For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPAAESQQDDTAHRIRAESREFRIAAVGLLLASMIGPAQLYCIQGILPQIAQGLHISEGDSRLVFLAAFA GFAVGLIPISLLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVLLRGLQGVLLAGVSAILMAYIGEE FEPPAVTPAMGIYAAGNALGSLLGQMLPAWIVGGTGSWRLALGVLAVLLLVVVMISGMTLPRSKFFVPSA ISYIKESGLFLSHLSNRRLLVIYLLVFCFMGAIISIFNALPFRMESPPFNISPSVYGTFFLVILAGVFAA KASGAVAARIGIRITLLLSVVLMMAGVALLAIPTVWIIVIGAALVTAGAFAGYTCLTSLSAKIADRGRAQ ASALFLASSFTGSAMLGLIGSRVLTDTGWNGLLAYISGLMGLGFFLALTVRDTTSEDTE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2038 | - | - | 100% (409) | putative transport protein |
M. abscessus ATCC 19977 | MAB_2706c | - | 4e-57 | 31.65% (376) | putative transporter |
M. abscessus ATCC 19977 | MAB_0284c | - | 4e-16 | 23.33% (300) | major facilitator transporter |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2361c | - | 8e-10 | 21.52% (381) | integral membrane transport protein |
M. gilvum PYR-GCK | Mflv_2220 | - | 7e-14 | 22.92% (384) | Bcr/CflA subfamily drug resistance transporter |
M. tuberculosis H37Rv | Rv2459 | - | 5e-09 | 22.96% (392) | integral membrane transport protein |
M. leprae Br4923 | MLBr_01562 | - | 2e-06 | 27.22% (158) | putative transmembrane efflux protein |
M. marinum M | MMAR_3524 | - | 2e-15 | 22.02% (377) | hypothetical protein MMAR_3524 |
M. avium 104 | MAV_1539 | - | 4e-58 | 33.25% (388) | major facilitator family protein transporter |
M. smegmatis MC2 155 | MSMEG_0103 | - | 1e-48 | 30.10% (382) | major facilitator family protein transporter |
M. thermoresistible (build 8) | TH_2858 | - | 2e-08 | 29.11% (158) | PUTATIVE major facilitator superfamily MFS_1 |
M. ulcerans Agy99 | MUL_1444 | sugI | 3e-10 | 24.82% (415) | sugar-transport integral membrane protein SugI |
M. vanbaalenii PYR-1 | Mvan_4475 | - | 5e-12 | 26.17% (214) | Bcr/CflA subfamily drug resistance transporter |
CLUSTAL 2.0.9 multiple sequence alignment MAV_1539|M.avium_104 ----------------MVMPN-GPVAHQAGTRG---YRRMTAALCGAG-- MSMEG_0103|M.smegmatis_MC2_155 ----------------MVTAQPEPAVWQGHTRGSSDYRRLLAALFCAG-- MLBr_01562|M.leprae_Br4923 MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSKYPTLLPSGRF TH_2858|M.thermoresistible__bu ----------------------------------MEGANKLPTWLPSR-- Mb2361c|M.bovis_AF2122/97 -----------------------------------MNRTQLLTLIATG-- Rv2459|M.tuberculosis_H37Rv -----------------------------------MTPRQRLTVLATG-- Mflv_2220|M.gilvum_PYR-GCK ------------MSLINFMAISPDVKLKAQSPESAGPPSRTRMIIVLG-- Mvan_4475|M.vanbaalenii_PYR-1 ----------------------------------MAPPGRTRMILVLG-- MAB_2038|M.abscessus_ATCC_1997 --------------------MPAAESQQDDTAHRIRAESREFRIAAVG-- MMAR_3524|M.marinum_M ------------------------------MKASAPSRRIVAVLLCVVP- MUL_1444|M.ulcerans_Agy99 -----------------------------------MQRGILVALTAASVG MAV_1539|M.avium_104 ----------------LASFAAMYCTQALLPALSAHHRIGPATAALTVSL MSMEG_0103|M.smegmatis_MC2_155 ----------------VATFAQLYSPQAVLPLIASDLGTGAAHAALAISA MLBr_01562|M.leprae_Br4923 PSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWGITA TH_2858|M.thermoresistible__bu ---RFIAAVFAIGGMQLLATMDSTIAIVALPRIQDELNLTDAGRSWVITA Mb2361c|M.bovis_AF2122/97 -----------LG--LFMIFLDALIVNVALPDIQRSFAVGEDGLQWVVAS Rv2459|M.tuberculosis_H37Rv -----------LG--IFMVFVDVNIVNVALPSIQKVFHTGEQGLQWAVAG Mflv_2220|M.gilvum_PYR-GCK -------------LLVALGPLTIDMYLPALPKIGEELSVSSSVAQLTLTG Mvan_4475|M.vanbaalenii_PYR-1 -------------LLVALGPLTIDMYLPALPKIAEELSVSSSVAQLTLTG MAB_2038|M.abscessus_ATCC_1997 -----------LLLASMIGPAQLYCIQGILPQIAQGLHISEGDSRLVFLA MMAR_3524|M.marinum_M -----------------LNQIPMDAYTPALPQMETSIGTTATALQSTVTV MUL_1444|M.ulcerans_Agy99 ----------------LIYGYDLSIIAGAQLFITEEFGLSTHQQELLTTM : MAV_1539|M.avium_104 TTGALALSIIPASVLSERYGRTRVMLISGVASSVIGLLLPFSPSLGVLVF MSMEG_0103|M.smegmatis_MC2_155 ATIGLAFGVLPWAALADRVGRVQVITVSVVVATVLGLLVPFAPTYALLLC MLBr_01562|M.leprae_Br4923 YVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEVTLVI TH_2858|M.thermoresistible__bu YVLTFGGLMLLGGRLGDTIGRKRTFIVGVTLFTIASVLCGIAWDEATLVI Mb2361c|M.bovis_AF2122/97 YSLGMAVFIMSAATLADLYGRRRWYLIGVSLFTLGSIACGLAPSIAVLTT Rv2459|M.tuberculosis_H37Rv YSLGMAAVLMSCALLGDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTV Mflv_2220|M.gilvum_PYR-GCK TLAGLAIGQLVIGPLSDSLGRRKPLFAGIVLHMVASLLCMFAPTITVLGI Mvan_4475|M.vanbaalenii_PYR-1 TLAGLAIGQLVIGPLSDSLGRRRPLFAGIVLHMLASLLCLLAPNITVLGV MAB_2038|M.abscessus_ATCC_1997 AFAGFAVGLIPISLLSERYGRRSILLMSSTLATLICLLLVFCHDLTEIVL MMAR_3524|M.marinum_M FMIGMALSYLAVGIMSDSWGRKPVLMGCAAALTVTSLACAAANNVAMLLV MUL_1444|M.ulcerans_Agy99 VVIGQIVGALGAGVLANAIGRKKSVVMLLVAYTMFAVLGALSVSLPMLLA : . :.: ** : : : MAV_1539|M.avium_104 GRAVQGVALAGIPAVAMALLAEEVDAS-SLGSAMGRYIAGTTIGGLAGRI MSMEG_0103|M.smegmatis_MC2_155 GRFVEGLALAGVPAVAVAYLTEEINAG-HAARAAGTYVAGTTIGGLAGRL MLBr_01562|M.leprae_Br4923 ARLLQGIGSAIASPTGLALVATTFSKGSARNTATAVFAAMTAIGSVMGLV TH_2858|M.thermoresistible__bu ARLLQGVGAAIASPTGLALVATTFPKGPARNAATAVFAAMTGVGSVMGLV Mb2361c|M.bovis_AF2122/97 ARGAQGLGAAAVSVTSLALVSAAFPEAKEKARAIGIWTAIASIGTTTGPT Rv2459|M.tuberculosis_H37Rv ARVIQGLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGAASAPA Mflv_2220|M.gilvum_PYR-GCK ARGLQGMGAAAGMVVAIAVVGDLYKDN-AAATVMSRLMLVLGVAPVLAPS Mvan_4475|M.vanbaalenii_PYR-1 ARCLQGMGAAAGMVVAIAVVGDLYKDN-VAATVMSRLMLVLGVAPVLAPS MAB_2038|M.abscessus_ATCC_1997 LRGLQGVLLAGVSAILMAYIGEEFEPP-AVTPAMGIYAAGNALGSLLGQM MMAR_3524|M.marinum_M LRFLQGGACSAFIVVAIAIAADCFEGA-RLRSVNGLLGAAWSAAPILAPA MUL_1444|M.ulcerans_Agy99 ARFLLGLAVGVSIVVVPVYVAESAPAA-VRGSLLTVYQLTTVSGLIVG-Y * * . . . . MAV_1539|M.avium_104 VPSVVV-QVGTWRVALLACSLITLAGTAVFAVLVPRSRFFT--------- MSMEG_0103|M.smegmatis_MC2_155 VTGPVA-EFAGWRVGVLTVALLCGMAALAFVKLAPAAQGFT--------- MLBr_01562|M.leprae_Br4923 VGGALT-EVS-WRLAFLVNVPIGLVMIYLARTALHETHKER-MKLDAAGA TH_2858|M.thermoresistible__bu VGGALT-EVS-WRLAFLVNVPIGLLVIYLARRTLRETHRER-LKLDAAGA Mb2361c|M.bovis_AF2122/97 LGGLLV-DQWGWRSIFYVNLPMGALVLFLTLCYVEESCNERARRFDLSGQ Rv2459|M.tuberculosis_H37Rv LGGLMV-DGLGWRSVFLVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQ Mflv_2220|M.gilvum_PYR-GCK LGAAVL-LHGSWHWVFAALVVVAAALLVMAVLALPETLPVD--------- Mvan_4475|M.vanbaalenii_PYR-1 FGAAVL-LHGSWHWVFAALVVVAGALLVMSVLALPETLPAD--------- MAB_2038|M.abscessus_ATCC_1997 LPAWIVGGTGSWRLALGVLAVLLLVVVMISGMTLPRSKFFV--------- MMAR_3524|M.marinum_M VGGFIV-EYASWRYVFVLIAALSVVVGLAVTWALPETLDQE--------- MUL_1444|M.ulcerans_Agy99 LTGYLLAGTHSWRWMLGLATVPAMLLLPLLIRMPDTPRWYVMKG------ . . : *: . . MAV_1539|M.avium_104 ------------------------------------------PKPASVRA MSMEG_0103|M.smegmatis_MC2_155 ------------------------------------------PARTHWDL MLBr_01562|M.leprae_Br4923 ILATLACTAAVFAFSMGPEKGWISLTTIGSG-LVALVAAIAFAVVERTAE TH_2858|M.thermoresistible__bu ILATLGCTAAVFAFSMGPERGWASVITIATG-AAALVFLLAFLYVERTAD Mb2361c|M.bovis_AF2122/97 LLFIVAVGALVYAVIEGPQIGWTSVQTIVMLWTAA-VGCALFVWLERRSS Rv2459|M.tuberculosis_H37Rv LTLIPAVALIAYTIIEAPRFDRQSAGFVAALLLAAGVLLWLFVRHEHRAA Mflv_2220|M.gilvum_PYR-GCK -----------------------------------------HRRPLKVRG Mvan_4475|M.vanbaalenii_PYR-1 -----------------------------------------HRRPLKARG MAB_2038|M.abscessus_ATCC_1997 ------------------------------------------PSAISYIK MMAR_3524|M.marinum_M -----------------------------------------SRTRFELGQ MUL_1444|M.ulcerans_Agy99 ---------------RIQEARAALLRVDPAADVEEELAEIGTALSEGSGG MAV_1539|M.avium_104 ALRNLAGHLRNPVLAKLFAVGFVLMGGFVTVYNYLGYRLAARPFGLAPSV MSMEG_0103|M.smegmatis_MC2_155 GRR-LLTNLRSPRQLALFAQGFLLMGGFVAVYNFLGFRLSAAPFNLPQTV MLBr_01562|M.leprae_Br4923 NPVVPFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIGLYIQD-ILGYSALR TH_2858|M.thermoresistible__bu NPVVPFSLFRDRNRVATFGAIFLAGGVMFTLTVLIGLYVQD-IMGYSPLR Mb2361c|M.bovis_AF2122/97 NPMMDLTLFRDTSYALAIATICTVFFAVYGMLLLTTQFLQN-VRGYTPSV Rv2459|M.tuberculosis_H37Rv FPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVITQHFQN-VRDLSPLH Mflv_2220|M.gilvum_PYR-GCK IAATYLELVRDARFVILVLVAALGMSGLFAYIAGASFVLQG-RFGLDQTA Mvan_4475|M.vanbaalenii_PYR-1 IALTYLELLRDVRFVILVFVGALGMSGLFAYIAGASFVLQG-RFGLDQTA MAB_2038|M.abscessus_ATCC_1997 ESGLFLSHLSNRRLLVIYLLVFCFMGAIISIFNALPFRMESPPFNISPSV MMAR_3524|M.marinum_M TWQVLTATARNRVFLALAAIFGLLAGPQLSFGVAAPFLYQD-EMGFSPSA MUL_1444|M.ulcerans_Agy99 VSEMLRPPFLRATIFVITLGFLIQITGINAIIYYSPRIFEAMGFTGDFAL MAV_1539|M.avium_104 VGLLFLLYLVGTGTS-VVAGRLADRRGRPLVLGAALPIAVAGLLLTVPPS MSMEG_0103|M.smegmatis_MC2_155 VSLVFLAYLAGTWAS-ARAGAEATRFGRKPVLLVSIATMIAGVAVTMSTN MLBr_01562|M.leprae_Br4923 AGIGFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWLLMVAMLYGWAFM TH_2858|M.thermoresistible__bu AGIGFIPFVIALGIGLAASSQLVRLFPPRVLVFGGGVLVLGAMLYG-STL Mb2361c|M.bovis_AF2122/97 TGLMILPFSAAVAIVSPLVGHLVGRIGARVPILAGLCMLMLGLLMLIFSE Rv2459|M.tuberculosis_H37Rv AGLMMLPVPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFAISM Mflv_2220|M.gilvum_PYR-GCK FALVFGAGAVALIGTTQCNVILLKRFTPQQIMVWALAASSVFGLVFVALA Mvan_4475|M.vanbaalenii_PYR-1 FALVFGAGAIALIGTTQFNVVLLKRFAPQQIMVWALVAASLSGAVFVALA MAB_2038|M.abscessus_ATCC_1997 YGTFFLVILAGVFAA-KASGAVAARIGIRITLLLSVVLMMAGVALLAIPT MMAR_3524|M.marinum_M YGLIALVVGVAVLLGSFSTGMLATRMAFRRLAFADWTLYMVGAALLLGSA MUL_1444|M.ulcerans_Agy99 LGLPALVQIAG-VAAVITSLLLVDRVGRRPILLSGIAIMIVADVALMAVF . . MAV_1539|M.avium_104 LAAI------VAGVGVFTGGF-FAAHTV-ASGWVGAVAQRDRAEASALYL MSMEG_0103|M.smegmatis_MC2_155 AVVV------LVGLVIATAGF-FGAHAI-ASGWVGAEAGDSKAQASALYN MLBr_01562|M.leprae_Br4923 NRGVPYFPNLLAPIVVGGIGIGMAVVPL-TLSAIAGVGFDRIGPVSAIAL TH_2858|M.thermoresistible__bu HADIPYFPNLVVPIVVGGIGIGVIVVPL-TVSAIAGVGFDQIGPVSAIAL Mb2361c|M.bovis_AF2122/97 HRSS---ALVLVGLGLCGSGVALCLTPI-TTVAMTAVPAERAGMASGIMS Rv2459|M.tuberculosis_H37Rv DHAH---PVALVGLTIFGAGAGGCATPL-LHLGMTKVDDGRAGMAAGMLN Mflv_2220|M.gilvum_PYR-GCK AAGVGGVFGFVIPVWAILAAMGLVIPNA-PAVALTRHP-DAAGTAAALLG Mvan_4475|M.vanbaalenii_PYR-1 AAHIGGLWGFVIPVWAILAAMGLVIPNA-PAVALTRHP-DAAGTAAALLG MAB_2038|M.abscessus_ATCC_1997 VWII------VIGAALVTAGA-FAGYTC-LTSLSAKIADRGRAQASALFL MMAR_3524|M.marinum_M PVVGVNPWAITLAVSLAVAGCGALVPQA-QAAALGAFS-RNLGLVSGLFG MUL_1444|M.ulcerans_Agy99 ARGQGAAILGFAGILLFIIGYTMGFGSLGWVYASESFPTRLRSIGSSTML . . :. MAV_1539|M.avium_104 FSYYLGGSVAGAFGGVLYGVGG---------------------------- MSMEG_0103|M.smegmatis_MC2_155 LFYYGGSSAVGWLGGLAFDAAG---------------------------- MLBr_01562|M.leprae_Br4923 MLQSLGGPLVLAVIQAVITSRT------LYLGGTTGPVK-------FMND TH_2858|M.thermoresistible__bu MLQNLGGPLVLAVVQAVITSRT------LYLGGTTGPVQ-------NMDT Mb2361c|M.bovis_AF2122/97 AQRAIGSTIGFAVLGSVLAAWLSATLEPHLERAVPDPVQRHVLAEIIIDS Rv2459|M.tuberculosis_H37Rv LQRSLGGIFGVAFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDS Mflv_2220|M.gilvum_PYR-GCK AVQFGGGAAIAPVVGVLG-------------------------------- Mvan_4475|M.vanbaalenii_PYR-1 AVQFGMGAAIAPVVGVLG-------------------------------- MAB_2038|M.abscessus_ATCC_1997 ASSFTGSAMLGLIGSRVLTDTG---------------------------- MMAR_3524|M.marinum_M TLTYLIIAAIMAIVGVSPERTQ---------------------------- MUL_1444|M.ulcerans_Agy99 TANLIANAIVAAVFLTMLHSLG---------------------------- . MAV_1539|M.avium_104 ---------------WSATVCFVVVLLMAGAALVALLVRDNGFRIGRRVV MSMEG_0103|M.smegmatis_MC2_155 ---------------WSA----VAGTVMGLAALAGLIA----FALAR--- MLBr_01562|M.leprae_Br4923 AQLRALDHGYTYGLLWVAG---AVVIVGVAALFIGYTPEQVAYAQEVKEA TH_2858|M.thermoresistible__bu AQLHALDQGYTYGLLWVAA---VAVLVGGAALFIGYTAKQVAHAQEVKDA Mb2361c|M.bovis_AF2122/97 ANPRAHVGGIVPRRHIEHR---DPVAIAEEDFIEGIRVALLVATATLAVV Rv2459|M.tuberculosis_H37Rv ANPHAHAAFIGPGHRITAAQEDEIVLAADAVFVSGIKLALGGAAVLLTGA Mflv_2220|M.gilvum_PYR-GCK ------NDELAMAVVMAAG----VIIALGALLVTGAHRNTEPARVPDEAV Mvan_4475|M.vanbaalenii_PYR-1 ------NDELAMAVVMAAG----VIVALTALLVTGVHRNTAPAAVPGEAV MAB_2038|M.abscessus_ATCC_1997 -------------------------WNGLLAYISGLMGLGFFLALTVRDT MMAR_3524|M.marinum_M ------------------------APLGWLYVLCGALVFAALAWVTPRVQ MUL_1444|M.ulcerans_Agy99 --------------GSGAFAVFGVLALVAFGVVYRYAPETKGRQLEEIRH . MAV_1539|M.avium_104 AGVASVK-------------------------- MSMEG_0103|M.smegmatis_MC2_155 --------------------------------- MLBr_01562|M.leprae_Br4923 VDAGEL--------------------------- TH_2858|M.thermoresistible__bu IDAGEL--------------------------- Mb2361c|M.bovis_AF2122/97 FLAGWRWFPRDVQTAGSDAKREAAYSDDRRVRG Rv2459|M.tuberculosis_H37Rv FVLGWTRFPRTPAS------------------- Mflv_2220|M.gilvum_PYR-GCK AEPA----------------------------- Mvan_4475|M.vanbaalenii_PYR-1 AEPA----------------------------- MAB_2038|M.abscessus_ATCC_1997 TSEDTE--------------------------- MMAR_3524|M.marinum_M GEKPTPG-------------------------- MUL_1444|M.ulcerans_Agy99 FWENGGRWPEKLTEAP-----------------