For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLRAGTPADDLER ALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAVANAIALRLGWRLFEPMLRSA TGLDELADADLRQAVTDEVARIIEPSGRG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1142 | - | - | 100% (169) | transcriptional regulator |
| M. marinum M | MMAR_4832 | - | 9e-08 | 34.12% (85) | TetR family transcriptional regulator |
| M. marinum M | MMAR_2297 | - | 3e-07 | 27.37% (179) | transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3439c | - | 1e-62 | 72.73% (165) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_1483 | - | 2e-08 | 43.24% (74) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3405c | - | 1e-62 | 72.73% (165) | transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_00316 | - | 5e-05 | 33.72% (86) | putative TetR/AcrR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_0085c | - | 2e-46 | 53.94% (165) | putative transcriptional regulator |
| M. avium 104 | MAV_4351 | - | 2e-60 | 70.55% (163) | putative HTH-type transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_0180 | - | 9e-40 | 57.93% (145) | putative HTH-type transcriptional regulator |
| M. thermoresistible (build 8) | TH_0912 | - | 1e-07 | 48.98% (49) | transcriptional regulator, TetR family protein |
| M. ulcerans Agy99 | MUL_0905 | - | 7e-92 | 99.41% (169) | transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_1492 | - | 1e-07 | 54.17% (48) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1142|M.marinum_M -----------------------------MLEAAADLFAERGPAATSIRD
MUL_0905|M.ulcerans_Agy99 -------MTTGSAIRSRKTPTGREEVAAAVLEAAADLFAERGPAATSIRD
Mb3439c|M.bovis_AF2122/97 -------MTTRPATDRRKMPTGREEVAAAILQAATDLFAERGPAATSIRD
Rv3405c|M.tuberculosis_H37Rv -------MTTRPATDRRKMPTGREEVAAAILQAATDLFAERGPAATSIRD
MAV_4351|M.avium_104 -------------------------MAAAILEAATDLFAERGPAATSIRD
MAB_0085c|M.abscessus_ATCC_199 -------MTTPEATDAK--PVGKEEVVEAVLTAASALFAEKGPAATSIRE
MSMEG_0180|M.smegmatis_MC2_155 -------MTTASGGQRD----AGARIRPVVLTHAADLFAERGPAATSLRD
MLBr_00316|M.leprae_Br4923 MSVPRSGLSVQMAQPARPLRADAARNRARILGVAYEAFATEGLSVP-IDE
Mvan_1492|M.vanbaalenii_PYR-1 -----------MTPPDRPVRADAARNRALLLAAAEEEFAERGPSAS-VAD
Mflv_1483|M.gilvum_PYR-GCK ------------------MDRALPSRRDELLQLAATMFADRGLRATTVRD
TH_0912|M.thermoresistible__bu --------------------MTGSERRQQLIEIAKSLFAERGYEGTSIEE
:: * ** .* . : :
MMAR_1142|M.marinum_M IAARSKVNHGLVFRHFGAKEQLVGAVL----DYLGTHLTELLRAG-TPAD
MUL_0905|M.ulcerans_Agy99 IAARSKVNHGLVFRHFGAKEQLVGAVL----DYLGTHLTELLRAG-TPAD
Mb3439c|M.bovis_AF2122/97 IAARSKVNHGLVFRHFGTKDQLVGAVL----DHLGTKLTRLLHSE-APAD
Rv3405c|M.tuberculosis_H37Rv IAARSKVNHGLVFRHFGTKDQLVGAVL----DHLGTKLTRLLHSE-APAD
MAV_4351|M.avium_104 IAARCGVNHGLVFRHFGTKEQLVGAVL----DHLGANLSALLATD-TPAE
MAB_0085c|M.abscessus_ATCC_199 VATRAGVNHGLVHRHFGSKRQLLAATL----QHLADTAAAVREAG-APIE
MSMEG_0180|M.smegmatis_MC2_155 VAERSGVNAGLIFRHIGNKEALVAAVL----DFLADELVTARGTD-APEE
MLBr_00316|M.leprae_Br4923 IARRAGVGAGTVYRHFPTKEALCAAVIGDRMPHLVDDGYVLLKSA-GPGE
Mvan_1492|M.vanbaalenii_PYR-1 IARRAGVAKGTVFRHFPTKEDLIAAIVSEHIAVLAAAARRLADSP-DPGA
Mflv_1483|M.gilvum_PYR-GCK IADSAGILSGSLYHHFKSKEQMVEEVLKDFLDWLFTRYDEIVAATTDPLE
TH_0912|M.thermoresistible__bu IALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLTNNRSRVR
:* . : :..*: * : : *
MMAR_1142|M.marinum_M DLERALDRQMR---VWARTLLDGYPAEQLQTRFPNVAELLGQVR--VHHG
MUL_0905|M.ulcerans_Agy99 DLERALDRQMR---VWARTLLDGYPAEQLQTRFPNVAELLGQVR--VHHG
Mb3439c|M.bovis_AF2122/97 IIERALDRHGR---VLARALLDGYPVGQLQQRFPNVAELLDAVR--PRYD
Rv3405c|M.tuberculosis_H37Rv IIERALDRHGR---VLARALLDGYPVGQLQQRFPNVAELLDAVR--PRYD
MAV_4351|M.avium_104 VVEQSLDRQMR---VMARTVLDGYPAGQLQKRFPNIATLLDGVR--PLHD
MAB_0085c|M.abscessus_ATCC_199 ELEAAHDLQLR---VMVRSTLDGFPIEELQERKPGMAWLLEQVR--PGHA
MSMEG_0180|M.smegmatis_MC2_155 VIEAHVERSWK---VIARALLDGYDVGALQHRFPVVEELVEAAR--QRHQ
MLBr_00316|M.leprae_Br4923 ALFTYLRSLVLHWGATDRGLVDALAGAGGIDILGVAPDAEDAFL--TILS
Mvan_1492|M.vanbaalenii_PYR-1 ALLEFLTIAADQRQRHDLTFLQSASDGD-----PRVTEVRDALH--ANLE
Mflv_1483|M.gilvum_PYR-GCK RVSGLFMVSFEAIEHRHAQVVIYQDEAKRLNSLPQFGFLDDRNRQQRRMW
TH_0912|M.thermoresistible__bu VERVALALLTYVEERTDGFRILIRDSPAAITSGTYSTLLNDAVNQVSSIL
:
MMAR_1142|M.marinum_M DDTTARLAVANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVAR
MUL_0905|M.ulcerans_Agy99 DDTTARLAVANAIALCLGWRLFEPMLRSATGLDELADADLRQAVTDEVAR
Mb3439c|M.bovis_AF2122/97 SDLGARLAVAHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVAR
Rv3405c|M.tuberculosis_H37Rv SDLGARLAVAHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVAR
MAV_4351|M.avium_104 DELHARLAVANALALQFGWRLFAPILRAATGIEELTDAELRRAAGAEVER
MAB_0085c|M.abscessus_ATCC_199 DERDARLAAAHAIALQLGWRLMGPSLRAGFGLDDMSDADMRAEIAQQIAK
MSMEG_0180|M.smegmatis_MC2_155 DDHAARAATADAIALQLGWRLFGPFLRAATGLDDNHPPAD----------
MLBr_00316|M.leprae_Br4923 D-LLYAAQYAGTARTDVGVREVKSILVG----CQAMEAYNSALAERVTDV
Mvan_1492|M.vanbaalenii_PYR-1 T-LVDRARTSGAIRADITEADVFLMMCAPIHIVENLPAPAPLLWQRYLAI
Mflv_1483|M.gilvum_PYR-GCK VEVLKQGIAEGSFRPDIDVDLVYRFIRDTTWVSVRWYQPGGPLTAEQVGR
TH_0912|M.thermoresistible__bu AGDFSRRGLDPEMAPLYAQALVGSVSMTAQWWLDVREPKKEVVAAHLVNL
.
MMAR_1142|M.marinum_M IIEPSGRG-------------
MUL_0905|M.ulcerans_Agy99 IIEPSGRG-------------
Mb3439c|M.bovis_AF2122/97 ILEPH----------------
Rv3405c|M.tuberculosis_H37Rv ILEPH----------------
MAV_4351|M.avium_104 ILRSPDPH-------------
MAB_0085c|M.abscessus_ATCC_199 IVTPH----------------
MSMEG_0180|M.smegmatis_MC2_155 ---------------------
MLBr_00316|M.leprae_Br4923 VVDGLRAAR------------
Mvan_1492|M.vanbaalenii_PYR-1 IFDGLRPDGAHPLPQPAPAAP
Mflv_1483|M.gilvum_PYR-GCK QYLAIVLGGITEGSK------
TH_0912|M.thermoresistible__bu CWNGLTHLEPDPVLHEE----