For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DLGLAGSTAVVTGGSKGMGLAVAETLAAEGAKVAVMARGRHALDAAVALLREAGAPDAVGVSVDMADAES IADGFAAVAQRWGRLNSLVHTIGPGDGDFEELDDTGWDEAFALGTMSAVRSIRNALPLLRAADWGRIVTF AAHSIQRQNPRIVAYTASKAALASITKNLSKSLAAEGILVNCVCPGTIVTASFTEALKGVLAADGLDATD PVDVMTWIDDNFHQPCDLGRAGLPEEVASITVYLASRRNGYVTGAMVNVDGGSDFI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2438 | - | - | 100% (267) | oxidoreductase, short chain dehydrogenase/reductase family protein |
M. avium 104 | MAV_1587 | - | 6e-70 | 51.87% (268) | oxidoreductase, short chain dehydrogenase/reductase family |
M. avium 104 | MAV_1891 | - | 3e-34 | 34.72% (265) | short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1385 | fabG | 8e-25 | 30.27% (261) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_4353 | - | 2e-70 | 52.99% (268) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1350 | fabG | 8e-25 | 30.27% (261) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 1e-18 | 28.14% (263) | 3-oxoacyl- |
M. abscessus ATCC 19977 | MAB_0833 | - | 1e-26 | 31.46% (267) | Short-chain dehydrogenase/reductase |
M. marinum M | MMAR_1568 | - | 1e-122 | 80.52% (267) | short-chain type dehydrogenase/reductase |
M. smegmatis MC2 155 | MSMEG_2228 | - | 3e-73 | 51.87% (268) | oxidoreductase, short chain dehydrogenase/reductase family |
M. thermoresistible (build 8) | TH_4608 | - | 4e-68 | 50.93% (269) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_0315 | fabG2 | 4e-25 | 30.74% (257) | 3-oxoacyl- |
M. vanbaalenii PYR-1 | Mvan_1991 | - | 5e-69 | 51.87% (268) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mb1385|M.bovis_AF2122/97 --------------MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVL Rv1350|M.tuberculosis_H37Rv --------------MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVL MLBr_01807|M.leprae_Br4923 MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV MUL_0315|M.ulcerans_Agy99 ---------MRPD-SSPSWCTITSVVTGGASGIGLAIARRLSADGTDVAT MAB_0833|M.abscessus_ATCC_1997 -------MNRETFSRLFDLTGRTAIVTGGTRGIGRALAEGYACAGANVVV MAV_2438|M.avium_104 --------------MDLGLAGSTAVVTGGSKGMGLAVAETLAAEGAKVAV MMAR_1568|M.marinum_M --------------MDLGFSGSKAVVTGGSKGMGLAIAETLAAEGASVAV Mflv_4353|M.gilvum_PYR-GCK --------------MDLGLRDATVVVVGGGRGMGLAAAHCFADDGARVAL Mvan_1991|M.vanbaalenii_PYR-1 --------------MDLGLRDATAVVVGGGRGMGLAAAHCFADDGARVAL TH_4608|M.thermoresistible__bu --------------MDLGFTDAAAVVVGGGRGMGLAAAQCLADDGARVAV MSMEG_2228|M.smegmatis_MC2_155 --------------MDLGFGGAAAAVVGGGRGMGFATAQCLADDGARVAV :.** *:* * .. * *. Mb1385|M.bovis_AF2122/97 GDVNL-EATEVAAKRL-GGDDVALAVRCDVTQADDVDILIRTAVERFG-G Rv1350|M.tuberculosis_H37Rv GDVNL-EATEVAAKRL-GGDDVALAVRCDVTQADDVDILIRTAVERFG-G MLBr_01807|M.leprae_Br4923 -----------THRAS-VVPDWFFGVECDVTDNDAIGAAFKAVEEHQG-P MUL_0315|M.ulcerans_Agy99 -----------LDLK---TPDGGLAFSADVTNRSQVDAALAAIRQRLG-P MAB_0833|M.abscessus_ATCC_1997 ASRKPEACTEAVERLR-SLGARALGVPTHTGDIHSLEELVRATAEEFG-G MAV_2438|M.avium_104 MARGRHALDAAVALLREAGAPDAVGVSVDMADAESIADGFAAVAQRWG-R MMAR_1568|M.marinum_M IARGKRALDSAVERLSQAGAPDAVAISADMADAASITSAFAAVSERWG-Q Mflv_4353|M.gilvum_PYR-GCK VGRTRDVLDEAAAQLRGRGSPDAVGVVADCADEAAVQRAFGELAERWNGE Mvan_1991|M.vanbaalenii_PYR-1 IGRSPEVLDGAAAQLRERGSPDAVGVVADTTDDAAVRRAFAELGERWNGE TH_4608|M.thermoresistible__bu IGRTRSMLDEAAADLARRGSPDALGIVADIRDEQQVERVFAELGERWQGE MSMEG_2228|M.smegmatis_MC2_155 IGRSKDVLETAASDLARRGSPDAIAIVADTGDAEQVERAFAEIGERWDGE ... . : : . :. Mb1385|M.bovis_AF2122/97 LDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERK Rv1350|M.tuberculosis_H37Rv LDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERK MLBr_01807|M.leprae_Br4923 VEVLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQR MUL_0315|M.ulcerans_Agy99 VTILVNAAGLDGFKRFSNITFEDWQRVIDVNLNGVFHTIQAVLPDMVAAG MAB_0833|M.abscessus_ATCC_1997 IDIVVNNAANALTEPVGAFTVDGWDKSFGVNLRGPVFLVQAALPHLVASP MAV_2438|M.avium_104 LNSLVHTIGPGD-GDFEELDDTGWDEAFALGTMSAVRSIRNALPLLRAAD MMAR_1568|M.marinum_M LNCLVHTIGPGD-GYFEELDDAAWDAAFTLGTMSGVRAIRAALPLLRAAD Mflv_4353|M.gilvum_PYR-GCK LNVLVNAVGPTVRGTFDELSDADWRQAVDEGAMGMVRCVRAALPLLRAAE Mvan_1991|M.vanbaalenii_PYR-1 LNILVNAVGPTVRGTFDELTDADWRQAVDEGAMGMVHCVRAALPLLRAAE TH_4608|M.thermoresistible__bu LNVLINTVGPAVMGTVEELSDEQWRSAVDDGVLGMVHCVRSALPLLRQAE MSMEG_2228|M.smegmatis_MC2_155 LNVLINTVGPGAAGDFEELTDGQWQEAFDAGVMGMVRCVRAALPLLRKAE : :: . . : : . . : . : Mb1385|M.bovis_AF2122/97 RGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAI Rv1350|M.tuberculosis_H37Rv RGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAI MLBr_01807|M.leprae_Br4923 FGRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVV MUL_0315|M.ulcerans_Agy99 WGRIVNISSSSTHSGTPYMTHYVAAKSAVNGLTKALALEYGPSGITVNAV MAB_0833|M.abscessus_ATCC_1997 HAAVLNVVSVGAFMFGQGVSMYSAAKAALVSYTRSAAAELASRGVRVNAL MAV_2438|M.avium_104 WGRIVTFAAHSIQRQNPRIVAYTASKAALASITKNLSKSLAAEGILVNCV MMAR_1568|M.marinum_M WARVVTLSAHSIQRQNPRLVAYTASKAALSSVTKNLSKSLAKEGILVNCV Mflv_4353|M.gilvum_PYR-GCK WARIVNFSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLARDEILVNVV Mvan_1991|M.vanbaalenii_PYR-1 WARIVNFSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLARDEILVNVV TH_4608|M.thermoresistible__bu WARIVNLSAHSTQRQSVILPAYTAAKAMVTSISKNLSLLLAKDEILVNVV MSMEG_2228|M.smegmatis_MC2_155 WARIVNFSAHSTQRQSTRLPAYTAAKAAVNSVSKNLSLLLAKDEIMVNVV . : . : * *:*: : . :: : . : .* : Mb1385|M.bovis_AF2122/97 APGLIRS--------------AMTEAMPQR----IWDQKLAEVPMGRAGE Rv1350|M.tuberculosis_H37Rv APGLIRS--------------AMTEAMPQR----IWDQKLAEVPMGRAGE MLBr_01807|M.leprae_Br4923 APGFIDT--------------EMTRAMDSK----YQEAALQAIPLGRIGA MUL_0315|M.ulcerans_Agy99 PPGFIDT--------------PMLRNAAAQGHLGDIEQNIARTPVRRIGK MAB_0833|M.abscessus_ATCC_1997 APGAIDT--------------DMVRKTPPA----EVERMANTNHLKRLGL MAV_2438|M.avium_104 CPGTIVTASFTEALKGVLAADGLDATDPVDVMTWIDDNFHQPCDLGRAGL MMAR_1568|M.marinum_M CPGTIVTASFTEQLKDLLAADGLDATNPYDVMAWIDKYFHQPCDLGRAGL Mflv_4353|M.gilvum_PYR-GCK SPGSIAS----EALVGWADSVGVDGSDPYALMAAIDEHFGHPAHLPRAGL Mvan_1991|M.vanbaalenii_PYR-1 SPGSIAS----EALLGWADSVGVDGSDPYALMAAIDEHFGHPAHLPRAGL TH_4608|M.thermoresistible__bu SPGSIAS----EALVGWADSIGVDGTDPYALMSAIDEHFGHPAHLPRAGL MSMEG_2228|M.smegmatis_MC2_155 SPGSISS----EALVGWAESVGVDGSDPYQLMAAIDEHFGHPAHLPRAGL ** * : : . : * * Mb1385|M.bovis_AF2122/97 PSEVASVAVFLASDLSSYMTGTVLDVTGGRFI-- Rv1350|M.tuberculosis_H37Rv PSEVASVAVFLASDLSSYMTGTVLDVTGGRFI-- MLBr_01807|M.leprae_Br4923 VEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH MUL_0315|M.ulcerans_Agy99 PEDIAAACAFLVSEEAGYITGQILGVNGGRNT-- MAB_0833|M.abscessus_ATCC_1997 PDEMVGTALLLTSDAGSYITGQTIIADGGLVAR- MAV_2438|M.avium_104 PEEVASITVYLASRRNGYVTGAMVNVDGGSDFI- MMAR_1568|M.marinum_M PEEVASITAYLVSRRNGYVTGATVNADGGSDFI- Mflv_4353|M.gilvum_PYR-GCK PTEIGSVVAFLASRRNSYMTGADINVDGGSDFT- Mvan_1991|M.vanbaalenii_PYR-1 PTEIGPVVAFLASRRNSYMTGANINVDGGSDFT- TH_4608|M.thermoresistible__bu PEEIGPVIAFLASRRNSYMTGANVNVDGGSDFV- MSMEG_2228|M.smegmatis_MC2_155 PSEIGPVAAFLASRRNSYMTGANINVDGGSDFT- :: *.* .*::* : . **