For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTRRQRASRGSGDRLRDEIIDAAIALVLETKELRAPSIREVARKIGVTPPSIYLHFADKDELMDAVCGQY FQRLNDKMVEAARGDITALERLHAQGMAYVRFAIATPLMYRLATVTQPEGELDETMASAAFAHLHNGVKE LVTEGLYPEGDTVAMALQLWVAAHGVASMLVTKPHLPWGDPEEFASEVLRAACLGQAVSDIDLTEVLPRQ K
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1288 | - | - | 100% (211) | TetR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4510c | - | 3e-55 | 52.50% (200) | TetR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0499 | - | 5e-10 | 32.14% (140) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0672c | - | 1e-06 | 28.32% (173) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2132 | - | 1e-60 | 53.27% (199) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0653c | - | 1e-06 | 28.32% (173) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00815 | - | 1e-07 | 29.75% (121) | putative TetR-family transcriptional regulator |
M. marinum M | MMAR_4304 | - | 5e-55 | 52.24% (201) | TetR family transcriptional regulator |
M. avium 104 | MAV_0603 | - | 6e-08 | 26.77% (127) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_5177 | - | 5e-61 | 52.86% (210) | regulatory protein, TetR |
M. thermoresistible (build 8) | TH_4347 | - | 1e-10 | 27.06% (170) | PUTATIVE transcriptional regulator, TetR family |
M. ulcerans Agy99 | MUL_0990 | - | 3e-54 | 51.74% (201) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_4572 | - | 1e-60 | 51.90% (210) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb0672c|M.bovis_AF2122/97 ---------------------------------MTSQTGVRDELLHAGVR Rv0653c|M.tuberculosis_H37Rv ---------------------------------MTSQTGVRDELLHAGVR TH_4347|M.thermoresistible__bu ----------------------------------VTADDIREKLVDAGVR Mflv_2132|M.gilvum_PYR-GCK ---------------MSEHGV------RRRRAPRGAGEHLRDEILDAATE Mvan_4572|M.vanbaalenii_PYR-1 ------------MADVSAPRQ------RRHRAPRGAGEQLRAEILDAATD MSMEG_5177|M.smegmatis_MC2_155 -----------MSTPNSHPGANSPCPIKRRRARRGSGELLREEILDATTD MMAR_4304|M.marinum_M ---------------MSMGRL------RRARAPRGSGDLLRHEILDAATE MUL_0990|M.ulcerans_Agy99 --------------------M------RRARAPRGSGDLLRHEILDAATE MAB_1288|M.abscessus_ATCC_1997 ---------------MT----------RRQRASRGSGDRLRDEIIDAAIA MLBr_00815|M.leprae_Br4923 MNNLAKAAQRRTVRPIDRGRLSDDIATPNQRSNRLSRDKRRGQLLIVASD MAV_0603|M.avium_104 --------------------------------MTGPANSRRDELLELAAA . * ::: Mb0672c|M.bovis_AF2122/97 LLDDHG-PDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD Rv0653c|M.tuberculosis_H37Rv LLDDHG-PDALQTRKVAAAAGTSTMAVYTHFGGMRGLIAAIAEEGLRQFD TH_4347|M.thermoresistible__bu LLERDG-VQALSARNLAAEAGTSTMAVYTRFGGMPGVLEAVAGEIFARFA Mflv_2132|M.gilvum_PYR-GCK LLLESGDEKAVSVRSVAERVGVTPPSLYLHFADKNALLDAVCGRYFEKLD Mvan_4572|M.vanbaalenii_PYR-1 LLLETGDEKAVSIRSVAQRVGVTPPSIYLHFVDKTALLDAVCGRYFEKLD MSMEG_5177|M.smegmatis_MC2_155 LLLETGHAKDVSIRAVAKRVGVTPPSIYLHFADKDALLDAVCARYFEKLD MMAR_4304|M.marinum_M LLLQTRQARAVSIRSVAERVGVTPPSIYLHFQDKDALLDAVCARYLARLD MUL_0990|M.ulcerans_Agy99 LLLQTRQARAVSIRSVAERVGVTSPSIYLHFQDKDALLDAVCARYLARLD MAB_1288|M.abscessus_ATCC_1997 LVLETKELRAPSIREVARKIGVTPPSIYLHFADKDELMDAVCGQYFQRLN MLBr_00815|M.leprae_Br4923 VFVDHG-YHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLERHMNNLV MAV_0603|M.avium_104 MFAERG-LRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLRSFLDWLF :. :* * :* :* . : : : : Mb0672c|M.bovis_AF2122/97 VALT-VPQTADPVADLL-AIGTAYRRYAIERPHMYRLMFGSTSAHGIN-V Rv0653c|M.tuberculosis_H37Rv VALT-VPQTADPVADLL-AIGTAYRRYAIERPHMYRLMFGSTSAHGIN-V TH_4347|M.thermoresistible__bu DALTQIPQTGDPVADFL-LMGAAYREYALTHPQRYLLMFGTATPASIAGS Mflv_2132|M.gilvum_PYR-GCK EQMQAVAAACPSTIEVLRAQGLAYVRFALQTPELYRIATMGHGNPGSG-- Mvan_4572|M.vanbaalenii_PYR-1 EEMQEVAGAAATALDVLRAQGMAYVRFALKNPVLYRIAMMGPGSPGSD-- MSMEG_5177|M.smegmatis_MC2_155 QQMQRVAAGQPSTIDVLRAQGLAYVEFATHTPELYRLATMAEGRPGSD-- MMAR_4304|M.marinum_M EEMERAAMGHTCVVEVLRAQGLAYVRFALQTPELYRLATMGEWRSGSN-- MUL_0990|M.ulcerans_Agy99 EEMERAAMGHTCVVEVLRAQGLAYVRFALQTPELYRLATMGEWRSGSN-- MAB_1288|M.abscessus_ATCC_1997 DKMVEAARGDITALERLHAQGMAYVRFAIATPLMYRLATVTQ--PEGE-- MLBr_00815|M.leprae_Br4923 SSVQQALRTTTNNRQRLHAAVQAFFDFIEHDGQGYRLIFENDNITEPR-- MAV_0603|M.avium_104 ARYREIIDSESNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQ-- : * * : Mb0672c|M.bovis_AF2122/97 PARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVA Rv0653c|M.tuberculosis_H37Rv PARDVLTLKVAEIEHQHPSFAHVVRAVHRCLLAGRFATALGADDDTAIVA TH_4347|M.thermoresistible__bu RADLTATGEVSDRTEWAASFEALRTMVRRMIAAGRIR-------DDGEAA Mflv_2132|M.gilvum_PYR-GCK ----------VDLTLNSAAFVHMRASVEALIAEGVYP-------PGDPTV Mvan_4572|M.vanbaalenii_PYR-1 ----------VDVALNSSAFGHLLMSVQALIAEGVYP-------QADPTM MSMEG_5177|M.smegmatis_MC2_155 ----------VDITLNSSAFQHMRATIEKLMDEGIYP-------PGDATT MMAR_4304|M.marinum_M ----------VDSALDSSAFRHMCASVQAMMDEGIYR-------ADDPTT MUL_0990|M.ulcerans_Agy99 ----------VDSALDSSAFRHMCASVQAMMDEGIYR-------ADDPTT MAB_1288|M.abscessus_ATCC_1997 ----------LDETMASAAFAHLHNGVKELVTEGLYP-------EGDTVA MLBr_00815|M.leprae_Br4923 ----------VAAQVRVATESCIDAVFALISADSRLD-------PHRARM MAV_0603|M.avium_104 ------PRFSYIEDMNRQQRKMWLEVLNQGVDEGYFR-------PDLDVD . . Mb0672c|M.bovis_AF2122/97 TAAQFWSQIHGFVMLELAG---FYGDRGAAVEPVLAAMTVNLLVALGDSP Rv0653c|M.tuberculosis_H37Rv TAAQFWSQIHGFVMLELAG---FYGDRGAAVEPVLAAMTVNLLVALGDSP TH_4347|M.thermoresistible__bu IAGRLWSLIHGEVMLELAG---FFGAEGHGLTKILTPMTVDMLVGLGDDR Mflv_2132|M.gilvum_PYR-GCK FALELWTCAHGIAAQLISRPYLPWGDVEQFADRVLRAVCIGHMVSVAIGP Mvan_4572|M.vanbaalenii_PYR-1 LALELWTAVHGIAAMLISRPYLPWGGAEEFADRLMRAVCCGQALSVAIRP MSMEG_5177|M.smegmatis_MC2_155 WALELWTAAHGVAAMLIAKPYLPWGDTHEFADRVLRAVCSGHIVSGIIGN MMAR_4304|M.marinum_M IALELWTAAHGVAALLIAKPHLPFGDVAAFADRVLGAVLCGHMVAGLVGP MUL_0990|M.ulcerans_Agy99 IALELWTAAHGVAALLIAKPHLPFGDVAAFADRVLGAVLCGHMVAGLVGP MAB_1288|M.abscessus_ATCC_1997 MALQLWVAAHGVASMLVTKPHLPWGDPEEFASEVLRAACLGQAVS----- MLBr_00815|M.leprae_Br4923 VAVGLVGISVDCARYWLDTN---------------RPISKSDAVEGTVQF MAV_0603|M.avium_104 LVYRFIRDTTWVSVRWYQPG---------------GPLTAEQVGQQYLAI . : . Mb0672c|M.bovis_AF2122/97 ERAQCSLRAEQTQKNTLGRAT- Rv0653c|M.tuberculosis_H37Rv ERAQCSLRAEQTQKNTLGRAT- TH_4347|M.thermoresistible__bu ARVEASL---TTAAEAHGR--- Mflv_2132|M.gilvum_PYR-GCK DENAMDTVNWLKEVVDERRRR- Mvan_4572|M.vanbaalenii_PYR-1 DESPREIMTWLKEVVDERQRG- MSMEG_5177|M.smegmatis_MC2_155 DVTPSEAVARLKGLADAPN--- MMAR_4304|M.marinum_M QATSRDLMDWVVQHRPSEESRV MUL_0990|M.ulcerans_Agy99 QATSRDLMDWVVQHRPSEESRV MAB_1288|M.abscessus_ATCC_1997 DIDLTEVLPRQK---------- MLBr_00815|M.leprae_Br4923 AWGGLSHVPLTRL--------- MAV_0603|M.avium_104 VLGGITVDAKKD----------