For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0912 | - | - | 100% (198) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_0452 | - | 2e-20 | 31.75% (189) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
| M. thermoresistible (build 8) | TH_1911 | - | 2e-11 | 25.00% (180) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1047 | - | 3e-98 | 89.85% (197) | TetR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_1947 | - | 1e-103 | 93.91% (197) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv1019 | - | 3e-98 | 89.85% (197) | TetR family transcriptional regulator |
| M. leprae Br4923 | MLBr_00815 | - | 1e-22 | 31.44% (194) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_1149 | - | 1e-93 | 84.77% (197) | TetR family transcriptional regulator |
| M. marinum M | MMAR_4466 | - | 5e-98 | 90.36% (197) | TetR family transcriptional regulator |
| M. avium 104 | MAV_1159 | - | 1e-100 | 92.39% (197) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_5424 | - | 1e-102 | 93.40% (197) | transcriptional regulator, TetR family protein |
| M. ulcerans Agy99 | MUL_4635 | - | 4e-98 | 90.36% (197) | TetR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_4778 | - | 1e-102 | 92.89% (197) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1947|M.gilvum_PYR-GCK ----------------------------------MTGSERRQQLIEIAKS
Mvan_4778|M.vanbaalenii_PYR-1 --------------MAVSDKRGGPDTHVRAPRARMTGTERRQQLVEIAKS
MSMEG_5424|M.smegmatis_MC2_155 ---------------------------MRAPRARMTGSERRQQLIEIAKS
TH_0912|M.thermoresistible__bu ----------------------------------MTGSERRQQLIEIAKS
MMAR_4466|M.marinum_M ----------------------MPEKEAKAPRARMTGSERRHQLIGIARS
MUL_4635|M.ulcerans_Agy99 ----------------------------------MTGSERRHQLIGIARS
Mb1047|M.bovis_AF2122/97 ----------------------------------MTGTERRHQLIGIARS
Rv1019|M.tuberculosis_H37Rv ----------------------------------MTGTERRHQLIGIARS
MAV_1159|M.avium_104 ------------MAVLDSQTHKDPDKEVRAPRARMTGSERRQQLIGIARS
MAB_1149|M.abscessus_ATCC_1997 -----------------MAVPSRPDVPGRTPRVRMAGSERRRQLIDVARS
MLBr_00815|M.leprae_Br4923 MNNLAKAAQRRTVRPIDRGRLSDDIATPNQRSNRLSRDKRRGQLLIVASD
:: :** **: :* .
Mflv_1947|M.gilvum_PYR-GCK LFAERGFDGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
Mvan_4778|M.vanbaalenii_PYR-1 LFAERGFDGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
MSMEG_5424|M.smegmatis_MC2_155 LFAERGYDGTSIEEVAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLQ
TH_0912|M.thermoresistible__bu LFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
MMAR_4466|M.marinum_M LFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
MUL_4635|M.ulcerans_Agy99 LFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
Mb1047|M.bovis_AF2122/97 LFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
Rv1019|M.tuberculosis_H37Rv LFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
MAV_1159|M.avium_104 LFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD
MAB_1149|M.abscessus_ATCC_1997 LFAERGYEATSIEEIAQRAGVSKPVVYEHFGGKEGLYAVVVDREMSVLLD
MLBr_00815|M.leprae_Br4923 VFVDHGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLERHMNNLVS
:*.::*:..:.::*:* **.*****:*:**..* ** .*::*.*. *:.
Mflv_1947|M.gilvum_PYR-GCK GITSSLADNRS-RVRVERVALALLTYVEERTDGFRILIRDSPASITQGTY
Mvan_4778|M.vanbaalenii_PYR-1 GITSSLADNRS-RVRVERVALALLTYVEEHTDGFRILIRDSPASITSGTY
MSMEG_5424|M.smegmatis_MC2_155 GITSSLTNNRS-RVRVERVALALLTYVEEHTDGFRILIRDSPAAITSGTY
TH_0912|M.thermoresistible__bu GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRILIRDSPAAITSGTY
MMAR_4466|M.marinum_M GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTY
MUL_4635|M.ulcerans_Agy99 GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTY
Mb1047|M.bovis_AF2122/97 GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTY
Rv1019|M.tuberculosis_H37Rv GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTY
MAV_1159|M.avium_104 GITSSLTNNRS-RVRVERVALALLTYVEERTDGFRIMIRDSPAAISSGTY
MAB_1149|M.abscessus_ATCC_1997 GITSSLTSYRS-RVRLEQVALALLSYIEERTDGFRILIRDSPPGVSSGTY
MLBr_00815|M.leprae_Br4923 SVQQALRTTTNNRQRLHAAVQAFFDFIEHDGQGYRLIFENDNITEPR-VA
.: .:* . * *:. .. *:: ::*. :*:*:::.:. . .
Mflv_1947|M.gilvum_PYR-GCK STLLNDAVSQVESILAGDFSRRGLDPDLAPLYAQALVGSVSMAAQWWLDV
Mvan_4778|M.vanbaalenii_PYR-1 STLLNDAVSQVASILAGDFSRRGLDPDLAPLYAQALVGSVSMAAQWWLDV
MSMEG_5424|M.smegmatis_MC2_155 ATLLNDAVNQVSSILAGDFSRRGLDPDLAPLYAQALVGSVSMTAQWWLDV
TH_0912|M.thermoresistible__bu STLLNDAVNQVSSILAGDFSRRGLDPEMAPLYAQALVGSVSMTAQWWLDV
MMAR_4466|M.marinum_M SSLLNDAVSQVSSILAGDFARRGLDSELAPLYAQALVGSVSMTAQWWLDA
MUL_4635|M.ulcerans_Agy99 SSLLNDAVSQVSSILAGDFARRGLDSELAPLYAQALVGSVSMTAQWWLDA
Mb1047|M.bovis_AF2122/97 SSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDA
Rv1019|M.tuberculosis_H37Rv SSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDA
MAV_1159|M.avium_104 SSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDT
MAB_1149|M.abscessus_ATCC_1997 SSLLNDAVSQVSSILAGDFQRRGLDAEMAPLYAQALVGQVSMTAQWWLDA
MLBr_00815|M.leprae_Br4923 AQVRVATESCIDAVFALISADSRLDPHRARMVAVGLVGISVDCARYWLDT
: : : . : :::* **.. * : * .*** *::***.
Mflv_1947|M.gilvum_PYR-GCK REPK-KEVVAAHLVNLCWNGLTHLESDPVLHEE
Mvan_4778|M.vanbaalenii_PYR-1 REPK-KEVVAAHLVNLCWNGLTHLESDPVLHEE
MSMEG_5424|M.smegmatis_MC2_155 REPS-KEVVAAHVVNLAWNGLTHLESNPVLHEE
TH_0912|M.thermoresistible__bu REPK-KEVVAAHLVNLCWNGLTHLEPDPVLHEE
MMAR_4466|M.marinum_M REPK-KEVVAAHLVNLVWNGLTHLEADPQLQDE
MUL_4635|M.ulcerans_Agy99 REPK-KEVVAAHLVNLVWNGLTHLEADPQLQDE
Mb1047|M.bovis_AF2122/97 REPK-KEVVAAHLVNLVWNGLTHLEADPRLQDE
Rv1019|M.tuberculosis_H37Rv REPK-KEVVAAHLVNLVWNGLTHLEADPRLQDE
MAV_1159|M.avium_104 REPK-KEVVAAHLVNLMWNGLTHLEADPRLQDE
MAB_1149|M.abscessus_ATCC_1997 REPK-KEVVAAHIVNLCWHGLKHLEADPQLHEE
MLBr_00815|M.leprae_Br4923 NRPISKSDAVEGTVQFAWGGLSHVPLTRL----
..* *. .. *:: * **.*: