For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQLMEAAQEVSDTIVVAVPASFAGETSDMLASRV STFVAWLNGNAENAGLIARVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALEAD YDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYCMDRRDSVNSFDSSSSSDSLYESIDNLYDSV AQSEEHGSDSMSQSYNTCGSVAQSELCDSPFGTPSQSSQSNDLSATSLTQQLGGLDSIISSASASLLTTN SISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTAVSVDVAASKVVAGVGQAVSVGALRVPENWA TASQPVMATAHSVPAGCSAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_00411 | - | - | 100% (408) | serine-rich antigen |
| M. leprae Br4923 | MLBr_01182 | - | 1e-43 | 31.48% (413) | PPE-family protein |
| M. leprae Br4923 | MLBr_01828 | PPE | 5e-18 | 29.53% (193) | PPE-family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1228 | PPE18 | 1e-31 | 27.97% (379) | PPE family protein |
| M. gilvum PYR-GCK | Mflv_0325 | - | 6e-14 | 27.75% (173) | PPE protein |
| M. tuberculosis H37Rv | Rv1196 | PPE18 | 1e-32 | 27.97% (379) | PPE family protein |
| M. abscessus ATCC 19977 | MAB_4783 | - | 2e-18 | 31.03% (174) | PPE family protein |
| M. marinum M | MMAR_4240 | - | 3e-33 | 27.09% (406) | PPE family protein, PPE18 |
| M. avium 104 | MAV_2006 | - | 4e-27 | 27.60% (366) | PPE family protein |
| M. smegmatis MC2 155 | MSMEG_0619 | - | 8e-17 | 32.00% (175) | PPE family protein |
| M. thermoresistible (build 8) | TH_3569 | - | 1e-18 | 27.23% (224) | PUTATIVE PPE protein |
| M. ulcerans Agy99 | MUL_0947 | - | 2e-32 | 27.27% (407) | PPE family protein |
| M. vanbaalenii PYR-1 | Mvan_0415 | - | 1e-15 | 30.00% (170) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE
TH_3569|M.thermoresistible__bu ---------MMTAPIWMALPPEVHSALLSSGPGPGSLLAAASAWHALSAE
Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE
Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE
MAB_4783|M.abscessus_ATCC_1997 ----------MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTE
Mb1228|M.bovis_AF2122/97 ------------MVDFGALPPEINSARMYAGPGSASLVAAAQMWDSVASD
Rv1196|M.tuberculosis_H37Rv ------------MVDFGALPPEINSARMYAGPGSASLVAAAQMWDSVASD
MMAR_4240|M.marinum_M -------------MDFGSLPPEINSAKMYAGAGSGSILVAAEAWDSVAVD
MUL_0947|M.ulcerans_Agy99 -------------MDFGSLPPEFNSGKMYAGAGSGSILVAAEAWDSVAVD
MAV_2006|M.avium_104 -------------MHFAVLPPEVNSGRMYSGPGSGSMLAAASAWDELANE
MLBr_00411|M.leprae_Br4923 ------------MFDFMVYSPEVNAFLMSRGPGSTPLWGAAEAWISLAEQ
: .**.:: : *.*. .: *. * :: :
MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA
TH_3569|M.thermoresistible__bu YASAAAELSSVLANVQAGSWEGPSAERYVAAHAPYLAWLTQQSANSAATA
Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA
Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA
MAB_4783|M.abscessus_ATCC_1997 YSSAANELTTTLGSVRAGVWDGASAEQYQTAHVPYLSWLHETSAVSAGVA
Mb1228|M.bovis_AF2122/97 LFSAASAFQSVVWGLTVGSWIGSSAGLMVAAASPYVAWMSVTAGQAELTA
Rv1196|M.tuberculosis_H37Rv LFSAASAFQSVVWGLTVGSWIGSSAGLMVAAASPYVAWMSVTAGQAELTA
MMAR_4240|M.marinum_M LYSAASSCQSVIWGLAFGQWVGASASLMGAAAAPYVAWLGATATRAELAA
MUL_0947|M.ulcerans_Agy99 LYSAASSCQSVIWGLAFGQWVGASASLMGAAAAPYVAWLGATATQAELAA
MAV_2006|M.avium_104 LHVTAANIESVISGLTSEPWQGPSAAAVTAAAATQVEWLTATAEQAAQTG
MLBr_00411|M.leprae_Br4923 LMEAAQEVSDTIVVAVPASFAGETSDMLASRVSTFVAWLNGNAENAGLIA
:* : : * :: : . : *: : . .
MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE
TH_3569|M.thermoresistible__bu GRHETAAAAYSTALATMPTMAELTLNKTTHAVLVATNFLGINTIPIALNE
Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE
Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE
MAB_4783|M.abscessus_ATCC_1997 AQTETAATAYSEALATMPTLGELAANHATHGALVATNFFGINTIPIAVNE
Mb1228|M.bovis_AF2122/97 AQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNLLGQNTPAIAVNE
Rv1196|M.tuberculosis_H37Rv AQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNLLGQNTPAIAVNE
MMAR_4240|M.marinum_M NQARGAAVAYESAFAATVPPALILENRLQLVTLIATNIFGQNTPAIATTE
MUL_0947|M.ulcerans_Agy99 NQARGAAVAYESAFAATVPPALILENRLQLVTLIATNIFGQNTPAIATTE
MAV_2006|M.avium_104 AQLKAAATAYESAYAMTVPPSVVAANRSRLASLVATNLLGQNTPAIAATE
MLBr_00411|M.leprae_Br4923 RVLHAVAYAFEEARAGMVPLLTVLGNIIHTMALKAINWFGQVSTTVAALE
.* *: * . . : * * . * :* : .:* *
MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVGEAGSASA
TH_3569|M.thermoresistible__bu ADYVRMWIQAATSMSTYQAVAGTAVMSAPASSPAPLLLAPGVSEAADAMA
Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVGEAGRAAA
Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVGEAGRAAA
MAB_4783|M.abscessus_ATCC_1997 ADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSPDSGAAARTAA
Mb1228|M.bovis_AF2122/97 AEYGEMWAQDAAAMFGYAAATATATATLLPFEEAPEMTSAGG--------
Rv1196|M.tuberculosis_H37Rv AEYGEMWAQDAAAMFGYAAATATATATLLPFEEAPEMTSAGG--------
MMAR_4240|M.marinum_M AEYGEMWAQDAAAMYGYAGSAAMLAETLTPFEEAPEVANAGG--------
MUL_0947|M.ulcerans_Agy99 AEYGEMWAQDAAAMYGYAGSAAMLAETLTPFEEAPEVANAGG--------
MAV_2006|M.avium_104 VAYGEMWAQDVAAMYGYAG-AAQAASRVTPFTPPQRTTNEAG--------
MLBr_00411|M.leprae_Br4923 ADYDLMWVQNSTAMTTYRDTVLRETGKMENFEPAPQLVSRYC--------
. * ** * : * * .
MSMEG_0619|M.smegmatis_MC2_155 SVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGGQ-AILDFLKDPL
TH_3569|M.thermoresistible__bu TTQQIGSQATAADSGTALNLSDLIANLLQYYQDYLDQLFGPIVDFLRDPI
Mflv_0325|M.gilvum_PYR-GCK DMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRDPI
Mvan_0415|M.vanbaalenii_PYR-1 DVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDPL
MAB_4783|M.abscessus_ATCC_1997 -------QDATKPPPIVPDPNDPIEMLLKNSQHFL-GMYRALKGLITDPV
Mb1228|M.bovis_AF2122/97 ----LLEQAAAVEEASDTAAANQLMNNVPQALQQLAQPT-QGTTPSSKLG
Rv1196|M.tuberculosis_H37Rv ----LLEQAAAVEEASDTAAANQLMNNVPQALQQLAQPT-QGTTPSSKLG
MMAR_4240|M.marinum_M ----LVNQTAAVGQAIDSAAAGQLMSNVPQALQQLAAPAPQGASTATAPK
MUL_0947|M.ulcerans_Agy99 ----LVKQTAAVGQAIDSAAAGQLMSNVPQALQQLAATAPQGASTATAPK
MAV_2006|M.avium_104 ----MGAQNASVAQAAGTSAG-HVQSAVSNSNAMSAVPNALQNLASSSSS
MLBr_00411|M.leprae_Br4923 -----MDRRDSVNSFDSSSSSDSLYESIDNLYDSVAQSEEHGSDSMSQSY
: : : :
MSMEG_0619|M.smegmatis_MC2_155 GNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPF
TH_3569|M.thermoresistible__bu GNLFQLIDDFLTNPAGALVTWWPLLFAVAYQVFTNLVGWPTWAMILASPV
Mflv_0325|M.gilvum_PYR-GCK GNTFALITDFLTNPVQALITWGPFLLAVVYQAVSWVGASILYPSLFLLPL
Mvan_0415|M.vanbaalenii_PYR-1 GNTIKLITDFLTNPAQALITWGPFLAAVAYQAVSWVGASILYPSLLLLPL
MAB_4783|M.abscessus_ATCC_1997 GTIVRIIIDFSTNPAAAIVTWTPLFYVFAYAATFAVMGTPIYAAIMGP--
Mb1228|M.bovis_AF2122/97 GLWKTVSP--HLSPISNMVSMANNHVSMTNSGVSMTNTLSSMLKGFAP-A
Rv1196|M.tuberculosis_H37Rv GLWKTVSP--HRSPISNMVSMANNHMSMTNSGVSMTNTLSSMLKGFAPAA
MMAR_4240|M.marinum_M SLLQSVTSSFSLSNLSTIVGMENTHLSMANSGASIFKTMGDSVKGFIP-S
MUL_0947|M.ulcerans_Agy99 SLLQSVTSSFSSSNLSTIVGMENTHLSMANSGASILKTMGDSVKGFIP-S
MAV_2006|M.avium_104 SSAASGLS--DFSSFLNPYNLVSLGSAFFGNGTGLIGVSG--AAGFISDA
MLBr_00411|M.leprae_Br4923 NTCGSVAQSELCDSPFGTPSQSSQSNDLSATSLTQQLGGLDSIISSAS-A
. . .
MSMEG_0619|M.smegmatis_MC2_155 LIPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAPRTDQPLAVG
TH_3569|M.thermoresistible__bu LIPLAITLGVAGLVMIADQAQP-----PAEEAAPEEDVAAP---------
Mflv_0325|M.gilvum_PYR-GCK LATTLAIVAGVGQHLLSLLNTP-PAEEAAEEPAPAQSAPSRPDQQSFPAT
Mvan_0415|M.vanbaalenii_PYR-1 VATTLAIVLGVGAYLLENLPAP-AEDAPAEEPAASSPAPTRADQPSPAIA
MAB_4783|M.abscessus_ATCC_1997 -AAGISIPLAITLASLSQMPEAPPVDAPAETVPARIDQPHAVAMGGAPAP
Mb1228|M.bovis_AF2122/97 AAQAVETAAQNGVRAMSS-LGSSLGSSGLGGGVAAN-LGRAASVGSLSVP
Rv1196|M.tuberculosis_H37Rv AAQAVQTAAQNGVRAMSS-LGSSLGSSGLGGGVAAN-LGRAASVGSLSVP
MMAR_4240|M.marinum_M ASKAAETAVEHAARNAVS-MVGGGGPAGIGGWAPQGGVGQALSVGGLKVP
MUL_0947|M.ulcerans_Agy99 ASKAAETAVEHAARNAVS-MVGGGGPAGIGGWAPQGGVGQALSVGGLKVP
MAV_2006|M.avium_104 EHKMTEPSAKSKAVAAPERLEPPAGSRSSGATTVSAGMGRASSLGGMSVP
MLBr_00411|M.leprae_Br4923 SLLTTNSISSSTASSIMPIVASQVTETLGRSQVAVEKMIQSISSTAVSVD
MSMEG_0619|M.smegmatis_MC2_155 ISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATFVP-YAVANRDPGEGF
TH_3569|M.thermoresistible__bu ----------VRAEPQNPLPLTXXX-------------------------
Mflv_0325|M.gilvum_PYR-GCK MSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATFVP-YVVAGRDPYEGF
Mvan_0415|M.vanbaalenii_PYR-1 VSAPPPPSSAAATVGTVATGTAPAPGAPAAATASFVP-YAVAGRDPGTGF
MAB_4783|M.abscessus_ATCC_1997 TASTAAP--TPTTTSPATPGSAPAP-TPPPAGAEGLG-YAVRGDGPGFGF
Mb1228|M.bovis_AF2122/97 QAWAAANQAVTPAARALPLTSLTSAAERGP--------GQMLGGLP-VGQ
Rv1196|M.tuberculosis_H37Rv QAWAAANQAVTPAARALPLTSLTSAAERGP--------GQMLGGLP-VGQ
MMAR_4240|M.marinum_M QAWAEANQSVVPAARALPISPVTGAVEGAH--------GAPLPGMP-FGQ
MUL_0947|M.ulcerans_Agy99 QAWAEANQAVVPAARALPISPVTGAVEGAH--------GAPLPGMP-FGQ
MAV_2006|M.avium_104 QGWSTAAPELRLTALQAPAAAAAPPGRPGPFGEMPLFGGAPLMGLPGRGA
MLBr_00411|M.leprae_Br4923 VAASKVVAGVGQAVSVGALRVPENWATASQP-------VMATAHSVPAGC
: .
MSMEG_0619|M.smegmatis_MC2_155 TPTLGNKSQVAAPASGVPAAASGVAASLASRRKRRRKKGAQIEERGYADA
TH_3569|M.thermoresistible__bu --------------------------------------------------
Mflv_0325|M.gilvum_PYR-GCK SPTVRDSTGAKAPAGTIPAAASGIAASAAERRKRRRRQKEEIKGRGYADA
Mvan_0415|M.vanbaalenii_PYR-1 SPTVRDSTSAKAPASGIPAAASGVAASAAERRKRRRRQKDEIAGRAYADA
MAB_4783|M.abscessus_ATCC_1997 GPTIGASTGATAHAPSSAVSAAAALACNPATGKSRRRRRRTIDDRGYRHE
Mb1228|M.bovis_AF2122/97 MGARAG--GGLSGVLRVPPRPYVMPHSPAAG-------------------
Rv1196|M.tuberculosis_H37Rv MGARAG--GGLSGVLRVPPRPYVMPHSPAAG-------------------
MMAR_4240|M.marinum_M LAGNGG--NGVSGVLRVTPKAYVMPRPPAAG-------------------
MUL_0947|M.ulcerans_Agy99 LAGNGG--NGVSGVLRVTPKAYVMPRPPAAG-------------------
MAV_2006|M.avium_104 ADSRDGRSSGDAGTAGRGRRAAASHGPAGAARTASTGTTAELREITDLLG
MLBr_00411|M.leprae_Br4923 SAITTAVSGPLEGVTQPAEEVLTASVAGGSGTGGPAFNEAV---------
MSMEG_0619|M.smegmatis_MC2_155 YMDYEE-PDEDPAPQPEPRVRASERGSDAMGFTGTVTRH-DVTAAGLTTL
TH_3569|M.thermoresistible__bu --------------------------------------------------
Mflv_0325|M.gilvum_PYR-GCK YADYEELPDDGPPEQPAPRVTASTRGAGPMGFAGTVSRG-DEQAGGLTTL
Mvan_0415|M.vanbaalenii_PYR-1 YADYEPEPDDEPPVRQEPRIAATERGAGPMGFAGTVSRD-AAQAGGLTTL
MAB_4783|M.abscessus_ATCC_1997 YATMDDHTPTGP--QDPVTAVASGTGAGRLGFAGVHTATTAVEATGLSTL
Mb1228|M.bovis_AF2122/97 --------------------------------------------------
Rv1196|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4240|M.marinum_M --------------------------------------------------
MUL_0947|M.ulcerans_Agy99 --------------------------------------------------
MAV_2006|M.avium_104 KLAELRATGALTDTEFAEQKQRLLRAR-----------------------
MLBr_00411|M.leprae_Br4923 --------------------------------------------------
MSMEG_0619|M.smegmatis_MC2_155 TGDTFDDRPVTPMLPGTWDGDENPAPSPDDPEGGPRR------
TH_3569|M.thermoresistible__bu -------------------------------------------
Mflv_0325|M.gilvum_PYR-GCK AGDSFGGGPREPMLPGTWDPDATDDRHTDGRDGHDGHDGKEKP
Mvan_0415|M.vanbaalenii_PYR-1 PGDPFGGGPKAPMLPGTWDPDTEPD------ERHNHHDGKDSQ
MAB_4783|M.abscessus_ATCC_1997 DGDAEN--RTIPMLPGTWDVTDDDR------------------
Mb1228|M.bovis_AF2122/97 -------------------------------------------
Rv1196|M.tuberculosis_H37Rv -------------------------------------------
MMAR_4240|M.marinum_M -------------------------------------------
MUL_0947|M.ulcerans_Agy99 -------------------------------------------
MAV_2006|M.avium_104 -------------------------------------------
MLBr_00411|M.leprae_Br4923 -------------------------------------------