLG-ASNPIL MUL_3087|M.ulcerans_Agy99 SAAQATSAASTQSTVQSFLSQITSQLGQLASPSGTQSFVSQLG-ASNPIL Mb1817|M.bovis_AF2122/97 ATAAGTAQST--------LTEMITGL-----PNALQSLTSPLLQSSNGPL Rv1789|M.tuberculosis_H37Rv ATAAGTAQST--------LTEMITGL-----PNALQSLTSPLLQSSNGPL MAV_2926|M.avium_104 STATANSTSTNTTKALQSLAQPASSS-----TTATKAATTAASTTSTDPL MLBr_01182|M.leprae_Br4923 EVVEEVVEEVVEAEQAISQAALDQAVNEGMEATVVPQVDQQVNVDVATPQ Mflv_0325|M.gilvum_PYR-GCK DMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRDPI Mvan_0415|M.vanbaalenii_PYR-1 DVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDPL MSMEG_0619|M.smegmatis_MC2_155 SVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGG-QAILDFLKDPL MAB_4783|M.abscessus_ATCC_1997 -----AAQDATKPPPIVPDPNDPIEMLLKNS-QHFLGMYRALKGLITDPV TH_3113|M.thermoresistible__bu TGAHVTAELRAAESRTLLDEINELIDRLFAP----LFPPGFADALPDGLL MMAR_2671|M.marinum_M TEIWFLLTGQT-VLPNNLGTFMQGYSNYASFFY----------------- MUL_3087|M.ulcerans_Agy99 TEIWFLLTGQT-VLPNNLGTFMQGYSNYASFFY----------------- Mb1817|M.bovis_AF2122/97 SWLWQILFGTP-NFPTSISALLTDLQPYASFFY----------------- Rv1789|M.tuberculosis_H37Rv SWLWQILFGTP-NFPTSISALLTDLQPYASFFY----------------- MAV_2926|M.avium_104 SEIWFLLTGQT-TLPTSLGSAVNGYSPFASLFY----------------- MLBr_01182|M.leprae_Br4923 TAVPDSSSAAAPQLWGGFAQHLSPINDTLSMIN----------------- Mflv_0325|M.gilvum_PYR-GCK GNTFALITDFLTNPVQALITWGPFLLAVVYQA----VSWVGASILYPSLF Mvan_0415|M.vanbaalenii_PYR-1 GNTIKLITDFLTNPAQALITWGPFLAAVAYQA----VSWVGASILYPSLL MSMEG_0619|M.smegmatis_MC2_155 GNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPF MAB_4783|M.abscessus_ATCC_1997 GTIVRIIIDFSTNPAAAIVTWTPLFYVFAYAA-----TFAVMGTPIYAAI TH_3113|M.thermoresistible__bu GTLLAPLLPGATGDGPPMATIMSFLLMGLSNP---AYLFPVLVYLLFTGV : MMAR_2671|M.marinum_M ------------------------------NTEGLPYFSVGMGNFGVQMA MUL_3087|M.ulcerans_Agy99 ------------------------------NTEGLPYFSVGMGNFGVQMA Mb1817|M.bovis_AF2122/97 ------------------------------NTEGLPYFSIGMGNNFIQAA Rv1789|M.tuberculosis_H37Rv ------------------------------NTEGLPYFSIGMGNNFIQSA MAV_2926|M.avium_104 ------------------------------NTEGLPYFSTGMANTFTQIA MLBr_01182|M.leprae_Br4923 ------------------------------NHAGMANAGLSLVNGMGSAM Mflv_0325|M.gilvum_PYR-GCK LLPLLATT--LAIVAGVGQHLLSLLNTPPAEEAAEEPAPAQSAPSRPDQQ Mvan_0415|M.vanbaalenii_PYR-1 LLPLVATT--LAIVLGVGAYLLENLPAPAEDAPAEEPAASSPAPTRADQP MSMEG_0619|M.smegmatis_MC2_155 LIPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAP----RTDQP MAB_4783|M.abscessus_ATCC_1997 MGPAAGISIPLAITLAS---LSQMPEAPPVDAPAETVPARIDQPHAVAMG TH_3113|M.thermoresistible__bu VHTTVAVSGMLAQLVPLMPALLPVAVAALGGLAGVWAGLSGLAGLAGLTA MMAR_2671|M.marinum_M KTLGLITQPAAAAAAALP-KVPGLGGALGAIGSAGSQVAAG----LGSGA MUL_3087|M.ulcerans_Agy99 KTLGLITQPAAAAAAALP-KVPGLGGALGAIGSAGSQVAAG----LGSGA Mb1817|M.bovis_AF2122/97 KTLGLIGSAAPAAVAAAGDAAKGLPGLGGMLG--GGPVAAG----LGNAA Rv1789|M.tuberculosis_H37Rv KTLGLIGSAAPAAVAAAGDAAKGLPGLGGMLG--GGPVAAG----LGNAA MAV_2926|M.avium_104 KSVGAIGGAAPAAAKAL----PGLGGLGGMLG--GGAAAAHPVAALGGAG MLBr_01182|M.leprae_Br4923 KSLAPTTTKAAESAFKAMGSAVQSTGRGLLGSSSGGHVTAQ----LGRAA Mflv_0325|M.gilvum_PYR-GCK SFPATMSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATFVPYVVAGRDP Mvan_0415|M.vanbaalenii_PYR-1 SPAIAVSAPPPPSSAAATVGTVATGTAPAPGAPAAATASFVPYAVAGRDP MSMEG_0619|M.smegmatis_MC2_155 -LAVGISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATFVPYAVANRDP MAB_4783|M.abscessus_ATCC_1997 GAPAPTASTAAP--TPTTTSPATPGSAPAP-TPPPAGAEGLGYAVRGDGP TH_3113|M.thermoresistible__bu VPAADGGASAAPVPAGGPSLPSGSSAPPAPTGSAAPTTGTAPGGAGSPPP . . MMAR_2671|M.marinum_M HVG-HLAVPASWPG-ASVAEAVRPTVQAVSEPITSPEAA----NVIGG-- MUL_3087|M.ulcerans_Agy99 HVG-HLAVPASWPG-ASVAEAVRPTVQAVSEPITSPEAA----NVIGG-- Mb1817|M.bovis_AF2122/97 SVG-KLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAA--PGSLLGG-- Rv1789|M.tuberculosis_H37Rv SVG-KLSVPPVWSGPLPGSVTPGAAPLPVSTVSAAPEAA--PGSLLGG-- MAV_2926|M.avium_104 SIGGKLSVPVAWSG-APATPALGHA-IPVSSISAAPEAAGGPGNLLGG-- MLBr_01182|M.leprae_Br4923 SIG-SLRVPQTWTTASQPVTAATRALSPARVAVATESES---APLLGGGL Mflv_0325|M.gilvum_PYR-GCK YEGFSPTVRDSTGAKAPAGTIPAAASGIAASAAERRKRRRRQKEEIKG-- Mvan_0415|M.vanbaalenii_PYR-1 GTGFSPTVRDSTSAKAPASGIPAAASGVAASAAERRKRRRRQKDEIAG-- MSMEG_0619|M.smegmatis_MC2_155 GEGFTPTLGNKSQVAAPASGVPAAASGVAASLASRRKRRRKKGAQIEE-- MAB_4783|M.abscessus_ATCC_1997 GFGFGPTIGASTGATAHAPSSAVSAAAALACNPATGKSRRRRRRTIDD-- TH_3113|M.thermoresistible__bu AGHSVPPAPHSAPPVGTSGPPYLIAAQPAPGVARRSAGARRAASIVEP-- : : MMAR_2671|M.marinum_M ----MPVGATGAGRGVGSGPRYGFKPTVMARPLPAG-------------- MUL_3087|M.ulcerans_Agy99 ----MPVGATGAGRGVGSGPRYGFKPTVMARPLPAG-------------- Mb1817|M.bovis_AF2122/97 ----LPLAGAGGAG---AGPRYGFRPTVMARPPFAG-------------- Rv1789|M.tuberculosis_H37Rv ----LPLAGAGGAG---AGPRYGFRPTVMARPPFAG-------------- MAV_2926|M.avium_104 ----MPLAGAGAGGHGAAGPKYGFRPTVMARPPFAG-------------- MLBr_01182|M.leprae_Br4923 PMAPMVPGGGSGTGGVNTALRLQPRAFVMPRNPAAG-------------- Mflv_0325|M.gilvum_PYR-GCK --RGYADAYADYEELPDDGPPEQPAPRVTASTRGAGPMGFAGTVSRG-DE Mvan_0415|M.vanbaalenii_PYR-1 --RAYADAYADYEPEPDDEPPVRQEPRIAATERGAGPMGFAGTVSRD-AA MSMEG_0619|M.smegmatis_MC2_155 --RGYADAYMDYEE-PDEDPAPQPEPRVRASERGSDAMGFTGTVTRH-DV MAB_4783|M.abscessus_ATCC_1997 --RGYRHEYATMDDHTPTGP--QDPVTAVASGTGAGRLGFAGVHTATTAV TH_3113|M.thermoresistible__bu --AGSAAAAAAARESAPIRRRRGQKDGLHGHRHEHQQPASMSAATAP--- MMAR_2671|M.marinum_M -------------------------------------------------- MUL_3087|M.ulcerans_Agy99 -------------------------------------------------- Mb1817|M.bovis_AF2122/97 -------------------------------------------------- Rv1789|M.tuberculosis_H37Rv -------------------------------------------------- MAV_2926|M.avium_104 -------------------------------------------------- MLBr_01182|M.leprae_Br4923 -------------------------------------------------- Mflv_0325|M.gilvum_PYR-GCK QAGGLTTLAGDSFGGGPREPMLPGTWDPDATDDRHTDGRDGHDGHDGKEK Mvan_0415|M.vanbaalenii_PYR-1 QAGGLTTLPGDPFGGGPKAPMLPGTWDPDTEPD------ERHNHHDGKDS MSMEG_0619|M.smegmatis_MC2_155 TAAGLTTLTGDTFDDRPVTPMLPGTWDGDENPAP------SPDDPEGGPR MAB_4783|M.abscessus_ATCC_1997 EATGLSTLDGDAEN--RTIPMLPGTWDVTDDDR----------------- TH_3113|M.thermoresistible__bu SAAGIRVLGGAGRISRTRGSVPHAEITPGDPTEPSSPTDRAHRPAEPN-- MMAR_2671|M.marinum_M - MUL_3087|M.ulcerans_Agy99 - Mb1817|M.bovis_AF2122/97 - Rv1789|M.tuberculosis_H37Rv - MAV_2926|M.avium_104 - MLBr_01182|M.leprae_Br4923 - Mflv_0325|M.gilvum_PYR-GCK P Mvan_0415|M.vanbaalenii_PYR-1 Q MSMEG_0619|M.smegmatis_MC2_155 R MAB_4783|M.abscessus_ATCC_1997 - TH_3113|M.thermoresistible__bu -